RNA–Protein interactions for RNA: ENST00000217315.9

TM9SF4-201, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2 BASIC

Gene TM9SF4, Length 4,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-201ENST00000217315 TRIM47Q96LD4 638 aa14.06□□□□□ -0.16
TM9SF4-201ENST00000217315 ANKRD2Q9GZV1 360 aa14.06□□□□□ -0.16
TM9SF4-201ENST00000217315 CALML3P27482 149 aa14.06□□□□□ -0.16
TM9SF4-201ENST00000217315 ST3GAL1Q11201 340 aa14.06□□□□□ -0.16
TM9SF4-201ENST00000217315 ARID5BQ14865 1188 aa14.06□□□□□ -0.16
TM9SF4-201ENST00000217315 RBM28Q9NW13 759 aaKnown RBP14.06□□□□□ -0.16
TM9SF4-201ENST00000217315 VIRMAQ69YN4 1812 aaKnown RBP14.06□□□□□ -0.16
TM9SF4-201ENST00000217315 CYP19A1P11511 503 aaPredicted RBP14.06□□□□□ -0.16
TM9SF4-201ENST00000217315 GNAQP50148 359 aa14.06□□□□□ -0.16
TM9SF4-201ENST00000217315 COL9A3Q14050 684 aaPredicted RBP14.06□□□□□ -0.16
TM9SF4-201ENST00000217315 CYB5R4Q7L1T6 521 aa14.06□□□□□ -0.16
TM9SF4-201ENST00000217315 MB21D2Q8IYB1 491 aaPredicted RBP14.06□□□□□ -0.16
TM9SF4-201ENST00000217315 ZMYND15Q9H091 742 aa14.06□□□□□ -0.16
TM9SF4-201ENST00000217315 BMP2KQ9NSY1 1161 aaPredicted RBP14.06□□□□□ -0.16
TM9SF4-201ENST00000217315 SAP30BPQ9UHR5 308 aaKnown RBP14.06□□□□□ -0.16
TM9SF4-201ENST00000217315 ERVV-1B6SEH8 477 aa14.06□□□□□ -0.16
TM9SF4-201ENST00000217315 IGSF3O75054 1194 aa14.06□□□□□ -0.16
TM9SF4-201ENST00000217315 NR5A1Q13285 461 aa14.06□□□□□ -0.16
TM9SF4-201ENST00000217315 PTPN21Q16825 1174 aa14.06□□□□□ -0.16
TM9SF4-201ENST00000217315 NOM1Q5C9Z4 860 aaKnown RBP14.06□□□□□ -0.16
TM9SF4-201ENST00000217315 PALLDQ8WX93 1383 aa14.06□□□□□ -0.16
TM9SF4-201ENST00000217315 CCDC94Q9BW85 323 aaPredicted RBP14.06□□□□□ -0.16
TM9SF4-201ENST00000217315 RIPOR2Q9Y4F9 1068 aa14.06□□□□□ -0.16
TM9SF4-201ENST00000217315 GOLGA6L9A6NEM1 432 aa14.05□□□□□ -0.16
TM9SF4-201ENST00000217315 MTIF2P46199 727 aaKnown RBP14.05□□□□□ -0.16
TM9SF4-201ENST00000217315 NAPAP54920 295 aa14.05□□□□□ -0.16
TM9SF4-201ENST00000217315 RBM6P78332 1123 aaKnown RBP14.05□□□□□ -0.16
TM9SF4-201ENST00000217315 PDE4CQ08493 712 aa14.05□□□□□ -0.16
TM9SF4-201ENST00000217315 CRACR2BQ8N4Y2 399 aaPredicted RBP14.05□□□□□ -0.16
TM9SF4-201ENST00000217315 BAG1Q99933 345 aaPredicted RBP14.05□□□□□ -0.16
TM9SF4-201ENST00000217315 FANCLQ9NW38 375 aa14.05□□□□□ -0.16
TM9SF4-201ENST00000217315 IMPACTQ9P2X3 320 aa14.05□□□□□ -0.16
TM9SF4-201ENST00000217315 CCT6AP40227 531 aaKnown RBP14.05□□□□□ -0.16
TM9SF4-201ENST00000217315 GSTO1P78417 241 aa14.05□□□□□ -0.16
TM9SF4-201ENST00000217315 PICALMQ13492 652 aa14.05□□□□□ -0.16
TM9SF4-201ENST00000217315 TTC38Q5R3I4 469 aa14.05□□□□□ -0.16
TM9SF4-201ENST00000217315 LZTFL1Q9NQ48 299 aa14.05□□□□□ -0.16
TM9SF4-201ENST00000217315 CCNL1Q9UK58 526 aaPredicted RBP14.05□□□□□ -0.16
TM9SF4-201ENST00000217315 U2AF2P26368 475 aaKnown RBP eCLIP14.05□□□□□ -0.16
TM9SF4-201ENST00000217315 CCDC178Q5BJE1 867 aa14.05□□□□□ -0.16
TM9SF4-201ENST00000217315 MLKLQ8NB16 471 aa14.05□□□□□ -0.16
TM9SF4-201ENST00000217315 PYM1Q9BRP8 204 aaKnown RBP14.05□□□□□ -0.16
TM9SF4-201ENST00000217315 ZNF219Q9P2Y4 722 aaPredicted RBP14.05□□□□□ -0.16
TM9SF4-201ENST00000217315 NRXN3Q9Y4C0 1643 aa14.04□□□□□ -0.16
TM9SF4-201ENST00000217315 CYP2D7A0A087X1C5 515 aa14.04□□□□□ -0.16
TM9SF4-201ENST00000217315 UBAP1LF5GYI3 381 aa14.04□□□□□ -0.16
TM9SF4-201ENST00000217315 TOM1O60784 492 aa14.04□□□□□ -0.16
TM9SF4-201ENST00000217315 DYNLL1P63167 89 aaKnown RBP14.04□□□□□ -0.16
TM9SF4-201ENST00000217315 KRBA2Q6ZNG9 492 aa14.04□□□□□ -0.16
TM9SF4-201ENST00000217315 CCDC148Q8NFR7 591 aa14.04□□□□□ -0.16
TM9SF4-201ENST00000217315 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.04□□□□□ -0.16
TM9SF4-201ENST00000217315 ERICH4A6NGS2 130 aa14.04□□□□□ -0.16
TM9SF4-201ENST00000217315 SLF2Q8IX21 1173 aa14.04□□□□□ -0.16
TM9SF4-201ENST00000217315 CTAGE1Q96RT6 745 aa14.04□□□□□ -0.16
TM9SF4-201ENST00000217315 ZSCAN10Q96SZ4 725 aaPredicted RBP14.04□□□□□ -0.16
TM9SF4-201ENST00000217315 PEAK1Q9H792 1746 aa14.03□□□□□ -0.16
TM9SF4-201ENST00000217315 POLR3GO15318 223 aaPredicted RBP14.03□□□□□ -0.16
TM9SF4-201ENST00000217315 CTDNEP1O95476 244 aa14.03□□□□□ -0.16
TM9SF4-201ENST00000217315 DTHD1Q6ZMT9 781 aa14.03□□□□□ -0.16
TM9SF4-201ENST00000217315 ZNF804AQ7Z570 1209 aa14.03□□□□□ -0.16
TM9SF4-201ENST00000217315 ACBD3Q9H3P7 528 aa14.03□□□□□ -0.16
TM9SF4-201ENST00000217315 RMND1Q9NWS8 449 aa14.03□□□□□ -0.16
TM9SF4-201ENST00000217315 TFAP4Q01664 338 aa14.03□□□□□ -0.16
TM9SF4-201ENST00000217315 NEDD4P46934 1319 aa14.03□□□□□ -0.16
TM9SF4-201ENST00000217315 TNNT3P45378 269 aaPredicted RBP14.03□□□□□ -0.16
TM9SF4-201ENST00000217315 TICAM2Q86XR7 235 aa14.03□□□□□ -0.16
TM9SF4-201ENST00000217315 CALML4Q96GE6 196 aa14.03□□□□□ -0.16
TM9SF4-201ENST00000217315 ZHX1Q9UKY1 873 aaPredicted RBP14.03□□□□□ -0.16
TM9SF4-201ENST00000217315 CCDC175P0C221 793 aa14.02□□□□□ -0.16
TM9SF4-201ENST00000217315 IFNAR1P17181 557 aa14.02□□□□□ -0.16
TM9SF4-201ENST00000217315 CDC27P30260 824 aa14.02□□□□□ -0.16
TM9SF4-201ENST00000217315 PPP2R5BQ15173 497 aa14.02□□□□□ -0.16
TM9SF4-201ENST00000217315 TMEM266Q2M3C6 531 aa14.02□□□□□ -0.16
TM9SF4-201ENST00000217315 FKBP15Q5T1M5 1219 aa14.02□□□□□ -0.16
TM9SF4-201ENST00000217315 ERLIN1O75477 346 aa14.02□□□□□ -0.17
TM9SF4-201ENST00000217315 SPAG1Q07617 926 aa14.02□□□□□ -0.17
TM9SF4-201ENST00000217315 ERFEQ4G0M1 354 aa14.02□□□□□ -0.17
TM9SF4-201ENST00000217315 FMR1NBQ8N0W7 255 aaPredicted RBP14.02□□□□□ -0.17
TM9SF4-201ENST00000217315 RAB34Q9BZG1 259 aa14.02□□□□□ -0.17
TM9SF4-201ENST00000217315 VPS16Q9H269 839 aa14.02□□□□□ -0.17
TM9SF4-201ENST00000217315 TCEAL9Q9UHQ7 104 aa14.02□□□□□ -0.17
TM9SF4-201ENST00000217315 TRIM21P19474 475 aaKnown RBP14.02□□□□□ -0.17
TM9SF4-201ENST00000217315 LIFRP42702 1097 aa14.02□□□□□ -0.17
TM9SF4-201ENST00000217315 IGSF22Q8N9C0 903 aa14.02□□□□□ -0.17
TM9SF4-201ENST00000217315 CNBD1Q8NA66 436 aa14.02□□□□□ -0.17
TM9SF4-201ENST00000217315 ZNF397Q8NF99 534 aaPredicted RBP14.02□□□□□ -0.17
TM9SF4-201ENST00000217315 ZBTB9Q96C00 473 aa14.02□□□□□ -0.17
TM9SF4-201ENST00000217315 PSMA7O14818 248 aa14.01□□□□□ -0.17
TM9SF4-201ENST00000217315 ATP1A3P13637 1013 aa14.01□□□□□ -0.17
TM9SF4-201ENST00000217315 ADKP55263 362 aaKnown RBP14.01□□□□□ -0.17
TM9SF4-201ENST00000217315 ASIC1P78348 528 aa14.01□□□□□ -0.17
TM9SF4-201ENST00000217315 ELF2Q15723 593 aa14.01□□□□□ -0.17
TM9SF4-201ENST00000217315 ENOX2Q16206 610 aaKnown RBP14.01□□□□□ -0.17
TM9SF4-201ENST00000217315 CCDC43Q96MW1 224 aaKnown RBP14.01□□□□□ -0.17
TM9SF4-201ENST00000217315 BLZF1Q9H2G9 400 aa14.01□□□□□ -0.17
TM9SF4-201ENST00000217315 CDHR2Q9BYE9 1310 aa14.01□□□□□ -0.17
TM9SF4-201ENST00000217315 FMNL1O95466 1100 aaPredicted RBP14.01□□□□□ -0.17
TM9SF4-201ENST00000217315 UBE4AQ14139 1066 aa14.01□□□□□ -0.17
TM9SF4-201ENST00000217315 LETM2Q2VYF4 491 aa14.01□□□□□ -0.17
TM9SF4-201ENST00000217315 TRAPPC3LQ5T215 181 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms