RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 EFCAB8A8MWE9 144 aa12.42□□□□□ -0.42
COPA-201ENST00000241704 B4E1Z4 1266 aa12.42□□□□□ -0.42
COPA-201ENST00000241704 H7C1D1 291 aa12.42□□□□□ -0.42
COPA-201ENST00000241704 BIN1O00499 593 aa12.42□□□□□ -0.42
COPA-201ENST00000241704 EBAG9O00559 213 aa12.42□□□□□ -0.42
COPA-201ENST00000241704 BRAPQ7Z569 592 aa12.42□□□□□ -0.42
COPA-201ENST00000241704 IQGAP1P46940 1657 aa12.42□□□□□ -0.42
COPA-201ENST00000241704 KIF5CO60282 957 aa12.42□□□□□ -0.42
COPA-201ENST00000241704 CIAO1O76071 339 aa12.42□□□□□ -0.42
COPA-201ENST00000241704 C2CD5Q86YS7 1000 aa12.42□□□□□ -0.42
COPA-201ENST00000241704 PIGBQ92521 554 aa12.42□□□□□ -0.42
COPA-201ENST00000241704 PICK1Q9NRD5 415 aa12.42□□□□□ -0.42
COPA-201ENST00000241704 SEPT11Q9NVA2 429 aaKnown RBP12.42□□□□□ -0.42
COPA-201ENST00000241704 PTPRUQ92729 1446 aa12.42□□□□□ -0.42
COPA-201ENST00000241704 PREX1Q8TCU6 1659 aa12.41□□□□□ -0.42
COPA-201ENST00000241704 TECPR2O15040 1411 aa12.41□□□□□ -0.42
COPA-201ENST00000241704 SPTLC2O15270 562 aa12.41□□□□□ -0.42
COPA-201ENST00000241704 IDEP14735 1019 aa12.41□□□□□ -0.42
COPA-201ENST00000241704 MCM3P25205 808 aa12.41□□□□□ -0.42
COPA-201ENST00000241704 KIF4BQ2VIQ3 1234 aa12.41□□□□□ -0.42
COPA-201ENST00000241704 ATL3Q6DD88 541 aa12.41□□□□□ -0.42
COPA-201ENST00000241704 CNKSR1Q969H4 720 aa12.41□□□□□ -0.42
COPA-201ENST00000241704 ANGEL1Q9UNK9 670 aaKnown RBP12.41□□□□□ -0.42
COPA-201ENST00000241704 ZNF532Q9HCE3 1301 aa12.41□□□□□ -0.42
COPA-201ENST00000241704 PPP2R3AQ06190 1150 aa12.41□□□□□ -0.42
COPA-201ENST00000241704 EAPPQ56P03 285 aaPredicted RBP12.41□□□□□ -0.42
COPA-201ENST00000241704 DNAI2Q9GZS0 605 aa12.41□□□□□ -0.42
COPA-201ENST00000241704 OVOS2A0A0J9YW53 1432 aa12.41□□□□□ -0.42
COPA-201ENST00000241704 OVOS2Q6IE36 1432 aa12.41□□□□□ -0.42
COPA-201ENST00000241704 C1orf167Q5SNV9 1468 aa12.41□□□□□ -0.42
COPA-201ENST00000241704 A0A0D9SFI3 127 aa12.41□□□□□ -0.42
COPA-201ENST00000241704 SH2D4AQ9H788 454 aa12.41□□□□□ -0.42
COPA-201ENST00000241704 POLA2Q14181 598 aa12.41□□□□□ -0.42
COPA-201ENST00000241704 USPL1Q5W0Q7 1092 aa12.41□□□□□ -0.42
COPA-201ENST00000241704 SMARCC2Q8TAQ2 1214 aa12.41□□□□□ -0.42
COPA-201ENST00000241704 CALML4Q96GE6 196 aa12.41□□□□□ -0.42
COPA-201ENST00000241704 THRAP3Q9Y2W1 955 aaKnown RBP12.41□□□□□ -0.42
COPA-201ENST00000241704 DESP17661 470 aa12.4□□□□□ -0.42
COPA-201ENST00000241704 CALML3P27482 149 aa12.4□□□□□ -0.42
COPA-201ENST00000241704 EIF5P55010 431 aaKnown RBP12.4□□□□□ -0.42
COPA-201ENST00000241704 TUBB4BP68371 445 aa12.4□□□□□ -0.42
COPA-201ENST00000241704 PRKG1Q13976 671 aa12.4□□□□□ -0.42
COPA-201ENST00000241704 CAGE1Q8TC20 777 aa12.4□□□□□ -0.42
COPA-201ENST00000241704 ATG3Q9NT62 314 aa12.4□□□□□ -0.42
COPA-201ENST00000241704 DBNLQ9UJU6 430 aaKnown RBP12.4□□□□□ -0.42
COPA-201ENST00000241704 ERLIN2O94905 339 aa12.4□□□□□ -0.42
COPA-201ENST00000241704 RXRAP19793 462 aa12.4□□□□□ -0.42
COPA-201ENST00000241704 AMPD3Q01432 767 aa12.4□□□□□ -0.42
COPA-201ENST00000241704 MICALCLQ6ZW33 695 aa12.4□□□□□ -0.42
COPA-201ENST00000241704 HOOK2Q96ED9 719 aa12.4□□□□□ -0.42
COPA-201ENST00000241704 SPATA31D1Q6ZQQ2 1576 aa12.4□□□□□ -0.42
COPA-201ENST00000241704 DEPDC5O75140 1603 aa12.4□□□□□ -0.42
COPA-201ENST00000241704 TRIM75PA6NK02 468 aa12.4□□□□□ -0.42
COPA-201ENST00000241704 TRIM66O15016 1216 aa12.4□□□□□ -0.42
COPA-201ENST00000241704 PTH1RQ03431 593 aa12.4□□□□□ -0.42
COPA-201ENST00000241704 HEATR3Q7Z4Q2 680 aa12.4□□□□□ -0.42
COPA-201ENST00000241704 SRLQ86TD4 932 aa12.4□□□□□ -0.42
COPA-201ENST00000241704 GREM2Q9H772 168 aa12.4□□□□□ -0.42
COPA-201ENST00000241704 RBM28Q9NW13 759 aaKnown RBP12.4□□□□□ -0.42
COPA-201ENST00000241704 AFF2P51816 1311 aa12.4□□□□□ -0.42
COPA-201ENST00000241704 FRMPD1Q5SYB0 1578 aa12.4□□□□□ -0.42
COPA-201ENST00000241704 TULP2O00295 520 aa12.39□□□□□ -0.43
COPA-201ENST00000241704 PHACTR2O75167 634 aa12.39□□□□□ -0.43
COPA-201ENST00000241704 SEC31AO94979 1220 aaKnown RBP12.39□□□□□ -0.43
COPA-201ENST00000241704 DLGAP5Q15398 846 aa12.39□□□□□ -0.43
COPA-201ENST00000241704 E2F4Q16254 413 aa12.39□□□□□ -0.43
COPA-201ENST00000241704 MCTP2Q6DN12 878 aa12.39□□□□□ -0.43
COPA-201ENST00000241704 PALD1Q9ULE6 856 aa12.39□□□□□ -0.43
COPA-201ENST00000241704 PDE8BO95263 885 aa12.39□□□□□ -0.43
COPA-201ENST00000241704 CCDC172P0C7W6 258 aa12.39□□□□□ -0.43
COPA-201ENST00000241704 MARCKSP29966 332 aaPredicted RBP12.39□□□□□ -0.43
COPA-201ENST00000241704 ETF1P62495 437 aaKnown RBP12.39□□□□□ -0.43
COPA-201ENST00000241704 CEP112Q8N8E3 955 aa12.39□□□□□ -0.43
COPA-201ENST00000241704 CERKQ8TCT0 537 aa12.39□□□□□ -0.43
COPA-201ENST00000241704 ZKSCAN3Q9BRR0 538 aa12.39□□□□□ -0.43
COPA-201ENST00000241704 ERVV-1B6SEH8 477 aa12.39□□□□□ -0.43
COPA-201ENST00000241704 GUCY2CP25092 1073 aa12.39□□□□□ -0.43
COPA-201ENST00000241704 CEP83Q9Y592 693 aa12.39□□□□□ -0.43
COPA-201ENST00000241704 MYO3AQ8NEV4 1616 aa12.39□□□□□ -0.43
COPA-201ENST00000241704 PSDA5PKW4 1024 aaPredicted RBP12.39□□□□□ -0.43
COPA-201ENST00000241704 EFCAB13Q8IY85 973 aa12.39□□□□□ -0.43
COPA-201ENST00000241704 PUS3Q9BZE2 481 aaKnown RBP12.39□□□□□ -0.43
COPA-201ENST00000241704 IFNKQ9P0W0 207 aa12.39□□□□□ -0.43
COPA-201ENST00000241704 NAPAP54920 295 aa12.38□□□□□ -0.43
COPA-201ENST00000241704 TBC1D22AQ8WUA7 517 aa12.38□□□□□ -0.43
COPA-201ENST00000241704 CPS1P31327 1500 aa12.38□□□□□ -0.43
COPA-201ENST00000241704 E7EWF7 191 aa12.38□□□□□ -0.43
COPA-201ENST00000241704 TSG101Q99816 390 aa12.38□□□□□ -0.43
COPA-201ENST00000241704 PTPN12Q05209 780 aaKnown RBP12.38□□□□□ -0.43
COPA-201ENST00000241704 BRD3Q15059 726 aa12.38□□□□□ -0.43
COPA-201ENST00000241704 SAP30BPQ9UHR5 308 aaKnown RBP12.38□□□□□ -0.43
COPA-201ENST00000241704 SPDYE3A6NKU9 549 aa12.38□□□□□ -0.43
COPA-201ENST00000241704 TUBBP07437 444 aa12.38□□□□□ -0.43
COPA-201ENST00000241704 POTEDQ86YR6 584 aa12.38□□□□□ -0.43
COPA-201ENST00000241704 FGFR1OPO95684 399 aaKnown RBP12.37□□□□□ -0.43
COPA-201ENST00000241704 KCNQ4P56696 695 aa12.37□□□□□ -0.43
COPA-201ENST00000241704 LRCH2Q5VUJ6 765 aa12.37□□□□□ -0.43
COPA-201ENST00000241704 MMS22LQ6ZRQ5 1243 aa12.37□□□□□ -0.43
COPA-201ENST00000241704 NLRP10Q86W26 655 aa12.37□□□□□ -0.43
COPA-201ENST00000241704 ERMNQ8TAM6 284 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms