RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 PIH1D3Q9NQM4 214 aaKnown RBP10.8□□□□□ -0.68
HLA-DOA-201ENST00000229829 SPATA31A5Q5VU36 1347 aa10.8□□□□□ -0.68
HLA-DOA-201ENST00000229829 SPATA31A7Q8IWB4 1347 aa10.8□□□□□ -0.68
HLA-DOA-201ENST00000229829 ERVV-2B6SEH9 535 aa10.79□□□□□ -0.68
HLA-DOA-201ENST00000229829 SFPQP23246 707 aaKnown RBP eCLIP10.79□□□□□ -0.68
HLA-DOA-201ENST00000229829 SYKP43405 635 aa10.79□□□□□ -0.68
HLA-DOA-201ENST00000229829 MCM6Q14566 821 aa10.79□□□□□ -0.68
HLA-DOA-201ENST00000229829 HLFQ16534 295 aa10.79□□□□□ -0.68
HLA-DOA-201ENST00000229829 LDHAL6AQ6ZMR3 332 aa10.79□□□□□ -0.68
HLA-DOA-201ENST00000229829 BPIFA3Q9BQP9 254 aa10.79□□□□□ -0.68
HLA-DOA-201ENST00000229829 PRDM11Q9NQV5 511 aa10.79□□□□□ -0.68
HLA-DOA-201ENST00000229829 FOXN1O15353 648 aa10.79□□□□□ -0.68
HLA-DOA-201ENST00000229829 METAP2P50579 478 aaKnown RBP eCLIP10.79□□□□□ -0.68
HLA-DOA-201ENST00000229829 TTC31Q49AM3 519 aaPredicted RBP10.79□□□□□ -0.68
HLA-DOA-201ENST00000229829 NOM1Q5C9Z4 860 aaKnown RBP10.79□□□□□ -0.68
HLA-DOA-201ENST00000229829 TICAM2Q86XR7 235 aa10.79□□□□□ -0.68
HLA-DOA-201ENST00000229829 FOXP4Q8IVH2 680 aaPredicted RBP10.79□□□□□ -0.68
HLA-DOA-201ENST00000229829 DNAJC10Q8IXB1 793 aa10.79□□□□□ -0.68
HLA-DOA-201ENST00000229829 BANK1Q8NDB2 785 aa10.79□□□□□ -0.68
HLA-DOA-201ENST00000229829 IMPACTQ9P2X3 320 aa10.79□□□□□ -0.68
HLA-DOA-201ENST00000229829 ANGEL1Q9UNK9 670 aaKnown RBP10.79□□□□□ -0.68
HLA-DOA-201ENST00000229829 RRP15Q9Y3B9 282 aaKnown RBP10.79□□□□□ -0.68
HLA-DOA-201ENST00000229829 RIPOR2Q9Y4F9 1068 aa10.79□□□□□ -0.68
HLA-DOA-201ENST00000229829 SNAP23O00161 211 aa10.79□□□□□ -0.68
HLA-DOA-201ENST00000229829 NRDCO43847 1150 aa10.79□□□□□ -0.68
HLA-DOA-201ENST00000229829 CSF1RP07333 972 aa10.79□□□□□ -0.68
HLA-DOA-201ENST00000229829 ADD2P35612 726 aa10.79□□□□□ -0.68
HLA-DOA-201ENST00000229829 LRRFIP1Q32MZ4 808 aaKnown RBP10.79□□□□□ -0.68
HLA-DOA-201ENST00000229829 ICE2Q659A1 982 aa10.79□□□□□ -0.68
HLA-DOA-201ENST00000229829 STK11IPQ8N1F8 1099 aa10.79□□□□□ -0.68
HLA-DOA-201ENST00000229829 SRRTQ9BXP5 876 aaKnown RBP10.79□□□□□ -0.68
HLA-DOA-201ENST00000229829 ASAP1Q9ULH1 1129 aa10.79□□□□□ -0.68
HLA-DOA-201ENST00000229829 SPEF2Q9C093 1822 aa10.79□□□□□ -0.68
HLA-DOA-201ENST00000229829 TNRC6CQ9HCJ0 1690 aaKnown RBP10.79□□□□□ -0.68
HLA-DOA-201ENST00000229829 RIC1Q4ADV7 1423 aa10.78□□□□□ -0.68
HLA-DOA-201ENST00000229829 TMEM232C9JQI7 657 aa10.78□□□□□ -0.68
HLA-DOA-201ENST00000229829 RANBP6O60518 1105 aaKnown RBP10.78□□□□□ -0.68
HLA-DOA-201ENST00000229829 ITGA6P23229 1130 aa10.78□□□□□ -0.68
HLA-DOA-201ENST00000229829 TRDNQ13061 729 aa10.78□□□□□ -0.68
HLA-DOA-201ENST00000229829 PTPAQ15257 358 aa10.78□□□□□ -0.68
HLA-DOA-201ENST00000229829 APOA5Q6Q788 366 aa10.78□□□□□ -0.68
HLA-DOA-201ENST00000229829 PPP4R3CPQ6ZMV5 832 aa10.78□□□□□ -0.68
HLA-DOA-201ENST00000229829 HELBQ8NG08 1087 aaPredicted RBP10.78□□□□□ -0.68
HLA-DOA-201ENST00000229829 CARD6Q9BX69 1037 aa10.78□□□□□ -0.68
HLA-DOA-201ENST00000229829 STRN4Q9NRL3 753 aa10.78□□□□□ -0.68
HLA-DOA-201ENST00000229829 WWC3Q9ULE0 1092 aa10.78□□□□□ -0.68
HLA-DOA-201ENST00000229829 C10orf71Q711Q0 1435 aa10.78□□□□□ -0.68
HLA-DOA-201ENST00000229829 SH2B2O14492 632 aaPredicted RBP10.78□□□□□ -0.68
HLA-DOA-201ENST00000229829 RGL2O15211 777 aa10.78□□□□□ -0.68
HLA-DOA-201ENST00000229829 PLA2G4AP47712 749 aa10.78□□□□□ -0.68
HLA-DOA-201ENST00000229829 SLC20A2Q08357 652 aa10.78□□□□□ -0.68
HLA-DOA-201ENST00000229829 LONRF3Q496Y0 759 aa10.78□□□□□ -0.68
HLA-DOA-201ENST00000229829 WDR17Q8IZU2 1322 aa10.78□□□□□ -0.68
HLA-DOA-201ENST00000229829 ZNF532Q9HCE3 1301 aa10.78□□□□□ -0.68
HLA-DOA-201ENST00000229829 AKAP11Q9UKA4 1901 aa10.78□□□□□ -0.68
HLA-DOA-201ENST00000229829 KAT6BQ8WYB5 2073 aa10.78□□□□□ -0.68
HLA-DOA-201ENST00000229829 FANCGO15287 622 aa10.78□□□□□ -0.68
HLA-DOA-201ENST00000229829 PCCAP05165 728 aaPredicted RBP10.78□□□□□ -0.68
HLA-DOA-201ENST00000229829 PHKA1P46020 1223 aa10.78□□□□□ -0.68
HLA-DOA-201ENST00000229829 TTLL11Q8NHH1 800 aa10.78□□□□□ -0.68
HLA-DOA-201ENST00000229829 MAP3K14Q99558 947 aa10.78□□□□□ -0.68
HLA-DOA-201ENST00000229829 EFCC1Q9HA90 598 aa10.78□□□□□ -0.68
HLA-DOA-201ENST00000229829 KCND1Q9NSA2 647 aa10.78□□□□□ -0.68
HLA-DOA-201ENST00000229829 FAM217BQ9NTX9 383 aaPredicted RBP10.78□□□□□ -0.68
HLA-DOA-201ENST00000229829 HPSEQ9Y251 543 aa10.78□□□□□ -0.68
HLA-DOA-201ENST00000229829 JRKLQ9Y4A0 524 aa10.78□□□□□ -0.68
HLA-DOA-201ENST00000229829 TACC3Q9Y6A5 838 aa10.78□□□□□ -0.68
HLA-DOA-201ENST00000229829 ZMYM6O95789 1325 aa10.78□□□□□ -0.68
HLA-DOA-201ENST00000229829 NTRK3Q16288 839 aa10.77□□□□□ -0.68
HLA-DOA-201ENST00000229829 METTL16Q86W50 562 aaKnown RBP10.77□□□□□ -0.68
HLA-DOA-201ENST00000229829 CCDC82Q8N4S0 544 aa10.77□□□□□ -0.68
HLA-DOA-201ENST00000229829 CNNM1Q9NRU3 951 aa10.77□□□□□ -0.68
HLA-DOA-201ENST00000229829 VPS18Q9P253 973 aa10.77□□□□□ -0.68
HLA-DOA-201ENST00000229829 TUBE1Q9UJT0 475 aa10.77□□□□□ -0.68
HLA-DOA-201ENST00000229829 BMP6P22004 513 aa10.77□□□□□ -0.69
HLA-DOA-201ENST00000229829 GUCY1A2P33402 732 aa10.77□□□□□ -0.69
HLA-DOA-201ENST00000229829 UBASH3AP57075 661 aa10.77□□□□□ -0.69
HLA-DOA-201ENST00000229829 GRIN1Q05586 938 aa10.77□□□□□ -0.69
HLA-DOA-201ENST00000229829 PDE4BQ07343 736 aa10.77□□□□□ -0.69
HLA-DOA-201ENST00000229829 SMC1AQ14683 1233 aaKnown RBP10.77□□□□□ -0.69
HLA-DOA-201ENST00000229829 CMTR1Q8N1G2 835 aaKnown RBP10.77□□□□□ -0.69
HLA-DOA-201ENST00000229829 ZBTB38Q8NAP3 1195 aaPredicted RBP10.77□□□□□ -0.69
HLA-DOA-201ENST00000229829 CCDC150Q8NCX0 1101 aa10.77□□□□□ -0.69
HLA-DOA-201ENST00000229829 IGDCC4Q8TDY8 1250 aa10.77□□□□□ -0.69
HLA-DOA-201ENST00000229829 MYCBPQ99417 103 aaPredicted RBP10.77□□□□□ -0.69
HLA-DOA-201ENST00000229829 RABEP2Q9H5N1 569 aa10.77□□□□□ -0.69
HLA-DOA-201ENST00000229829 FANCLQ9NW38 375 aa10.77□□□□□ -0.69
HLA-DOA-201ENST00000229829 SERPINC1P01008 464 aa10.77□□□□□ -0.69
HLA-DOA-201ENST00000229829 CTDSPL2Q05D32 466 aa10.77□□□□□ -0.69
HLA-DOA-201ENST00000229829 CFAP100Q494V2 611 aa10.77□□□□□ -0.69
HLA-DOA-201ENST00000229829 NFXL1Q6ZNB6 911 aa10.77□□□□□ -0.69
HLA-DOA-201ENST00000229829 FAM212AQ96EL1 285 aa10.77□□□□□ -0.69
HLA-DOA-201ENST00000229829 MYH7P12883 1935 aa10.76□□□□□ -0.69
HLA-DOA-201ENST00000229829 UTP14AQ9BVJ6 771 aaKnown RBP10.76□□□□□ -0.69
HLA-DOA-201ENST00000229829 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.76□□□□□ -0.69
HLA-DOA-201ENST00000229829 PCDHA5Q9Y5H7 936 aa10.76□□□□□ -0.69
HLA-DOA-201ENST00000229829 FHOD1Q9Y613 1164 aa10.76□□□□□ -0.69
HLA-DOA-201ENST00000229829 UBN2Q6ZU65 1347 aa10.76□□□□□ -0.69
HLA-DOA-201ENST00000229829 IKBKBO14920 756 aa10.76□□□□□ -0.69
HLA-DOA-201ENST00000229829 IL2RBP14784 551 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms