RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 SCYL3Q8IZE3 742 aa29.4■■■□□ 2.3
SDF2L1-201ENST00000248958 IFNL1Q8IU54 200 aa29.39■■■□□ 2.3
SDF2L1-201ENST00000248958 OTUD7AQ8TE49 926 aaPredicted RBP29.39■■■□□ 2.3
SDF2L1-201ENST00000248958 CNKSR2Q8WXI2 1034 aa29.39■■■□□ 2.3
SDF2L1-201ENST00000248958 PICK1Q9NRD5 415 aa29.39■■■□□ 2.3
SDF2L1-201ENST00000248958 TSKSQ9UJT2 592 aa29.39■■■□□ 2.3
SDF2L1-201ENST00000248958 SIPA1L1O43166 1804 aa29.38■■■□□ 2.29
SDF2L1-201ENST00000248958 CAPN15O75808 1086 aa29.38■■■□□ 2.29
SDF2L1-201ENST00000248958 ZFYP08048 801 aaPredicted RBP29.38■■■□□ 2.29
SDF2L1-201ENST00000248958 IRX6P78412 446 aaPredicted RBP29.38■■■□□ 2.29
SDF2L1-201ENST00000248958 MS4A4AQ96JQ5 239 aa29.38■■■□□ 2.29
SDF2L1-201ENST00000248958 CFHR5Q9BXR6 569 aa29.38■■■□□ 2.29
SDF2L1-201ENST00000248958 STAP2Q9UGK3 403 aa29.38■■■□□ 2.29
SDF2L1-201ENST00000248958 TTC6Q86TZ1 520 aa29.37■■■□□ 2.29
SDF2L1-201ENST00000248958 METTL16Q86W50 562 aaKnown RBP29.37■■■□□ 2.29
SDF2L1-201ENST00000248958 TRIM34Q9BYJ4 488 aa29.37■■■□□ 2.29
SDF2L1-201ENST00000248958 PALD1Q9ULE6 856 aa29.37■■■□□ 2.29
SDF2L1-201ENST00000248958 NAV1Q8NEY1 1877 aa29.37■■■□□ 2.29
SDF2L1-201ENST00000248958 CETPP11597 493 aa29.36■■■□□ 2.29
SDF2L1-201ENST00000248958 SNAPC2Q13487 334 aa29.36■■■□□ 2.29
SDF2L1-201ENST00000248958 CHD1LQ86WJ1 897 aa29.36■■■□□ 2.29
SDF2L1-201ENST00000248958 CRACR2BQ8N4Y2 399 aaPredicted RBP29.36■■■□□ 2.29
SDF2L1-201ENST00000248958 LNPKQ9C0E8 428 aa29.36■■■□□ 2.29
SDF2L1-201ENST00000248958 IRF6O14896 467 aa29.35■■■□□ 2.29
SDF2L1-201ENST00000248958 PDE1AP54750 535 aa29.35■■■□□ 2.29
SDF2L1-201ENST00000248958 NUCB1Q02818 461 aa29.35■■■□□ 2.29
SDF2L1-201ENST00000248958 B4GALNT3Q6L9W6 998 aa29.35■■■□□ 2.29
SDF2L1-201ENST00000248958 LCORLQ8N3X6 602 aa29.35■■■□□ 2.29
SDF2L1-201ENST00000248958 SAP30BPQ9UHR5 308 aaKnown RBP29.35■■■□□ 2.29
SDF2L1-201ENST00000248958 ATAD5Q96QE3 1844 aa29.34■■■□□ 2.29
SDF2L1-201ENST00000248958 CCL15-CCL14A0A0B4J2E2 113 aa29.34■■■□□ 2.29
SDF2L1-201ENST00000248958 CCL15Q16663 113 aa29.34■■■□□ 2.29
SDF2L1-201ENST00000248958 EHD4Q9H223 541 aa29.34■■■□□ 2.29
SDF2L1-201ENST00000248958 ATP8A2Q9NTI2 1148 aa29.34■■■□□ 2.29
SDF2L1-201ENST00000248958 KCNH4Q9UQ05 1017 aa29.34■■■□□ 2.29
SDF2L1-201ENST00000248958 IGF2BP3O00425 579 aaKnown RBP eCLIP29.33■■■□□ 2.29
SDF2L1-201ENST00000248958 RNF113AO15541 343 aaKnown RBP29.33■■■□□ 2.29
SDF2L1-201ENST00000248958 MBD4O95243 580 aa29.33■■■□□ 2.29
SDF2L1-201ENST00000248958 SLURP2P0DP57 97 aa29.33■■■□□ 2.29
SDF2L1-201ENST00000248958 PTPRAP18433 802 aa29.33■■■□□ 2.29
SDF2L1-201ENST00000248958 NOM1Q5C9Z4 860 aaKnown RBP29.33■■■□□ 2.29
SDF2L1-201ENST00000248958 TBC1D2Q9BYX2 928 aa29.33■■■□□ 2.29
SDF2L1-201ENST00000248958 ARMT1Q9H993 441 aa29.33■■■□□ 2.29
SDF2L1-201ENST00000248958 DDX60LQ5H9U9 1706 aaKnown RBP29.33■■■□□ 2.29
SDF2L1-201ENST00000248958 FAM196BA6NMK8 535 aa29.32■■■□□ 2.28
SDF2L1-201ENST00000248958 CXCL11O14625 94 aa29.32■■■□□ 2.28
SDF2L1-201ENST00000248958 CAP2P40123 477 aa29.32■■■□□ 2.28
SDF2L1-201ENST00000248958 APPBP2Q92624 585 aa29.32■■■□□ 2.28
SDF2L1-201ENST00000248958 ZCCHC17Q9NP64 241 aaKnown RBP29.32■■■□□ 2.28
SDF2L1-201ENST00000248958 GINM1Q9NU53 330 aa29.32■■■□□ 2.28
SDF2L1-201ENST00000248958 POLR3DP05423 398 aaPredicted RBP29.31■■■□□ 2.28
SDF2L1-201ENST00000248958 SLFNL1Q499Z3 407 aa29.31■■■□□ 2.28
SDF2L1-201ENST00000248958 BRI3BPQ8WY22 251 aa29.31■■■□□ 2.28
SDF2L1-201ENST00000248958 DDRGK1Q96HY6 314 aa29.31■■■□□ 2.28
SDF2L1-201ENST00000248958 PTPN18Q99952 460 aa29.31■■■□□ 2.28
SDF2L1-201ENST00000248958 DCP1AQ9NPI6 582 aaPredicted RBP29.31■■■□□ 2.28
SDF2L1-201ENST00000248958 SERPINB13Q9UIV8 391 aa29.31■■■□□ 2.28
SDF2L1-201ENST00000248958 TAOK2Q9UL54 1235 aa29.31■■■□□ 2.28
SDF2L1-201ENST00000248958 CASP8AP2Q9UKL3 1982 aa29.3■■■□□ 2.28
SDF2L1-201ENST00000248958 PHIPQ8WWQ0 1821 aa29.3■■■□□ 2.28
SDF2L1-201ENST00000248958 TBC1D8O95759 1140 aa29.3■■■□□ 2.28
SDF2L1-201ENST00000248958 SDR42E1Q8WUS8 393 aa29.3■■■□□ 2.28
SDF2L1-201ENST00000248958 FSD1Q9BTV5 496 aa29.3■■■□□ 2.28
SDF2L1-201ENST00000248958 PUS7LQ9H0K6 701 aaKnown RBP29.3■■■□□ 2.28
SDF2L1-201ENST00000248958 MCM9Q9NXL9 1143 aa29.3■■■□□ 2.28
SDF2L1-201ENST00000248958 ZHX2Q9Y6X8 837 aa29.3■■■□□ 2.28
SDF2L1-201ENST00000248958 EVI5LQ96CN4 794 aa29.29■■■□□ 2.28
SDF2L1-201ENST00000248958 DNAJC18Q9H819 358 aa29.29■■■□□ 2.28
SDF2L1-201ENST00000248958 CHGBP05060 677 aa29.28■■■□□ 2.28
SDF2L1-201ENST00000248958 TICAM2Q86XR7 235 aa29.28■■■□□ 2.28
SDF2L1-201ENST00000248958 AMOTL1Q8IY63 956 aa29.28■■■□□ 2.28
SDF2L1-201ENST00000248958 AFG3L2Q9Y4W6 797 aa29.28■■■□□ 2.28
SDF2L1-201ENST00000248958 ASNSP08243 561 aa29.27■■■□□ 2.28
SDF2L1-201ENST00000248958 OSBPL3Q9H4L5 887 aa29.27■■■□□ 2.28
SDF2L1-201ENST00000248958 SLC4A4Q9Y6R1 1079 aa29.27■■■□□ 2.28
SDF2L1-201ENST00000248958 GPR25O00155 361 aa29.26■■■□□ 2.27
SDF2L1-201ENST00000248958 TATDN1Q6P1N9 297 aa29.26■■■□□ 2.27
SDF2L1-201ENST00000248958 AS3MTQ9HBK9 375 aa29.26■■■□□ 2.27
SDF2L1-201ENST00000248958 USP17L5A8MUK1 530 aa29.25■■■□□ 2.27
SDF2L1-201ENST00000248958 PRKAB2O43741 272 aa29.25■■■□□ 2.27
SDF2L1-201ENST00000248958 GNAT2P19087 354 aa29.25■■■□□ 2.27
SDF2L1-201ENST00000248958 PLCD1P51178 756 aa29.25■■■□□ 2.27
SDF2L1-201ENST00000248958 SLC4A8Q2Y0W8 1093 aa29.25■■■□□ 2.27
SDF2L1-201ENST00000248958 FASTKD5Q7L8L6 764 aaKnown RBP29.25■■■□□ 2.27
SDF2L1-201ENST00000248958 OSBP2Q969R2 916 aa29.25■■■□□ 2.27
SDF2L1-201ENST00000248958 STRBPQ96SI9 672 aaKnown RBP29.25■■■□□ 2.27
SDF2L1-201ENST00000248958 PTPRFP10586 1907 aa29.25■■■□□ 2.27
SDF2L1-201ENST00000248958 BAZ2AQ9UIF9 1905 aaKnown RBP29.25■■■□□ 2.27
SDF2L1-201ENST00000248958 RRP1BQ14684 758 aaKnown RBP29.24■■■□□ 2.27
SDF2L1-201ENST00000248958 ANKRD23Q86SG2 305 aa29.24■■■□□ 2.27
SDF2L1-201ENST00000248958 PLEKHM2Q8IWE5 1019 aa29.24■■■□□ 2.27
SDF2L1-201ENST00000248958 FAM43AQ8N2R8 423 aa29.24■■■□□ 2.27
SDF2L1-201ENST00000248958 ZFYVE28Q9HCC9 887 aa29.24■■■□□ 2.27
SDF2L1-201ENST00000248958 A0A0G2JLL6 359 aaPredicted RBP29.23■■■□□ 2.27
SDF2L1-201ENST00000248958 BTBD19C9JJ37 291 aa29.23■■■□□ 2.27
SDF2L1-201ENST00000248958 TAF1CQ15572 869 aaPredicted RBP29.23■■■□□ 2.27
SDF2L1-201ENST00000248958 GIMAP6Q6P9H5 292 aa29.23■■■□□ 2.27
SDF2L1-201ENST00000248958 PRRT2Q7Z6L0 340 aaPredicted RBP29.23■■■□□ 2.27
SDF2L1-201ENST00000248958 GPAA1O43292 621 aa29.22■■■□□ 2.27
SDF2L1-201ENST00000248958 GABPAQ06546 454 aa29.22■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms