RNA–Protein interactions for RNA: ENST00000239450.4

PCDHB12-201, Transcript of protocadherin beta 12, humanhuman

APPRIS P1 BASIC

Gene PCDHB12, Length 3,853 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB12-201ENST00000239450 LIG1P18858 919 aa13.52□□□□□ -0.25
PCDHB12-201ENST00000239450 CDC27P30260 824 aa13.52□□□□□ -0.25
PCDHB12-201ENST00000239450 USP17L1Q7RTZ2 530 aa13.52□□□□□ -0.25
PCDHB12-201ENST00000239450 CPVLQ9H3G5 476 aa13.52□□□□□ -0.25
PCDHB12-201ENST00000239450 USP40Q9NVE5 1235 aa13.52□□□□□ -0.25
PCDHB12-201ENST00000239450 SCAF8Q9UPN6 1271 aaKnown RBP13.52□□□□□ -0.25
PCDHB12-201ENST00000239450 A0A1B0GVL5 298 aa13.52□□□□□ -0.25
PCDHB12-201ENST00000239450 SH2B2O14492 632 aaPredicted RBP13.52□□□□□ -0.25
PCDHB12-201ENST00000239450 NLRP5P59047 1200 aa13.52□□□□□ -0.25
PCDHB12-201ENST00000239450 CCDC96Q2M329 555 aa13.52□□□□□ -0.25
PCDHB12-201ENST00000239450 NKX2-3Q8TAU0 364 aa13.52□□□□□ -0.25
PCDHB12-201ENST00000239450 DCP1AQ9NPI6 582 aaPredicted RBP13.52□□□□□ -0.25
PCDHB12-201ENST00000239450 MYH14Q7Z406 1995 aaKnown RBP13.52□□□□□ -0.25
PCDHB12-201ENST00000239450 TCRBV5S4A2TA0A5A2 114 aa13.51□□□□□ -0.25
PCDHB12-201ENST00000239450 ESPNB1AK53 854 aa13.51□□□□□ -0.25
PCDHB12-201ENST00000239450 KRT40Q6A162 431 aa13.51□□□□□ -0.25
PCDHB12-201ENST00000239450 SLF2Q8IX21 1173 aa13.51□□□□□ -0.25
PCDHB12-201ENST00000239450 LARGE2Q8N3Y3 721 aa13.51□□□□□ -0.25
PCDHB12-201ENST00000239450 JMYQ8N9B5 988 aa13.51□□□□□ -0.25
PCDHB12-201ENST00000239450 LLPHQ9BRT6 129 aaKnown RBP13.51□□□□□ -0.25
PCDHB12-201ENST00000239450 NPR1P16066 1061 aa13.51□□□□□ -0.25
PCDHB12-201ENST00000239450 AOC3Q16853 763 aa13.51□□□□□ -0.25
PCDHB12-201ENST00000239450 TSGA10IPQ3SY00 556 aa13.51□□□□□ -0.25
PCDHB12-201ENST00000239450 FLAD1Q8NFF5 587 aa13.51□□□□□ -0.25
PCDHB12-201ENST00000239450 WASF1Q92558 559 aa13.51□□□□□ -0.25
PCDHB12-201ENST00000239450 UIMC1Q96RL1 719 aa13.51□□□□□ -0.25
PCDHB12-201ENST00000239450 ZSCAN10Q96SZ4 725 aaPredicted RBP13.51□□□□□ -0.25
PCDHB12-201ENST00000239450 PSDA5PKW4 1024 aaPredicted RBP13.5□□□□□ -0.25
PCDHB12-201ENST00000239450 CTR9Q6PD62 1173 aa13.5□□□□□ -0.25
PCDHB12-201ENST00000239450 EYA3Q99504 573 aa13.5□□□□□ -0.25
PCDHB12-201ENST00000239450 BRIP1Q9BX63 1249 aa13.5□□□□□ -0.25
PCDHB12-201ENST00000239450 RFX7Q2KHR2 1363 aa13.5□□□□□ -0.25
PCDHB12-201ENST00000239450 FOXP2O15409 715 aa13.5□□□□□ -0.25
PCDHB12-201ENST00000239450 HEATR3Q7Z4Q2 680 aa13.5□□□□□ -0.25
PCDHB12-201ENST00000239450 KCNQ5Q9NR82 932 aa13.5□□□□□ -0.25
PCDHB12-201ENST00000239450 CTDNEP1O95476 244 aa13.5□□□□□ -0.25
PCDHB12-201ENST00000239450 TM4SF1P30408 202 aa13.5□□□□□ -0.25
PCDHB12-201ENST00000239450 ZNF512BQ96KM6 892 aaPredicted RBP13.5□□□□□ -0.25
PCDHB12-201ENST00000239450 FANCBQ8NB91 859 aa13.49□□□□□ -0.25
PCDHB12-201ENST00000239450 MASTLQ96GX5 879 aa13.49□□□□□ -0.25
PCDHB12-201ENST00000239450 GOLGA6L6A8MZA4 724 aa13.49□□□□□ -0.25
PCDHB12-201ENST00000239450 BTBD18B2RXH4 712 aa13.49□□□□□ -0.25
PCDHB12-201ENST00000239450 CLEC10AQ8IUN9 316 aa13.49□□□□□ -0.25
PCDHB12-201ENST00000239450 KCNB2Q92953 911 aa13.49□□□□□ -0.25
PCDHB12-201ENST00000239450 CABP5Q9NP86 173 aa13.49□□□□□ -0.25
PCDHB12-201ENST00000239450 DDX19AQ9NUU7 478 aaKnown RBP13.49□□□□□ -0.25
PCDHB12-201ENST00000239450 CLRN2A0PK11 232 aa13.49□□□□□ -0.25
PCDHB12-201ENST00000239450 DIS3L2Q8IYB7 885 aaKnown RBP13.49□□□□□ -0.25
PCDHB12-201ENST00000239450 BCS1LQ9Y276 419 aa13.49□□□□□ -0.25
PCDHB12-201ENST00000239450 SEMA3EO15041 775 aa13.48□□□□□ -0.25
PCDHB12-201ENST00000239450 CLSTN1O94985 981 aa13.48□□□□□ -0.25
PCDHB12-201ENST00000239450 SLURP2P0DP57 97 aa13.48□□□□□ -0.25
PCDHB12-201ENST00000239450 ZNF445P59923 1031 aa13.48□□□□□ -0.25
PCDHB12-201ENST00000239450 SLC15A2Q16348 729 aa13.48□□□□□ -0.25
PCDHB12-201ENST00000239450 TMTC2Q8N394 836 aa13.48□□□□□ -0.25
PCDHB12-201ENST00000239450 CCDC34Q96HJ3 373 aa13.48□□□□□ -0.25
PCDHB12-201ENST00000239450 NBPF3Q9H094 633 aa13.48□□□□□ -0.25
PCDHB12-201ENST00000239450 LY9Q9HBG7 655 aa13.48□□□□□ -0.25
PCDHB12-201ENST00000239450 GPCPD1Q9NPB8 672 aa13.48□□□□□ -0.25
PCDHB12-201ENST00000239450 PLEKHA8P1O95397 391 aa13.48□□□□□ -0.25
PCDHB12-201ENST00000239450 TPM4P67936 248 aa13.48□□□□□ -0.25
PCDHB12-201ENST00000239450 SRCAPQ6ZRS2 3230 aa13.48□□□□□ -0.25
PCDHB12-201ENST00000239450 LRRC47Q8N1G4 583 aaKnown RBP13.48□□□□□ -0.25
PCDHB12-201ENST00000239450 CLIC4Q9Y696 253 aa13.48□□□□□ -0.25
PCDHB12-201ENST00000239450 LAMB4A4D0S4 1761 aa13.48□□□□□ -0.25
PCDHB12-201ENST00000239450 FSD2A1L4K1 749 aa13.48□□□□□ -0.25
PCDHB12-201ENST00000239450 SPTLC2O15270 562 aa13.48□□□□□ -0.25
PCDHB12-201ENST00000239450 GUCY1A2P33402 732 aa13.48□□□□□ -0.25
PCDHB12-201ENST00000239450 GPKOWQ92917 476 aaPredicted RBP eCLIP13.48□□□□□ -0.25
PCDHB12-201ENST00000239450 DNAJC25Q9H1X3 360 aa13.48□□□□□ -0.25
PCDHB12-201ENST00000239450 ZMYM6O95789 1325 aa13.48□□□□□ -0.25
PCDHB12-201ENST00000239450 ADAMTS7Q9UKP4 1686 aa13.47□□□□□ -0.25
PCDHB12-201ENST00000239450 ZNF165P49910 485 aa13.47□□□□□ -0.25
PCDHB12-201ENST00000239450 NR5A1Q13285 461 aa13.47□□□□□ -0.25
PCDHB12-201ENST00000239450 ANO6Q4KMQ2 910 aa13.47□□□□□ -0.25
PCDHB12-201ENST00000239450 ZNF287Q9HBT7 754 aa13.47□□□□□ -0.25
PCDHB12-201ENST00000239450 TMOD2Q9NZR1 351 aa13.47□□□□□ -0.25
PCDHB12-201ENST00000239450 ONECUT3O60422 494 aaPredicted RBP13.47□□□□□ -0.25
PCDHB12-201ENST00000239450 NR1I2O75469 434 aa13.47□□□□□ -0.25
PCDHB12-201ENST00000239450 PLCD1P51178 756 aa13.47□□□□□ -0.25
PCDHB12-201ENST00000239450 ZNF830Q96NB3 372 aaPredicted RBP13.47□□□□□ -0.25
PCDHB12-201ENST00000239450 ZNF277Q9NRM2 450 aaPredicted RBP13.47□□□□□ -0.25
PCDHB12-201ENST00000239450 GJA3Q9Y6H8 435 aa13.47□□□□□ -0.25
PCDHB12-201ENST00000239450 GLI3P10071 1580 aa13.47□□□□□ -0.25
PCDHB12-201ENST00000239450 HLA-DOAP06340 250 aa13.47□□□□□ -0.25
PCDHB12-201ENST00000239450 ZYXQ15942 572 aaKnown RBP13.47□□□□□ -0.25
PCDHB12-201ENST00000239450 ENAHQ8N8S7 591 aaPredicted RBP13.47□□□□□ -0.25
PCDHB12-201ENST00000239450 FBXO18Q8NFZ0 1043 aa13.47□□□□□ -0.25
PCDHB12-201ENST00000239450 RIOK1Q9BRS2 568 aaKnown RBP13.47□□□□□ -0.25
PCDHB12-201ENST00000239450 ATP8A2Q9NTI2 1148 aa13.47□□□□□ -0.25
PCDHB12-201ENST00000239450 ARPP21Q9UBL0 812 aaPredicted RBP13.47□□□□□ -0.25
PCDHB12-201ENST00000239450 CTDP1Q9Y5B0 961 aaPredicted RBP13.47□□□□□ -0.25
PCDHB12-201ENST00000239450 FRMPD2Q68DX3 1309 aaPredicted RBP13.47□□□□□ -0.25
PCDHB12-201ENST00000239450 ADCY5O95622 1261 aa13.46□□□□□ -0.25
PCDHB12-201ENST00000239450 SRGNP10124 158 aa13.46□□□□□ -0.25
PCDHB12-201ENST00000239450 HMGB2P26583 209 aaKnown RBP13.46□□□□□ -0.25
PCDHB12-201ENST00000239450 HSP90AA4PQ58FG1 418 aa13.46□□□□□ -0.25
PCDHB12-201ENST00000239450 TEKT1Q969V4 418 aa13.46□□□□□ -0.25
PCDHB12-201ENST00000239450 UBA5Q9GZZ9 404 aa13.46□□□□□ -0.25
PCDHB12-201ENST00000239450 NUP98P52948 1817 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms