RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 PDE4BQ07343 736 aa8.39□□□□□ -1.07
RIF1-201ENST00000243326 BSPRYQ5W0U4 402 aa8.39□□□□□ -1.07
RIF1-201ENST00000243326 NCAPH2Q6IBW4 605 aa8.39□□□□□ -1.07
RIF1-201ENST00000243326 FBXO38Q6PIJ6 1188 aa8.39□□□□□ -1.07
RIF1-201ENST00000243326 B4GALNT4Q76KP1 1039 aa8.39□□□□□ -1.07
RIF1-201ENST00000243326 VSIG1Q86XK7 387 aa8.39□□□□□ -1.07
RIF1-201ENST00000243326 ZCCHC17Q9NP64 241 aaKnown RBP8.39□□□□□ -1.07
RIF1-201ENST00000243326 TCP11Q8WWU5 503 aa8.39□□□□□ -1.07
RIF1-201ENST00000243326 JPH2Q9BR39 696 aaPredicted RBP8.39□□□□□ -1.07
RIF1-201ENST00000243326 DDX23Q9BUQ8 820 aaKnown RBP8.39□□□□□ -1.07
RIF1-201ENST00000243326 DNAJC17Q9NVM6 304 aaKnown RBP8.39□□□□□ -1.07
RIF1-201ENST00000243326 SNX1Q13596 522 aa8.39□□□□□ -1.07
RIF1-201ENST00000243326 LBHD1Q9BQE6 289 aaPredicted RBP8.39□□□□□ -1.07
RIF1-201ENST00000243326 PRPF38AQ8NAV1 312 aaKnown RBP8.39□□□□□ -1.07
RIF1-201ENST00000243326 SMC6Q96SB8 1091 aa8.39□□□□□ -1.07
RIF1-201ENST00000243326 CCDC174Q6PII3 467 aa8.39□□□□□ -1.07
RIF1-201ENST00000243326 DIS3L2Q8IYB7 885 aaKnown RBP8.39□□□□□ -1.07
RIF1-201ENST00000243326 SLC35F6Q8N357 371 aa8.39□□□□□ -1.07
RIF1-201ENST00000243326 CDC5LQ99459 802 aaKnown RBP8.39□□□□□ -1.07
RIF1-201ENST00000243326 CAPS2Q9BXY5 557 aa8.39□□□□□ -1.07
RIF1-201ENST00000243326 IFT88Q13099 833 aa8.39□□□□□ -1.07
RIF1-201ENST00000243326 NCBP1Q09161 790 aaKnown RBP8.39□□□□□ -1.07
RIF1-201ENST00000243326 CNGA4Q8IV77 575 aa8.39□□□□□ -1.07
RIF1-201ENST00000243326 ESR2Q92731 530 aa8.39□□□□□ -1.07
RIF1-201ENST00000243326 MTMR6Q9Y217 621 aa8.39□□□□□ -1.07
RIF1-201ENST00000243326 MAP1BP46821 2468 aaKnown RBP8.39□□□□□ -1.07
RIF1-201ENST00000243326 CFAP157Q5JU67 520 aa8.39□□□□□ -1.07
RIF1-201ENST00000243326 TESK2Q96S53 571 aa8.39□□□□□ -1.07
RIF1-201ENST00000243326 IFI16Q16666 785 aaKnown RBP8.38□□□□□ -1.07
RIF1-201ENST00000243326 PPP4R3AQ6IN85 833 aa8.38□□□□□ -1.07
RIF1-201ENST00000243326 TFCP2L1Q9NZI6 479 aa8.38□□□□□ -1.07
RIF1-201ENST00000243326 LOC102724159A0A0B4J2E5 919 aa8.38□□□□□ -1.07
RIF1-201ENST00000243326 PAK1Q13153 545 aa8.38□□□□□ -1.07
RIF1-201ENST00000243326 PWP2Q15269 919 aaKnown RBP8.38□□□□□ -1.07
RIF1-201ENST00000243326 RASEFQ8IZ41 740 aa8.38□□□□□ -1.07
RIF1-201ENST00000243326 RPUSD2Q8IZ73 545 aaKnown RBP8.38□□□□□ -1.07
RIF1-201ENST00000243326 MAGI1Q96QZ7 1491 aaPredicted RBP8.38□□□□□ -1.07
RIF1-201ENST00000243326 KRT23Q9C075 422 aa8.38□□□□□ -1.07
RIF1-201ENST00000243326 NAA16Q6N069 864 aaPredicted RBP8.38□□□□□ -1.07
RIF1-201ENST00000243326 CAVIN2O95810 425 aa8.38□□□□□ -1.07
RIF1-201ENST00000243326 ACTN3Q08043 901 aaPredicted RBP8.38□□□□□ -1.07
RIF1-201ENST00000243326 TRIP13Q15645 432 aaPredicted RBP8.38□□□□□ -1.07
RIF1-201ENST00000243326 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.38□□□□□ -1.07
RIF1-201ENST00000243326 FCHSD1Q86WN1 690 aa8.38□□□□□ -1.07
RIF1-201ENST00000243326 ARHGAP45Q92619 1136 aa8.38□□□□□ -1.07
RIF1-201ENST00000243326 A0A1W2PP64 1363 aa8.38□□□□□ -1.07
RIF1-201ENST00000243326 ANKRD36BQ8N2N9 1353 aa8.38□□□□□ -1.07
RIF1-201ENST00000243326 TBC1D8O95759 1140 aa8.38□□□□□ -1.07
RIF1-201ENST00000243326 RBM28Q9NW13 759 aaKnown RBP8.38□□□□□ -1.07
RIF1-201ENST00000243326 MAGED2Q9UNF1 606 aaPredicted RBP8.38□□□□□ -1.07
RIF1-201ENST00000243326 SMAD1Q15797 465 aaKnown RBP8.38□□□□□ -1.07
RIF1-201ENST00000243326 OPHN1O60890 802 aa8.38□□□□□ -1.07
RIF1-201ENST00000243326 CIB2O75838 187 aa8.38□□□□□ -1.07
RIF1-201ENST00000243326 A1BGP04217 495 aa8.38□□□□□ -1.07
RIF1-201ENST00000243326 HHATQ5VTY9 493 aa8.38□□□□□ -1.07
RIF1-201ENST00000243326 OTUD6AQ7L8S5 288 aa8.38□□□□□ -1.07
RIF1-201ENST00000243326 GSDMBQ8TAX9 411 aa8.38□□□□□ -1.07
RIF1-201ENST00000243326 BCAS4Q8TDM0 211 aa8.38□□□□□ -1.07
RIF1-201ENST00000243326 SLC4A7Q9Y6M7 1214 aa8.38□□□□□ -1.07
RIF1-201ENST00000243326 TTC21BQ7Z4L5 1316 aa8.38□□□□□ -1.07
RIF1-201ENST00000243326 TMEM232C9JQI7 657 aa8.38□□□□□ -1.07
RIF1-201ENST00000243326 SGSM2O43147 1006 aa8.38□□□□□ -1.07
RIF1-201ENST00000243326 DPCR1Q3MIW9 517 aa8.38□□□□□ -1.07
RIF1-201ENST00000243326 RBM26Q5T8P6 1007 aaKnown RBP8.38□□□□□ -1.07
RIF1-201ENST00000243326 BRAPQ7Z569 592 aa8.38□□□□□ -1.07
RIF1-201ENST00000243326 INTS4Q96HW7 963 aaKnown RBP8.38□□□□□ -1.07
RIF1-201ENST00000243326 BIN2Q9UBW5 565 aaPredicted RBP8.38□□□□□ -1.07
RIF1-201ENST00000243326 RFC1P35251 1148 aaPredicted RBP8.38□□□□□ -1.07
RIF1-201ENST00000243326 CACNB1Q02641 598 aaPredicted RBP8.38□□□□□ -1.07
RIF1-201ENST00000243326 GUCY2DQ02846 1103 aa8.38□□□□□ -1.07
RIF1-201ENST00000243326 TRIM7Q9C029 511 aa8.38□□□□□ -1.07
RIF1-201ENST00000243326 G3BP2Q9UN86 482 aaKnown RBP8.38□□□□□ -1.07
RIF1-201ENST00000243326 RNF40O75150 1001 aa8.38□□□□□ -1.07
RIF1-201ENST00000243326 ZAP70P43403 619 aa8.38□□□□□ -1.07
RIF1-201ENST00000243326 GBP1P32455 592 aa8.38□□□□□ -1.07
RIF1-201ENST00000243326 KCNJ18B7U540 433 aa8.37□□□□□ -1.07
RIF1-201ENST00000243326 KCNJ12Q14500 433 aa8.37□□□□□ -1.07
RIF1-201ENST00000243326 TTC38Q5R3I4 469 aa8.37□□□□□ -1.07
RIF1-201ENST00000243326 DNAJC5BQ9UF47 199 aa8.37□□□□□ -1.07
RIF1-201ENST00000243326 KRT28Q7Z3Y7 464 aa8.37□□□□□ -1.07
RIF1-201ENST00000243326 CEP120Q8N960 986 aa8.37□□□□□ -1.07
RIF1-201ENST00000243326 PGBD1Q96JS3 809 aa8.37□□□□□ -1.07
RIF1-201ENST00000243326 VPS37BQ9H9H4 285 aa8.37□□□□□ -1.07
RIF1-201ENST00000243326 NEDD9Q14511 834 aa8.37□□□□□ -1.07
RIF1-201ENST00000243326 POSTNQ15063 836 aa8.37□□□□□ -1.07
RIF1-201ENST00000243326 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.37□□□□□ -1.07
RIF1-201ENST00000243326 FRMPD2Q68DX3 1309 aaPredicted RBP8.37□□□□□ -1.07
RIF1-201ENST00000243326 hCG_2014768A0A024R1R8 64 aa8.37□□□□□ -1.07
RIF1-201ENST00000243326 SLCO1A2P46721 670 aa8.37□□□□□ -1.07
RIF1-201ENST00000243326 TLR7Q9NYK1 1049 aaKnown RBP8.37□□□□□ -1.07
RIF1-201ENST00000243326 CCDC169A6NNP5 214 aa8.37□□□□□ -1.07
RIF1-201ENST00000243326 GJB4Q9NTQ9 266 aa8.37□□□□□ -1.07
RIF1-201ENST00000243326 ATXN8OSP0DMR3 200 aa8.37□□□□□ -1.07
RIF1-201ENST00000243326 CYP2J2P51589 502 aa8.37□□□□□ -1.07
RIF1-201ENST00000243326 KRT12Q99456 494 aa8.37□□□□□ -1.07
RIF1-201ENST00000243326 TCHPQ9BT92 498 aa8.37□□□□□ -1.07
RIF1-201ENST00000243326 FAM167BQ9BTA0 163 aa8.37□□□□□ -1.07
RIF1-201ENST00000243326 A0A1B0GUA9 196 aa8.37□□□□□ -1.07
RIF1-201ENST00000243326 N4BP2L2Q92802 583 aaPredicted RBP8.37□□□□□ -1.07
RIF1-201ENST00000243326 EYA1Q99502 592 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms