RNA–Protein interactions for RNA: ENST00000221494.9

SF3A2-201, Transcript of splicing factor 3a subunit 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SF3A2, Length 1,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-201ENST00000221494 OLFM4Q6UX06 510 aa18.27■□□□□ 0.52
SF3A2-201ENST00000221494 RABGGTAQ92696 567 aa18.27■□□□□ 0.52
SF3A2-201ENST00000221494 SETDB2Q96T68 719 aa18.27■□□□□ 0.52
SF3A2-201ENST00000221494 PSD3Q9NYI0 1048 aa18.27■□□□□ 0.52
SF3A2-201ENST00000221494 GOLIM4O00461 696 aa18.26■□□□□ 0.51
SF3A2-201ENST00000221494 STX10O60499 249 aa18.26■□□□□ 0.51
SF3A2-201ENST00000221494 TOP1P11387 765 aaKnown RBP18.26■□□□□ 0.51
SF3A2-201ENST00000221494 SYKP43405 635 aa18.26■□□□□ 0.51
SF3A2-201ENST00000221494 FOSBP53539 338 aa18.26■□□□□ 0.51
SF3A2-201ENST00000221494 IRX5P78411 483 aaPredicted RBP18.26■□□□□ 0.51
SF3A2-201ENST00000221494 GUCY1B3Q02153 619 aa18.26■□□□□ 0.51
SF3A2-201ENST00000221494 TUBB2AQ13885 445 aa18.26■□□□□ 0.51
SF3A2-201ENST00000221494 IMMTQ16891 758 aaKnown RBP18.26■□□□□ 0.51
SF3A2-201ENST00000221494 ERFEQ4G0M1 354 aa18.26■□□□□ 0.51
SF3A2-201ENST00000221494 LDHAL6AQ6ZMR3 332 aa18.26■□□□□ 0.51
SF3A2-201ENST00000221494 TUBB2BQ9BVA1 445 aa18.26■□□□□ 0.51
SF3A2-201ENST00000221494 CEP126Q9P2H0 1117 aa18.26■□□□□ 0.51
SF3A2-201ENST00000221494 A0A087WWV3 80 aa18.26■□□□□ 0.51
SF3A2-201ENST00000221494 CDKL5O76039 1030 aa18.26■□□□□ 0.51
SF3A2-201ENST00000221494 APBA3O96018 575 aa18.26■□□□□ 0.51
SF3A2-201ENST00000221494 SERPINC1P01008 464 aa18.26■□□□□ 0.51
SF3A2-201ENST00000221494 TIMM10P62072 90 aa18.26■□□□□ 0.51
SF3A2-201ENST00000221494 MAP3K9P80192 1104 aa18.26■□□□□ 0.51
SF3A2-201ENST00000221494 HOOK1Q9UJC3 728 aaKnown RBP18.26■□□□□ 0.51
SF3A2-201ENST00000221494 SCN7AQ01118 1682 aa18.25■□□□□ 0.51
SF3A2-201ENST00000221494 URI1O94763 535 aaPredicted RBP18.25■□□□□ 0.51
SF3A2-201ENST00000221494 LMOD1P29536 600 aaPredicted RBP18.25■□□□□ 0.51
SF3A2-201ENST00000221494 TBX2Q13207 712 aaPredicted RBP18.25■□□□□ 0.51
SF3A2-201ENST00000221494 SLC10A5Q5PT55 438 aa18.25■□□□□ 0.51
SF3A2-201ENST00000221494 MB21D2Q8IYB1 491 aaPredicted RBP18.25■□□□□ 0.51
SF3A2-201ENST00000221494 LRRN4CLQ8ND94 238 aa18.25■□□□□ 0.51
SF3A2-201ENST00000221494 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.25■□□□□ 0.51
SF3A2-201ENST00000221494 ECM29Q5VYK3 1845 aa18.25■□□□□ 0.51
SF3A2-201ENST00000221494 CCDC152Q4G0S7 254 aa18.24■□□□□ 0.51
SF3A2-201ENST00000221494 CC2D1AQ6P1N0 951 aaPredicted RBP18.24■□□□□ 0.51
SF3A2-201ENST00000221494 RSRC2Q7L4I2 434 aaKnown RBP18.24■□□□□ 0.51
SF3A2-201ENST00000221494 TMEM139Q8IV31 216 aa18.24■□□□□ 0.51
SF3A2-201ENST00000221494 ST7Q9NRC1 585 aa18.24■□□□□ 0.51
SF3A2-201ENST00000221494 DACH1Q9UI36 760 aa18.24■□□□□ 0.51
SF3A2-201ENST00000221494 PPP2R2CQ9Y2T4 447 aa18.24■□□□□ 0.51
SF3A2-201ENST00000221494 RTL9Q8NET4 1388 aa18.24■□□□□ 0.51
SF3A2-201ENST00000221494 POTEB2H3BUK9 544 aa18.24■□□□□ 0.51
SF3A2-201ENST00000221494 CPLX1O14810 134 aa18.24■□□□□ 0.51
SF3A2-201ENST00000221494 CUTAO60888 179 aa18.24■□□□□ 0.51
SF3A2-201ENST00000221494 CASQ1P31415 396 aa18.24■□□□□ 0.51
SF3A2-201ENST00000221494 CFAP100Q494V2 611 aa18.24■□□□□ 0.51
SF3A2-201ENST00000221494 NCOA7Q8NI08 942 aa18.24■□□□□ 0.51
SF3A2-201ENST00000221494 ERCC4Q92889 916 aaPredicted RBP18.24■□□□□ 0.51
SF3A2-201ENST00000221494 CARD6Q9BX69 1037 aa18.24■□□□□ 0.51
SF3A2-201ENST00000221494 HPS5Q9UPZ3 1129 aa18.24■□□□□ 0.51
SF3A2-201ENST00000221494 MRFAP1Q9Y605 127 aa18.24■□□□□ 0.51
SF3A2-201ENST00000221494 A0A1B0GUL7 405 aa18.23■□□□□ 0.51
SF3A2-201ENST00000221494 VWA3AA6NCI4 1184 aa18.23■□□□□ 0.51
SF3A2-201ENST00000221494 GOLGA8BA8MQT2 603 aa18.23■□□□□ 0.51
SF3A2-201ENST00000221494 IFIT1P09914 478 aaKnown RBP18.23■□□□□ 0.51
SF3A2-201ENST00000221494 HMGB2P26583 209 aaKnown RBP18.23■□□□□ 0.51
SF3A2-201ENST00000221494 BRD3Q15059 726 aa18.23■□□□□ 0.51
SF3A2-201ENST00000221494 CT47A1Q5JQC4 288 aaPredicted RBP18.23■□□□□ 0.51
SF3A2-201ENST00000221494 RESP18Q5W5W9 173 aa18.23■□□□□ 0.51
SF3A2-201ENST00000221494 NEUROD6Q96NK8 337 aa18.23■□□□□ 0.51
SF3A2-201ENST00000221494 NYXQ9GZU5 481 aa18.23■□□□□ 0.51
SF3A2-201ENST00000221494 ARFGAP3Q9NP61 516 aa18.23■□□□□ 0.51
SF3A2-201ENST00000221494 SEC31BQ9NQW1 1179 aa18.23■□□□□ 0.51
SF3A2-201ENST00000221494 MROH7-TTC4A0A0A0MT08 1334 aa18.23■□□□□ 0.51
SF3A2-201ENST00000221494 KLF18A0A0U1RQI7 1052 aa18.22■□□□□ 0.51
SF3A2-201ENST00000221494 ERICH4A6NGS2 130 aa18.22■□□□□ 0.51
SF3A2-201ENST00000221494 PRC1O43663 620 aa18.22■□□□□ 0.51
SF3A2-201ENST00000221494 HNRNPH2P55795 449 aaKnown RBP18.22■□□□□ 0.51
SF3A2-201ENST00000221494 SF3B3Q15393 1217 aaKnown RBP18.22■□□□□ 0.51
SF3A2-201ENST00000221494 C3orf67Q6ZVT6 689 aa18.22■□□□□ 0.51
SF3A2-201ENST00000221494 CNNM1Q9NRU3 951 aa18.22■□□□□ 0.51
SF3A2-201ENST00000221494 ZMYM6O95789 1325 aa18.22■□□□□ 0.51
SF3A2-201ENST00000221494 CCDC151A5D8V7 595 aa18.22■□□□□ 0.51
SF3A2-201ENST00000221494 BIN1O00499 593 aa18.22■□□□□ 0.51
SF3A2-201ENST00000221494 NPHP1O15259 732 aa18.22■□□□□ 0.51
SF3A2-201ENST00000221494 TBC1D8O95759 1140 aa18.22■□□□□ 0.51
SF3A2-201ENST00000221494 POLR3DP05423 398 aaPredicted RBP18.22■□□□□ 0.51
SF3A2-201ENST00000221494 RIC1Q4ADV7 1423 aa18.22■□□□□ 0.51
SF3A2-201ENST00000221494 CPLX2Q6PUV4 134 aaKnown RBP18.22■□□□□ 0.51
SF3A2-201ENST00000221494 NBPF5PQ86XG9 351 aaPredicted RBP18.22■□□□□ 0.51
SF3A2-201ENST00000221494 VGLL2Q8N8G2 317 aa18.22■□□□□ 0.51
SF3A2-201ENST00000221494 GOLGA1Q92805 767 aa18.22■□□□□ 0.51
SF3A2-201ENST00000221494 FBXW7Q969H0 707 aa18.22■□□□□ 0.51
SF3A2-201ENST00000221494 EXOC4Q96A65 974 aa18.22■□□□□ 0.51
SF3A2-201ENST00000221494 AKAP2Q9Y2D5 859 aa18.22■□□□□ 0.51
SF3A2-201ENST00000221494 NDUFB9Q9Y6M9 179 aa18.22■□□□□ 0.51
SF3A2-201ENST00000221494 ATP1A3P13637 1013 aa18.21■□□□□ 0.51
SF3A2-201ENST00000221494 NFIXQ14938 502 aa18.21■□□□□ 0.51
SF3A2-201ENST00000221494 PTPAQ15257 358 aa18.21■□□□□ 0.51
SF3A2-201ENST00000221494 METTL24Q5JXM2 366 aa18.21■□□□□ 0.51
SF3A2-201ENST00000221494 TPTE2Q6XPS3 522 aa18.21■□□□□ 0.51
SF3A2-201ENST00000221494 TRIML1Q8N9V2 468 aa18.21■□□□□ 0.51
SF3A2-201ENST00000221494 BAG1Q99933 345 aaPredicted RBP18.21■□□□□ 0.51
SF3A2-201ENST00000221494 CWC15Q9P013 229 aaKnown RBP18.21■□□□□ 0.51
SF3A2-201ENST00000221494 WDHD1O75717 1129 aaPredicted RBP18.21■□□□□ 0.5
SF3A2-201ENST00000221494 CHGBP05060 677 aa18.21■□□□□ 0.5
SF3A2-201ENST00000221494 GYS1P13807 737 aa18.21■□□□□ 0.5
SF3A2-201ENST00000221494 PPP2R3AQ06190 1150 aa18.21■□□□□ 0.5
SF3A2-201ENST00000221494 CCDC102BQ68D86 513 aa18.21■□□□□ 0.5
SF3A2-201ENST00000221494 RALYLQ86SE5 291 aaKnown RBP18.21■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms