RNA–Protein interactions for RNA: ENST00000228437.9

PRDM4-201, Transcript of PR/SET domain 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PRDM4, Length 4,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-201ENST00000228437 MCM3P25205 808 aa16.43■□□□□ 0.22
PRDM4-201ENST00000228437 PAFAH1B1P43034 410 aa16.43■□□□□ 0.22
PRDM4-201ENST00000228437 ZAP70P43403 619 aa16.43■□□□□ 0.22
PRDM4-201ENST00000228437 MTIF2P46199 727 aaKnown RBP16.43■□□□□ 0.22
PRDM4-201ENST00000228437 NR5A1Q13285 461 aa16.43■□□□□ 0.22
PRDM4-201ENST00000228437 NCAPHQ15003 741 aa16.43■□□□□ 0.22
PRDM4-201ENST00000228437 TTF2Q9UNY4 1162 aaKnown RBP16.43■□□□□ 0.22
PRDM4-201ENST00000228437 MROH7-TTC4A0A0A0MT08 1334 aa16.42■□□□□ 0.22
PRDM4-201ENST00000228437 ECM2O94769 699 aaPredicted RBP16.42■□□□□ 0.22
PRDM4-201ENST00000228437 PUS3Q9BZE2 481 aaKnown RBP16.42■□□□□ 0.22
PRDM4-201ENST00000228437 ADGRB3O60242 1522 aa16.42■□□□□ 0.22
PRDM4-201ENST00000228437 UBE2Q2LH0YL09 131 aa16.42■□□□□ 0.22
PRDM4-201ENST00000228437 WASF1Q92558 559 aa16.42■□□□□ 0.22
PRDM4-201ENST00000228437 FAM212AQ96EL1 285 aa16.42■□□□□ 0.22
PRDM4-201ENST00000228437 SETD1BQ9UPS6 1966 aaKnown RBP16.42■□□□□ 0.22
PRDM4-201ENST00000228437 AKR1B10O60218 316 aa16.42■□□□□ 0.22
PRDM4-201ENST00000228437 MARCH6O60337 910 aa16.42■□□□□ 0.22
PRDM4-201ENST00000228437 RANBP6O60518 1105 aaKnown RBP16.42■□□□□ 0.22
PRDM4-201ENST00000228437 RTN1Q16799 776 aa16.42■□□□□ 0.22
PRDM4-201ENST00000228437 IQCEQ6IPM2 695 aa16.42■□□□□ 0.22
PRDM4-201ENST00000228437 TATP17735 454 aaPredicted RBP16.41■□□□□ 0.22
PRDM4-201ENST00000228437 CTDSPL2Q05D32 466 aa16.41■□□□□ 0.22
PRDM4-201ENST00000228437 RAD9BQ6WBX8 426 aa16.41■□□□□ 0.22
PRDM4-201ENST00000228437 TADA2BQ86TJ2 420 aa16.41■□□□□ 0.22
PRDM4-201ENST00000228437 ANKRD13CQ8N6S4 541 aa16.41■□□□□ 0.22
PRDM4-201ENST00000228437 TC2NQ8N9U0 490 aa16.41■□□□□ 0.22
PRDM4-201ENST00000228437 CTAGE1Q96RT6 745 aa16.41■□□□□ 0.22
PRDM4-201ENST00000228437 DSCC1Q9BVC3 393 aa16.41■□□□□ 0.22
PRDM4-201ENST00000228437 TRIM10Q9UDY6 481 aa16.41■□□□□ 0.22
PRDM4-201ENST00000228437 WWC3Q9ULE0 1092 aa16.41■□□□□ 0.22
PRDM4-201ENST00000228437 IGKV5-2P06315 115 aa16.41■□□□□ 0.22
PRDM4-201ENST00000228437 PTPN12Q05209 780 aaKnown RBP16.41■□□□□ 0.22
PRDM4-201ENST00000228437 SAR1BQ9Y6B6 198 aa16.41■□□□□ 0.22
PRDM4-201ENST00000228437 MYO3AQ8NEV4 1616 aa16.41■□□□□ 0.22
PRDM4-201ENST00000228437 NF2P35240 595 aa16.41■□□□□ 0.22
PRDM4-201ENST00000228437 SLC7A5Q01650 507 aa16.41■□□□□ 0.22
PRDM4-201ENST00000228437 AMOTQ4VCS5 1084 aa16.41■□□□□ 0.22
PRDM4-201ENST00000228437 TAX1BP1Q86VP1 789 aa16.41■□□□□ 0.22
PRDM4-201ENST00000228437 METTL16Q86W50 562 aaKnown RBP16.41■□□□□ 0.22
PRDM4-201ENST00000228437 FCHSD1Q86WN1 690 aa16.41■□□□□ 0.22
PRDM4-201ENST00000228437 ADGRG1Q9Y653 693 aa16.41■□□□□ 0.22
PRDM4-201ENST00000228437 TRIM75PA6NK02 468 aa16.4■□□□□ 0.22
PRDM4-201ENST00000228437 CXCR5P32302 372 aa16.4■□□□□ 0.22
PRDM4-201ENST00000228437 PTPROQ16827 1216 aa16.4■□□□□ 0.22
PRDM4-201ENST00000228437 LDHAL6AQ6ZMR3 332 aa16.4■□□□□ 0.22
PRDM4-201ENST00000228437 CTCFLQ8NI51 663 aaPredicted RBP16.4■□□□□ 0.22
PRDM4-201ENST00000228437 CCDC47Q96A33 483 aaKnown RBP16.4■□□□□ 0.22
PRDM4-201ENST00000228437 METTL22Q9BUU2 404 aaPredicted RBP16.4■□□□□ 0.22
PRDM4-201ENST00000228437 PHF8Q9UPP1 1060 aa16.4■□□□□ 0.22
PRDM4-201ENST00000228437 PPFIA4O75335 1185 aa16.4■□□□□ 0.22
PRDM4-201ENST00000228437 CDC27P30260 824 aa16.4■□□□□ 0.22
PRDM4-201ENST00000228437 ZNF496Q96IT1 587 aaPredicted RBP16.4■□□□□ 0.22
PRDM4-201ENST00000228437 CCDC114Q96M63 670 aa16.4■□□□□ 0.22
PRDM4-201ENST00000228437 CAPS2Q9BXY5 557 aa16.4■□□□□ 0.22
PRDM4-201ENST00000228437 AKAP2Q9Y2D5 859 aa16.4■□□□□ 0.22
PRDM4-201ENST00000228437 CPS1P31327 1500 aa16.4■□□□□ 0.22
PRDM4-201ENST00000228437 SETBP1Q9Y6X0 1596 aa16.4■□□□□ 0.22
PRDM4-201ENST00000228437 KRT86O43790 486 aa16.4■□□□□ 0.22
PRDM4-201ENST00000228437 GGCXP38435 758 aa16.4■□□□□ 0.22
PRDM4-201ENST00000228437 KANK3Q6NY19 840 aa16.4■□□□□ 0.22
PRDM4-201ENST00000228437 ERBB3P21860 1342 aa16.4■□□□□ 0.22
PRDM4-201ENST00000228437 ADORA1P30542 326 aa16.4■□□□□ 0.22
PRDM4-201ENST00000228437 PDE6BP35913 854 aa16.4■□□□□ 0.22
PRDM4-201ENST00000228437 IL15P40933 162 aaPredicted RBP16.4■□□□□ 0.22
PRDM4-201ENST00000228437 ARID5AQ03989 594 aa16.4■□□□□ 0.22
PRDM4-201ENST00000228437 CYP26C1Q6V0L0 522 aa16.4■□□□□ 0.22
PRDM4-201ENST00000228437 DENND2AQ9ULE3 1009 aa16.4■□□□□ 0.22
PRDM4-201ENST00000228437 C2orf54Q08AI8 447 aa16.39■□□□□ 0.21
PRDM4-201ENST00000228437 KIF5AQ12840 1032 aa16.39■□□□□ 0.21
PRDM4-201ENST00000228437 TMTC1Q8IUR5 882 aa16.39■□□□□ 0.21
PRDM4-201ENST00000228437 CWC25Q9NXE8 425 aaPredicted RBP16.39■□□□□ 0.21
PRDM4-201ENST00000228437 KNDC1Q76NI1 1749 aa16.39■□□□□ 0.21
PRDM4-201ENST00000228437 KDRP35968 1356 aa16.39■□□□□ 0.21
PRDM4-201ENST00000228437 MCM7P33993 719 aa16.39■□□□□ 0.21
PRDM4-201ENST00000228437 GUCY2FP51841 1108 aa16.39■□□□□ 0.21
PRDM4-201ENST00000228437 CKAP4Q07065 602 aaKnown RBP16.39■□□□□ 0.21
PRDM4-201ENST00000228437 WTAPQ15007 396 aa16.39■□□□□ 0.21
PRDM4-201ENST00000228437 ILDR1Q86SU0 546 aaPredicted RBP16.39■□□□□ 0.21
PRDM4-201ENST00000228437 MIGA1Q8NAN2 632 aa16.39■□□□□ 0.21
PRDM4-201ENST00000228437 A0A087WUV0 522 aaPredicted RBP16.39■□□□□ 0.21
PRDM4-201ENST00000228437 GRIN1Q05586 938 aa16.39■□□□□ 0.21
PRDM4-201ENST00000228437 MFSD6Q6ZSS7 791 aa16.39■□□□□ 0.21
PRDM4-201ENST00000228437 KLHL34Q8N239 644 aa16.39■□□□□ 0.21
PRDM4-201ENST00000228437 FAM169AQ9Y6X4 670 aa16.39■□□□□ 0.21
PRDM4-201ENST00000228437 MROH2AA6NES4 1674 aa16.39■□□□□ 0.21
PRDM4-201ENST00000228437 MAP2P11137 1827 aaKnown RBP16.38■□□□□ 0.21
PRDM4-201ENST00000228437 PRDM1O75626 825 aa16.38■□□□□ 0.21
PRDM4-201ENST00000228437 CYP27A1Q02318 531 aa16.38■□□□□ 0.21
PRDM4-201ENST00000228437 IFIT5Q13325 482 aaKnown RBP16.38■□□□□ 0.21
PRDM4-201ENST00000228437 TOM1L2Q6ZVM7 507 aa16.38■□□□□ 0.21
PRDM4-201ENST00000228437 USP49Q70CQ1 688 aa16.38■□□□□ 0.21
PRDM4-201ENST00000228437 EFCAB13Q8IY85 973 aa16.38■□□□□ 0.21
PRDM4-201ENST00000228437 JAKMIP2Q96AA8 810 aa16.38■□□□□ 0.21
PRDM4-201ENST00000228437 CCDC113Q9H0I3 377 aa16.38■□□□□ 0.21
PRDM4-201ENST00000228437 MED4Q9NPJ6 270 aa16.38■□□□□ 0.21
PRDM4-201ENST00000228437 PPANQ9NQ55 473 aaKnown RBP16.38■□□□□ 0.21
PRDM4-201ENST00000228437 VPS54Q9P1Q0 977 aa16.38■□□□□ 0.21
PRDM4-201ENST00000228437 ATP6V1AP38606 617 aa16.38■□□□□ 0.21
PRDM4-201ENST00000228437 WHAMMP3Q1A5X7 153 aa16.38■□□□□ 0.21
PRDM4-201ENST00000228437 BEND6Q5SZJ8 279 aaPredicted RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms