RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 BCL2L12Q9HB09 334 aa14.95□□□□□ -0.02
NEK4-201ENST00000233027 CEP83Q9Y592 693 aa14.95□□□□□ -0.02
NEK4-201ENST00000233027 PKP1Q13835 747 aa14.95□□□□□ -0.02
NEK4-201ENST00000233027 PUM3Q15397 648 aaKnown RBP14.95□□□□□ -0.02
NEK4-201ENST00000233027 FCHSD1Q86WN1 690 aa14.95□□□□□ -0.02
NEK4-201ENST00000233027 MLKLQ8NB16 471 aa14.95□□□□□ -0.02
NEK4-201ENST00000233027 RSRC1Q96IZ7 334 aaKnown RBP14.95□□□□□ -0.02
NEK4-201ENST00000233027 RAD51AP2Q09MP3 1159 aa14.94□□□□□ -0.02
NEK4-201ENST00000233027 MAP7D1Q3KQU3 841 aa14.94□□□□□ -0.02
NEK4-201ENST00000233027 TEX11Q8IYF3 940 aa14.94□□□□□ -0.02
NEK4-201ENST00000233027 RAB3IL1Q8TBN0 382 aa14.94□□□□□ -0.02
NEK4-201ENST00000233027 IP6K1Q92551 441 aa14.94□□□□□ -0.02
NEK4-201ENST00000233027 EDC3Q96F86 508 aaKnown RBP14.94□□□□□ -0.02
NEK4-201ENST00000233027 ZC3H12CQ9C0D7 883 aaKnown RBP14.94□□□□□ -0.02
NEK4-201ENST00000233027 ANKRD2Q9GZV1 360 aa14.94□□□□□ -0.02
NEK4-201ENST00000233027 AATFQ9NY61 560 aaKnown RBP eCLIP14.94□□□□□ -0.02
NEK4-201ENST00000233027 BIRC3Q13489 604 aa14.94□□□□□ -0.02
NEK4-201ENST00000233027 CFAP157Q5JU67 520 aa14.94□□□□□ -0.02
NEK4-201ENST00000233027 LRRC45Q96CN5 670 aa14.94□□□□□ -0.02
NEK4-201ENST00000233027 CHAMP1Q96JM3 812 aa14.94□□□□□ -0.02
NEK4-201ENST00000233027 NDC80O14777 642 aa14.94□□□□□ -0.02
NEK4-201ENST00000233027 IRX5P78411 483 aaPredicted RBP14.94□□□□□ -0.02
NEK4-201ENST00000233027 FAM169AQ9Y6X4 670 aa14.94□□□□□ -0.02
NEK4-201ENST00000233027 BACH1O14867 736 aa14.94□□□□□ -0.02
NEK4-201ENST00000233027 IRX3P78415 501 aaPredicted RBP14.94□□□□□ -0.02
NEK4-201ENST00000233027 B4GALNT4Q76KP1 1039 aa14.94□□□□□ -0.02
NEK4-201ENST00000233027 IFT20Q8IY31 132 aa14.94□□□□□ -0.02
NEK4-201ENST00000233027 DDX23Q9BUQ8 820 aaKnown RBP14.94□□□□□ -0.02
NEK4-201ENST00000233027 GOLGA6BA6NDN3 693 aa14.93□□□□□ -0.02
NEK4-201ENST00000233027 NR1I2O75469 434 aa14.93□□□□□ -0.02
NEK4-201ENST00000233027 NCAPH2Q6IBW4 605 aa14.93□□□□□ -0.02
NEK4-201ENST00000233027 PPP1R21Q6ZMI0 780 aa14.93□□□□□ -0.02
NEK4-201ENST00000233027 ARHGEF12Q9NZN5 1544 aa14.93□□□□□ -0.02
NEK4-201ENST00000233027 PCDH11XQ9BZA7 1347 aa14.93□□□□□ -0.02
NEK4-201ENST00000233027 PCDH11YQ9BZA8 1340 aa14.93□□□□□ -0.02
NEK4-201ENST00000233027 CALUO43852 315 aaPredicted RBP14.93□□□□□ -0.02
NEK4-201ENST00000233027 YTHDC2Q9H6S0 1430 aaKnown RBP14.93□□□□□ -0.02
NEK4-201ENST00000233027 CCDC169A6NNP5 214 aa14.93□□□□□ -0.02
NEK4-201ENST00000233027 E7EWF7 191 aa14.93□□□□□ -0.02
NEK4-201ENST00000233027 CEP104O60308 925 aa14.93□□□□□ -0.02
NEK4-201ENST00000233027 BRD1O95696 1058 aa14.93□□□□□ -0.02
NEK4-201ENST00000233027 INPP5BP32019 993 aa14.93□□□□□ -0.02
NEK4-201ENST00000233027 SERTAD1Q9UHV2 236 aa14.93□□□□□ -0.02
NEK4-201ENST00000233027 ARHGAP6O43182 974 aa14.93□□□□□ -0.02
NEK4-201ENST00000233027 ZAP70P43403 619 aa14.93□□□□□ -0.02
NEK4-201ENST00000233027 NELFCDQ8IXH7 590 aa14.93□□□□□ -0.02
NEK4-201ENST00000233027 ERCC5P28715 1186 aaPredicted RBP14.92□□□□□ -0.02
NEK4-201ENST00000233027 VWA3BQ502W6 1294 aa14.92□□□□□ -0.02
NEK4-201ENST00000233027 CMTR1Q8N1G2 835 aaKnown RBP14.92□□□□□ -0.02
NEK4-201ENST00000233027 KBTBD3Q8NAB2 608 aa14.92□□□□□ -0.02
NEK4-201ENST00000233027 ATP11AP98196 1134 aa14.92□□□□□ -0.02
NEK4-201ENST00000233027 CEP85LQ5SZL2 805 aa14.92□□□□□ -0.02
NEK4-201ENST00000233027 PLCD3Q8N3E9 789 aa14.92□□□□□ -0.02
NEK4-201ENST00000233027 STIM2Q9P246 746 aa14.92□□□□□ -0.02
NEK4-201ENST00000233027 ANAPC4Q9UJX5 808 aa14.92□□□□□ -0.02
NEK4-201ENST00000233027 RTCBQ9Y3I0 505 aaKnown RBP14.92□□□□□ -0.02
NEK4-201ENST00000233027 TRPM2O94759 1503 aa14.92□□□□□ -0.02
NEK4-201ENST00000233027 BLMP54132 1417 aaPredicted RBP14.92□□□□□ -0.02
NEK4-201ENST00000233027 DDX39AO00148 427 aaKnown RBP14.92□□□□□ -0.02
NEK4-201ENST00000233027 CHL1O00533 1208 aa14.92□□□□□ -0.02
NEK4-201ENST00000233027 VPS54Q9P1Q0 977 aa14.92□□□□□ -0.02
NEK4-201ENST00000233027 PTH1RQ03431 593 aa14.92□□□□□ -0.02
NEK4-201ENST00000233027 TUBB2AQ13885 445 aa14.92□□□□□ -0.02
NEK4-201ENST00000233027 WDR44Q5JSH3 913 aa14.92□□□□□ -0.02
NEK4-201ENST00000233027 TMTC1Q8IUR5 882 aa14.92□□□□□ -0.02
NEK4-201ENST00000233027 GPT2Q8TD30 523 aa14.92□□□□□ -0.02
NEK4-201ENST00000233027 FNBP1Q96RU3 617 aa14.92□□□□□ -0.02
NEK4-201ENST00000233027 TUBB2BQ9BVA1 445 aa14.92□□□□□ -0.02
NEK4-201ENST00000233027 PZPP20742 1482 aa14.92□□□□□ -0.02
NEK4-201ENST00000233027 TYW1BQ6NUM6 668 aa14.92□□□□□ -0.02
NEK4-201ENST00000233027 KIFAP3Q92845 792 aa14.92□□□□□ -0.02
NEK4-201ENST00000233027 STMN2Q93045 179 aa14.92□□□□□ -0.02
NEK4-201ENST00000233027 NAP1L3Q99457 506 aaPredicted RBP14.92□□□□□ -0.02
NEK4-201ENST00000233027 ATP5DP30049 168 aa14.91□□□□□ -0.02
NEK4-201ENST00000233027 PPP1R2P41236 205 aa14.91□□□□□ -0.02
NEK4-201ENST00000233027 LRMPQ12912 555 aa14.91□□□□□ -0.02
NEK4-201ENST00000233027 PALD1Q9ULE6 856 aa14.91□□□□□ -0.02
NEK4-201ENST00000233027 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.91□□□□□ -0.02
NEK4-201ENST00000233027 ZNF532Q9HCE3 1301 aa14.91□□□□□ -0.02
NEK4-201ENST00000233027 SND1Q7KZF4 910 aaKnown RBP eCLIP14.91□□□□□ -0.02
NEK4-201ENST00000233027 C8orf37Q96NL8 207 aa14.91□□□□□ -0.02
NEK4-201ENST00000233027 NUP58Q9BVL2 599 aa14.91□□□□□ -0.02
NEK4-201ENST00000233027 GPR161Q8N6U8 529 aaKnown RBP14.91□□□□□ -0.02
NEK4-201ENST00000233027 SNX29Q8TEQ0 813 aa14.91□□□□□ -0.02
NEK4-201ENST00000233027 DESI2Q9BSY9 194 aa14.91□□□□□ -0.02
NEK4-201ENST00000233027 TFCP2L1Q9NZI6 479 aa14.91□□□□□ -0.02
NEK4-201ENST00000233027 INF2Q27J81 1249 aa14.91□□□□□ -0.02
NEK4-201ENST00000233027 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.91□□□□□ -0.02
NEK4-201ENST00000233027 BICRAQ9NZM4 1560 aa14.91□□□□□ -0.02
NEK4-201ENST00000233027 ASXL2Q76L83 1435 aa14.91□□□□□ -0.02
NEK4-201ENST00000233027 RASA3Q14644 834 aa14.91□□□□□ -0.02
NEK4-201ENST00000233027 SLC9C1Q4G0N8 1177 aa14.91□□□□□ -0.02
NEK4-201ENST00000233027 MSANTD4Q8NCY6 345 aa14.91□□□□□ -0.02
NEK4-201ENST00000233027 SWAP70Q9UH65 585 aa14.91□□□□□ -0.02
NEK4-201ENST00000233027 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.91□□□□□ -0.02
NEK4-201ENST00000233027 BUB1BO60566 1050 aaPredicted RBP14.9□□□□□ -0.02
NEK4-201ENST00000233027 CIB2O75838 187 aa14.9□□□□□ -0.02
NEK4-201ENST00000233027 A1BGP04217 495 aa14.9□□□□□ -0.02
NEK4-201ENST00000233027 HIBADHP31937 336 aaKnown RBP14.9□□□□□ -0.02
NEK4-201ENST00000233027 MRPL12P52815 198 aaKnown RBP14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms