RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 USP17L12C9JPN9 530 aa18.23■□□□□ 0.51
LRFN1-201ENST00000248668 USP17L21D6R901 530 aa18.23■□□□□ 0.51
LRFN1-201ENST00000248668 NR5A1Q13285 461 aa18.23■□□□□ 0.51
LRFN1-201ENST00000248668 SMAP1Q8IYB5 467 aaPredicted RBP18.23■□□□□ 0.51
LRFN1-201ENST00000248668 MECOMQ03112 1051 aa18.22■□□□□ 0.51
LRFN1-201ENST00000248668 MAP7D2Q96T17 732 aa18.22■□□□□ 0.51
LRFN1-201ENST00000248668 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.22■□□□□ 0.51
LRFN1-201ENST00000248668 A0A1W2PQ27 194 aa18.22■□□□□ 0.51
LRFN1-201ENST00000248668 A0A1W2PQ64 194 aa18.22■□□□□ 0.51
LRFN1-201ENST00000248668 A0A1W2PQD8 194 aa18.22■□□□□ 0.51
LRFN1-201ENST00000248668 SLC39A14Q15043 492 aa18.22■□□□□ 0.51
LRFN1-201ENST00000248668 DIS3L2Q8IYB7 885 aaKnown RBP18.22■□□□□ 0.51
LRFN1-201ENST00000248668 RNF41Q9H4P4 317 aaPredicted RBP18.22■□□□□ 0.51
LRFN1-201ENST00000248668 ANO10Q9NW15 660 aa18.22■□□□□ 0.51
LRFN1-201ENST00000248668 CNTNAP4Q9C0A0 1308 aa18.22■□□□□ 0.51
LRFN1-201ENST00000248668 C4AP0C0L4 1744 aa18.22■□□□□ 0.51
LRFN1-201ENST00000248668 C4BP0C0L5 1744 aa18.22■□□□□ 0.51
LRFN1-201ENST00000248668 NMT2O60551 498 aa18.22■□□□□ 0.51
LRFN1-201ENST00000248668 HIBADHP31937 336 aaKnown RBP18.22■□□□□ 0.51
LRFN1-201ENST00000248668 TPTE2Q6XPS3 522 aa18.22■□□□□ 0.51
LRFN1-201ENST00000248668 TRIM22Q8IYM9 498 aa18.22■□□□□ 0.51
LRFN1-201ENST00000248668 FMNL1O95466 1100 aaPredicted RBP18.21■□□□□ 0.51
LRFN1-201ENST00000248668 SLC3A2P08195 630 aaKnown RBP18.21■□□□□ 0.51
LRFN1-201ENST00000248668 CYP2D6P10635 497 aa18.21■□□□□ 0.51
LRFN1-201ENST00000248668 ARID5BQ14865 1188 aa18.21■□□□□ 0.51
LRFN1-201ENST00000248668 OXER1Q8TDS5 423 aa18.21■□□□□ 0.51
LRFN1-201ENST00000248668 ESR2Q92731 530 aa18.21■□□□□ 0.51
LRFN1-201ENST00000248668 ARAP2Q8WZ64 1704 aa18.21■□□□□ 0.51
LRFN1-201ENST00000248668 CCDC144BQ3MJ40 725 aa18.21■□□□□ 0.51
LRFN1-201ENST00000248668 FAM47AQ5JRC9 791 aa18.21■□□□□ 0.51
LRFN1-201ENST00000248668 PLA2G4DQ86XP0 818 aa18.21■□□□□ 0.51
LRFN1-201ENST00000248668 DHX40Q8IX18 779 aaKnown RBP18.21■□□□□ 0.51
LRFN1-201ENST00000248668 CEP57L1Q8IYX8 460 aa18.21■□□□□ 0.51
LRFN1-201ENST00000248668 FANCBQ8NB91 859 aa18.21■□□□□ 0.51
LRFN1-201ENST00000248668 KIAA1468Q9P260 1216 aa18.21■□□□□ 0.51
LRFN1-201ENST00000248668 ANKIB1Q9P2G1 1089 aa18.21■□□□□ 0.51
LRFN1-201ENST00000248668 IFNAR1P17181 557 aa18.21■□□□□ 0.5
LRFN1-201ENST00000248668 RFC4P35249 363 aa18.21■□□□□ 0.5
LRFN1-201ENST00000248668 SHC4Q6S5L8 630 aa18.2■□□□□ 0.5
LRFN1-201ENST00000248668 FILIP1Q7Z7B0 1213 aa18.2■□□□□ 0.5
LRFN1-201ENST00000248668 NYXQ9GZU5 481 aa18.2■□□□□ 0.5
LRFN1-201ENST00000248668 SYKP43405 635 aa18.2■□□□□ 0.5
LRFN1-201ENST00000248668 ENAHQ8N8S7 591 aaPredicted RBP18.2■□□□□ 0.5
LRFN1-201ENST00000248668 GRIN1Q05586 938 aa18.19■□□□□ 0.5
LRFN1-201ENST00000248668 NSUN4Q96CB9 384 aaKnown RBP18.19■□□□□ 0.5
LRFN1-201ENST00000248668 BAZ2AQ9UIF9 1905 aaKnown RBP18.19■□□□□ 0.5
LRFN1-201ENST00000248668 SAFBQ15424 915 aaKnown RBP eCLIP18.19■□□□□ 0.5
LRFN1-201ENST00000248668 FAM196AQ6ZSG2 479 aa18.19■□□□□ 0.5
LRFN1-201ENST00000248668 FBXO33Q7Z6M2 555 aa18.19■□□□□ 0.5
LRFN1-201ENST00000248668 CRACR2BQ8N4Y2 399 aaPredicted RBP18.19■□□□□ 0.5
LRFN1-201ENST00000248668 VPS54Q9P1Q0 977 aa18.19■□□□□ 0.5
LRFN1-201ENST00000248668 CICQ96RK0 1608 aaPredicted RBP18.19■□□□□ 0.5
LRFN1-201ENST00000248668 DOCK2Q92608 1830 aa18.19■□□□□ 0.5
LRFN1-201ENST00000248668 FAM205CA6NFA0 338 aa18.19■□□□□ 0.5
LRFN1-201ENST00000248668 PLEKHA8P1O95397 391 aa18.19■□□□□ 0.5
LRFN1-201ENST00000248668 CMA1P23946 247 aa18.19■□□□□ 0.5
LRFN1-201ENST00000248668 PTPAQ15257 358 aa18.19■□□□□ 0.5
LRFN1-201ENST00000248668 CTR9Q6PD62 1173 aa18.19■□□□□ 0.5
LRFN1-201ENST00000248668 NOSTRINQ8IVI9 506 aa18.19■□□□□ 0.5
LRFN1-201ENST00000248668 KIAA1524Q8TCG1 905 aa18.19■□□□□ 0.5
LRFN1-201ENST00000248668 MTMR7Q9Y216 660 aa18.19■□□□□ 0.5
LRFN1-201ENST00000248668 SLC10A5Q5PT55 438 aa18.18■□□□□ 0.5
LRFN1-201ENST00000248668 IFIT1BQ5T764 474 aaKnown RBP18.18■□□□□ 0.5
LRFN1-201ENST00000248668 MEX3CQ5U5Q3 659 aaKnown RBP18.18■□□□□ 0.5
LRFN1-201ENST00000248668 MAP3K14Q99558 947 aa18.18■□□□□ 0.5
LRFN1-201ENST00000248668 PNOCQ13519 176 aa18.18■□□□□ 0.5
LRFN1-201ENST00000248668 NFIXQ14938 502 aa18.18■□□□□ 0.5
LRFN1-201ENST00000248668 CHD4Q14839 1912 aa18.18■□□□□ 0.5
LRFN1-201ENST00000248668 MMP1P03956 469 aa18.17■□□□□ 0.5
LRFN1-201ENST00000248668 U2AF2P26368 475 aaKnown RBP eCLIP18.17■□□□□ 0.5
LRFN1-201ENST00000248668 NBPF11Q86T75 865 aa18.17■□□□□ 0.5
LRFN1-201ENST00000248668 KLHL34Q8N239 644 aa18.17■□□□□ 0.5
LRFN1-201ENST00000248668 ZSCAN10Q96SZ4 725 aaPredicted RBP18.17■□□□□ 0.5
LRFN1-201ENST00000248668 MYH2Q9UKX2 1941 aa18.17■□□□□ 0.5
LRFN1-201ENST00000248668 TOB1P50616 345 aaPredicted RBP18.17■□□□□ 0.5
LRFN1-201ENST00000248668 CBX1P83916 185 aa18.17■□□□□ 0.5
LRFN1-201ENST00000248668 AKAP17AQ02040 695 aaKnown RBP18.17■□□□□ 0.5
LRFN1-201ENST00000248668 SEC23AQ15436 765 aa18.17■□□□□ 0.5
LRFN1-201ENST00000248668 PDILTQ8N807 584 aa18.17■□□□□ 0.5
LRFN1-201ENST00000248668 CACTINQ8WUQ7 758 aaKnown RBP18.17■□□□□ 0.5
LRFN1-201ENST00000248668 CABP5Q9NP86 173 aa18.17■□□□□ 0.5
LRFN1-201ENST00000248668 PCDHB6Q9Y5E3 794 aa18.17■□□□□ 0.5
LRFN1-201ENST00000248668 RREB1Q92766 1687 aa18.17■□□□□ 0.5
LRFN1-201ENST00000248668 COL5A3P25940 1745 aaPredicted RBP18.16■□□□□ 0.5
LRFN1-201ENST00000248668 FOXN1O15353 648 aa18.16■□□□□ 0.5
LRFN1-201ENST00000248668 V9GY48 417 aaPredicted RBP18.16■□□□□ 0.5
LRFN1-201ENST00000248668 DZIP1Q86YF9 867 aaKnown RBP18.16■□□□□ 0.5
LRFN1-201ENST00000248668 IGSF3O75054 1194 aa18.16■□□□□ 0.5
LRFN1-201ENST00000248668 TM4SF1P30408 202 aa18.16■□□□□ 0.5
LRFN1-201ENST00000248668 DIXDC1Q155Q3 683 aa18.16■□□□□ 0.5
LRFN1-201ENST00000248668 TRAPPC3LQ5T215 181 aa18.16■□□□□ 0.5
LRFN1-201ENST00000248668 JMYQ8N9B5 988 aa18.16■□□□□ 0.5
LRFN1-201ENST00000248668 WASF1Q92558 559 aa18.16■□□□□ 0.5
LRFN1-201ENST00000248668 SHISA4Q96DD7 197 aa18.16■□□□□ 0.5
LRFN1-201ENST00000248668 DEXIO95424 95 aa18.15■□□□□ 0.5
LRFN1-201ENST00000248668 IQCA1Q86XH1 822 aa18.15■□□□□ 0.5
LRFN1-201ENST00000248668 NAT10Q9H0A0 1025 aaKnown RBP18.15■□□□□ 0.5
LRFN1-201ENST00000248668 DCP1AQ9NPI6 582 aaPredicted RBP18.15■□□□□ 0.5
LRFN1-201ENST00000248668 CCDC196A0A1B0GTZ2 297 aa18.15■□□□□ 0.5
LRFN1-201ENST00000248668 CAVIN2O95810 425 aa18.15■□□□□ 0.5
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