RNA–Protein interactions for RNA: ENST00000216294.4

SNAPC1-201, Transcript of small nuclear RNA activating complex polypeptide 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC1, Length 2,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC1-201ENST00000216294 USP21Q9UK80 565 aa18.22■□□□□ 0.51
SNAPC1-201ENST00000216294 ECM29Q5VYK3 1845 aa18.22■□□□□ 0.51
SNAPC1-201ENST00000216294 A0A0U1RQJ8 604 aa18.22■□□□□ 0.51
SNAPC1-201ENST00000216294 GOLGA8AA7E2F4 631 aa18.22■□□□□ 0.51
SNAPC1-201ENST00000216294 IARSP41252 1262 aaKnown RBP18.22■□□□□ 0.51
SNAPC1-201ENST00000216294 FMR1Q06787 632 aaKnown RBP eCLIP18.22■□□□□ 0.51
SNAPC1-201ENST00000216294 NTRK3Q16288 839 aa18.22■□□□□ 0.51
SNAPC1-201ENST00000216294 FNBP4Q8N3X1 1017 aaPredicted RBP18.22■□□□□ 0.51
SNAPC1-201ENST00000216294 CNNM3Q8NE01 707 aa18.22■□□□□ 0.51
SNAPC1-201ENST00000216294 ATRIPQ8WXE1 791 aa18.22■□□□□ 0.51
SNAPC1-201ENST00000216294 DESI2Q9BSY9 194 aa18.22■□□□□ 0.51
SNAPC1-201ENST00000216294 EPB41L4AQ9HCS5 686 aaPredicted RBP18.22■□□□□ 0.51
SNAPC1-201ENST00000216294 RREB1Q92766 1687 aa18.21■□□□□ 0.51
SNAPC1-201ENST00000216294 FAM205CA6NFA0 338 aa18.21■□□□□ 0.51
SNAPC1-201ENST00000216294 ZBTB43O43298 467 aa18.21■□□□□ 0.51
SNAPC1-201ENST00000216294 PDE6AP16499 860 aa18.21■□□□□ 0.51
SNAPC1-201ENST00000216294 CLCN6P51797 869 aa18.21■□□□□ 0.51
SNAPC1-201ENST00000216294 CCDC150Q8NCX0 1101 aa18.21■□□□□ 0.51
SNAPC1-201ENST00000216294 IGDCC4Q8TDY8 1250 aa18.21■□□□□ 0.51
SNAPC1-201ENST00000216294 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.21■□□□□ 0.51
SNAPC1-201ENST00000216294 HPSEQ9Y251 543 aa18.21■□□□□ 0.51
SNAPC1-201ENST00000216294 ZFYP08048 801 aaPredicted RBP18.21■□□□□ 0.51
SNAPC1-201ENST00000216294 CCDC102BQ68D86 513 aa18.21■□□□□ 0.51
SNAPC1-201ENST00000216294 TRIM65Q6PJ69 517 aa18.21■□□□□ 0.51
SNAPC1-201ENST00000216294 BPIFA3Q9BQP9 254 aa18.21■□□□□ 0.51
SNAPC1-201ENST00000216294 CARD6Q9BX69 1037 aa18.21■□□□□ 0.51
SNAPC1-201ENST00000216294 LY9Q9HBG7 655 aa18.21■□□□□ 0.51
SNAPC1-201ENST00000216294 KCNH3Q9ULD8 1083 aa18.21■□□□□ 0.51
SNAPC1-201ENST00000216294 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.21■□□□□ 0.512e-6■■■□□ 16
SNAPC1-201ENST00000216294 MYH3P11055 1940 aa18.21■□□□□ 0.51
SNAPC1-201ENST00000216294 GOLGB1Q14789 3259 aaKnown RBP18.2■□□□□ 0.5
SNAPC1-201ENST00000216294 NTSR2O95665 410 aa18.2■□□□□ 0.5
SNAPC1-201ENST00000216294 TOB1P50616 345 aaPredicted RBP18.2■□□□□ 0.5
SNAPC1-201ENST00000216294 MYL5Q02045 173 aa18.2■□□□□ 0.5
SNAPC1-201ENST00000216294 KRT222Q8N1A0 295 aa18.2■□□□□ 0.5
SNAPC1-201ENST00000216294 FBXL16Q8N461 479 aa18.2■□□□□ 0.5
SNAPC1-201ENST00000216294 MIGA1Q8NAN2 632 aa18.2■□□□□ 0.5
SNAPC1-201ENST00000216294 OXER1Q8TDS5 423 aa18.2■□□□□ 0.5
SNAPC1-201ENST00000216294 IRX2Q9BZI1 471 aaPredicted RBP18.2■□□□□ 0.5
SNAPC1-201ENST00000216294 IFIT3O14879 490 aaKnown RBP18.2■□□□□ 0.5
SNAPC1-201ENST00000216294 ZBTB22O15209 634 aa18.2■□□□□ 0.5
SNAPC1-201ENST00000216294 PDE8BO95263 885 aa18.2■□□□□ 0.5
SNAPC1-201ENST00000216294 MTF1Q14872 753 aa18.2■□□□□ 0.5
SNAPC1-201ENST00000216294 CCDC93Q567U6 631 aa18.2■□□□□ 0.5
SNAPC1-201ENST00000216294 MAGEB6Q8N7X4 407 aa18.2■□□□□ 0.5
SNAPC1-201ENST00000216294 TUBE1Q9UJT0 475 aa18.2■□□□□ 0.5
SNAPC1-201ENST00000216294 WTIPA6NIX2 430 aaPredicted RBP18.19■□□□□ 0.5
SNAPC1-201ENST00000216294 POLR2DO15514 142 aaKnown RBP18.19■□□□□ 0.5
SNAPC1-201ENST00000216294 TPM4P67936 248 aa18.19■□□□□ 0.5
SNAPC1-201ENST00000216294 TOGARAM2Q6ZUX3 1019 aa18.19■□□□□ 0.5
SNAPC1-201ENST00000216294 REXO1L1PQ8IX06 675 aa18.19■□□□□ 0.5
SNAPC1-201ENST00000216294 AIDAQ96BJ3 306 aa18.19■□□□□ 0.5
SNAPC1-201ENST00000216294 WDR24Q96S15 920 aa18.19■□□□□ 0.5
SNAPC1-201ENST00000216294 SERTAD1Q9UHV2 236 aa18.19■□□□□ 0.5
SNAPC1-201ENST00000216294 MBD4O95243 580 aa18.19■□□□□ 0.5
SNAPC1-201ENST00000216294 TOP1P11387 765 aaKnown RBP18.19■□□□□ 0.5
SNAPC1-201ENST00000216294 TERF2Q15554 542 aa18.19■□□□□ 0.5
SNAPC1-201ENST00000216294 PARP10Q53GL7 1025 aa18.19■□□□□ 0.5
SNAPC1-201ENST00000216294 RESP18Q5W5W9 173 aa18.19■□□□□ 0.5
SNAPC1-201ENST00000216294 CHMP4CQ96CF2 233 aa18.19■□□□□ 0.5
SNAPC1-201ENST00000216294 MED15Q96RN5 788 aa18.19■□□□□ 0.5
SNAPC1-201ENST00000216294 ZSWIM4Q9H7M6 989 aa18.19■□□□□ 0.5
SNAPC1-201ENST00000216294 L2HGDHQ9H9P8 463 aa18.19■□□□□ 0.5
SNAPC1-201ENST00000216294 SAMSN1Q9NSI8 373 aaKnown RBP18.19■□□□□ 0.5
SNAPC1-201ENST00000216294 PCDHB6Q9Y5E3 794 aa18.19■□□□□ 0.5
SNAPC1-201ENST00000216294 KRBA2Q6ZNG9 492 aa18.18■□□□□ 0.5
SNAPC1-201ENST00000216294 NUP133Q8WUM0 1156 aa18.18■□□□□ 0.5
SNAPC1-201ENST00000216294 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.18■□□□□ 0.5
SNAPC1-201ENST00000216294 CICQ96RK0 1608 aaPredicted RBP18.18■□□□□ 0.5
SNAPC1-201ENST00000216294 ETF1P62495 437 aaKnown RBP18.18■□□□□ 0.5
SNAPC1-201ENST00000216294 KARSQ15046 597 aaKnown RBP18.18■□□□□ 0.5
SNAPC1-201ENST00000216294 STX17P56962 302 aa18.17■□□□□ 0.5
SNAPC1-201ENST00000216294 VSTM4Q8IW00 320 aa18.17■□□□□ 0.5
SNAPC1-201ENST00000216294 CPLX3Q8WVH0 158 aa18.17■□□□□ 0.5
SNAPC1-201ENST00000216294 STAMQ92783 540 aa18.17■□□□□ 0.5
SNAPC1-201ENST00000216294 STRBPQ96SI9 672 aaKnown RBP18.17■□□□□ 0.5
SNAPC1-201ENST00000216294 LRP5O75197 1615 aa18.17■□□□□ 0.5
SNAPC1-201ENST00000216294 TFRCP02786 760 aaKnown RBP18.17■□□□□ 0.5
SNAPC1-201ENST00000216294 SMYD4Q8IYR2 804 aaPredicted RBP18.17■□□□□ 0.5
SNAPC1-201ENST00000216294 AK7Q96M32 723 aa18.17■□□□□ 0.5
SNAPC1-201ENST00000216294 FHOD1Q9Y613 1164 aa18.17■□□□□ 0.5
SNAPC1-201ENST00000216294 SLC12A7Q9Y666 1083 aa18.17■□□□□ 0.5
SNAPC1-201ENST00000216294 COL5A3P25940 1745 aaPredicted RBP18.17■□□□□ 0.5
SNAPC1-201ENST00000216294 DDX60Q8IY21 1712 aaKnown RBP18.17■□□□□ 0.5
SNAPC1-201ENST00000216294 SPEF2Q9C093 1822 aa18.16■□□□□ 0.5
SNAPC1-201ENST00000216294 PSDA5PKW4 1024 aaPredicted RBP18.16■□□□□ 0.5
SNAPC1-201ENST00000216294 VWA3AA6NCI4 1184 aa18.16■□□□□ 0.5
SNAPC1-201ENST00000216294 TRIM29Q14134 588 aa18.16■□□□□ 0.5
SNAPC1-201ENST00000216294 LRRFIP1Q32MZ4 808 aaKnown RBP18.16■□□□□ 0.5
SNAPC1-201ENST00000216294 NOM1Q5C9Z4 860 aaKnown RBP18.16■□□□□ 0.5
SNAPC1-201ENST00000216294 KLHL10Q6JEL2 608 aa18.16■□□□□ 0.5
SNAPC1-201ENST00000216294 OLFM4Q6UX06 510 aa18.16■□□□□ 0.5
SNAPC1-201ENST00000216294 TMEM139Q8IV31 216 aa18.16■□□□□ 0.5
SNAPC1-201ENST00000216294 DIS3L2Q8IYB7 885 aaKnown RBP18.16■□□□□ 0.5
SNAPC1-201ENST00000216294 MAN1B1Q9UKM7 699 aa18.16■□□□□ 0.5
SNAPC1-201ENST00000216294 TCRBV5S4A2TA0A5A2 114 aa18.16■□□□□ 0.5
SNAPC1-201ENST00000216294 IKBKBO14920 756 aa18.16■□□□□ 0.5
SNAPC1-201ENST00000216294 POLR3GO15318 223 aaPredicted RBP18.16■□□□□ 0.5
SNAPC1-201ENST00000216294 CDK11BP21127 795 aaKnown RBP18.16■□□□□ 0.5
SNAPC1-201ENST00000216294 BICDL1Q6ZP65 573 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms