RNA–Protein interactions for RNA: ENST00000216038.5

RTCB-201, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTCB, Length 2,027 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-201ENST00000216038 EAPPQ56P03 285 aaPredicted RBP11.78□□□□□ -0.52
RTCB-201ENST00000216038 CHST3Q7LGC8 479 aa11.78□□□□□ -0.52
RTCB-201ENST00000216038 SLC44A5Q8NCS7 719 aa11.78□□□□□ -0.52
RTCB-201ENST00000216038 KCNB2Q92953 911 aa11.78□□□□□ -0.52
RTCB-201ENST00000216038 GGA3Q9NZ52 723 aa11.78□□□□□ -0.52
RTCB-201ENST00000216038 NEDD4P46934 1319 aa11.78□□□□□ -0.52
RTCB-201ENST00000216038 CNTNAP1P78357 1384 aa11.78□□□□□ -0.52
RTCB-201ENST00000216038 TPM2P07951 284 aa11.77□□□□□ -0.52
RTCB-201ENST00000216038 EPHX2P34913 555 aa11.77□□□□□ -0.52
RTCB-201ENST00000216038 MMP14P50281 582 aa11.77□□□□□ -0.52
RTCB-201ENST00000216038 ANAPC15P60006 121 aa11.77□□□□□ -0.52
RTCB-201ENST00000216038 PRAMEF18Q5VWM3 479 aa11.77□□□□□ -0.52
RTCB-201ENST00000216038 AMOTL1Q8IY63 956 aa11.77□□□□□ -0.52
RTCB-201ENST00000216038 B4E1Z4 1266 aa11.77□□□□□ -0.53
RTCB-201ENST00000216038 NEK4P51957 841 aa11.77□□□□□ -0.53
RTCB-201ENST00000216038 RASA3Q14644 834 aa11.77□□□□□ -0.53
RTCB-201ENST00000216038 SBK1Q52WX2 424 aa11.77□□□□□ -0.53
RTCB-201ENST00000216038 AKNAD1Q5T1N1 836 aa11.77□□□□□ -0.53
RTCB-201ENST00000216038 DLK2Q6UY11 383 aa11.77□□□□□ -0.53
RTCB-201ENST00000216038 MFSD6Q6ZSS7 791 aa11.77□□□□□ -0.53
RTCB-201ENST00000216038 LRRC2Q9BYS8 371 aa11.77□□□□□ -0.53
RTCB-201ENST00000216038 ISY1Q9ULR0 285 aaKnown RBP11.77□□□□□ -0.53
RTCB-201ENST00000216038 SCN4AP35499 1836 aa11.76□□□□□ -0.53
RTCB-201ENST00000216038 TSGA10IPQ3SY00 556 aa11.76□□□□□ -0.53
RTCB-201ENST00000216038 NEK1Q96PY6 1258 aa11.76□□□□□ -0.53
RTCB-201ENST00000216038 CSRNP1Q96S65 589 aa11.76□□□□□ -0.53
RTCB-201ENST00000216038 LARP6Q9BRS8 491 aaKnown RBP11.76□□□□□ -0.53
RTCB-201ENST00000216038 TAF1DQ9H5J8 278 aaPredicted RBP11.76□□□□□ -0.53
RTCB-201ENST00000216038 RRAGCQ9HB90 399 aa11.76□□□□□ -0.53
RTCB-201ENST00000216038 ANAPC4Q9UJX5 808 aa11.76□□□□□ -0.53
RTCB-201ENST00000216038 MYH8P13535 1937 aa11.76□□□□□ -0.53
RTCB-201ENST00000216038 SIPA1L1O43166 1804 aa11.76□□□□□ -0.53
RTCB-201ENST00000216038 ENTPD3O75355 529 aa11.76□□□□□ -0.53
RTCB-201ENST00000216038 POTEIP0CG38 1075 aa11.76□□□□□ -0.53
RTCB-201ENST00000216038 POTEJP0CG39 1038 aa11.76□□□□□ -0.53
RTCB-201ENST00000216038 KRT32Q14532 448 aa11.76□□□□□ -0.53
RTCB-201ENST00000216038 NOL8Q76FK4 1167 aaKnown RBP11.76□□□□□ -0.53
RTCB-201ENST00000216038 FAM151AQ8WW52 585 aa11.76□□□□□ -0.53
RTCB-201ENST00000216038 DEFB129Q9H1M3 183 aa11.76□□□□□ -0.53
RTCB-201ENST00000216038 IQCA1LA6NCM1 817 aa11.75□□□□□ -0.53
RTCB-201ENST00000216038 RANBP6O60518 1105 aaKnown RBP11.75□□□□□ -0.53
RTCB-201ENST00000216038 KDM4AO75164 1064 aa11.75□□□□□ -0.53
RTCB-201ENST00000216038 CD2BP2O95400 341 aaKnown RBP11.75□□□□□ -0.53
RTCB-201ENST00000216038 HLA-DOAP06340 250 aa11.75□□□□□ -0.53
RTCB-201ENST00000216038 SLC4A3P48751 1232 aa11.75□□□□□ -0.53
RTCB-201ENST00000216038 TRDNQ13061 729 aa11.75□□□□□ -0.53
RTCB-201ENST00000216038 FAM47AQ5JRC9 791 aa11.75□□□□□ -0.53
RTCB-201ENST00000216038 BLOC1S2Q6QNY1 142 aa11.75□□□□□ -0.53
RTCB-201ENST00000216038 MIGA2Q7L4E1 593 aa11.75□□□□□ -0.53
RTCB-201ENST00000216038 RALYLQ86SE5 291 aaKnown RBP11.75□□□□□ -0.53
RTCB-201ENST00000216038 TTC6Q86TZ1 520 aa11.75□□□□□ -0.53
RTCB-201ENST00000216038 NCOA7Q8NI08 942 aa11.75□□□□□ -0.53
RTCB-201ENST00000216038 STAG1Q8WVM7 1258 aa11.75□□□□□ -0.53
RTCB-201ENST00000216038 NMRK2Q9NPI5 230 aa11.75□□□□□ -0.53
RTCB-201ENST00000216038 SERPINB13Q9UIV8 391 aa11.75□□□□□ -0.53
RTCB-201ENST00000216038 CYP46A1Q9Y6A2 500 aa11.75□□□□□ -0.53
RTCB-201ENST00000216038 WDR90Q96KV7 1748 aa11.75□□□□□ -0.53
RTCB-201ENST00000216038 FSD2A1L4K1 749 aa11.74□□□□□ -0.53
RTCB-201ENST00000216038 SLC3A2P08195 630 aaKnown RBP11.74□□□□□ -0.53
RTCB-201ENST00000216038 PSMA5P28066 241 aa11.74□□□□□ -0.53
RTCB-201ENST00000216038 CDK8P49336 464 aa11.74□□□□□ -0.53
RTCB-201ENST00000216038 BECN1Q14457 450 aa11.74□□□□□ -0.53
RTCB-201ENST00000216038 RABEP1Q15276 862 aa11.74□□□□□ -0.53
RTCB-201ENST00000216038 FKBP1CQ5VVH2 108 aa11.74□□□□□ -0.53
RTCB-201ENST00000216038 RUFY3Q7L099 469 aa11.74□□□□□ -0.53
RTCB-201ENST00000216038 CYB5R4Q7L1T6 521 aa11.74□□□□□ -0.53
RTCB-201ENST00000216038 CRACR2BQ8N4Y2 399 aaPredicted RBP11.74□□□□□ -0.53
RTCB-201ENST00000216038 ZKSCAN3Q9BRR0 538 aa11.74□□□□□ -0.53
RTCB-201ENST00000216038 DHX36Q9H2U1 1008 aaKnown RBP11.74□□□□□ -0.53
RTCB-201ENST00000216038 MKNK2Q9HBH9 465 aa11.74□□□□□ -0.53
RTCB-201ENST00000216038 ZSWIM6Q9HCJ5 1215 aa11.74□□□□□ -0.53
RTCB-201ENST00000216038 PI4KBQ9UBF8 816 aa11.74□□□□□ -0.53
RTCB-201ENST00000216038 GOLGA6L3A6NEY3 463 aa11.74□□□□□ -0.53
RTCB-201ENST00000216038 NPM3O75607 178 aaKnown RBP11.74□□□□□ -0.53
RTCB-201ENST00000216038 TNNI2P48788 182 aa11.74□□□□□ -0.53
RTCB-201ENST00000216038 PDE4BQ07343 736 aa11.74□□□□□ -0.53
RTCB-201ENST00000216038 TNFAIP1Q13829 316 aa11.74□□□□□ -0.53
RTCB-201ENST00000216038 C16orf86Q6ZW13 317 aa11.74□□□□□ -0.53
RTCB-201ENST00000216038 USP50Q70EL3 339 aaPredicted RBP11.74□□□□□ -0.53
RTCB-201ENST00000216038 FAM83AQ86UY5 434 aa11.74□□□□□ -0.53
RTCB-201ENST00000216038 RNF41Q9H4P4 317 aaPredicted RBP11.74□□□□□ -0.53
RTCB-201ENST00000216038 DNAJC18Q9H819 358 aa11.74□□□□□ -0.53
RTCB-201ENST00000216038 GPHNQ9NQX3 736 aaPredicted RBP11.74□□□□□ -0.53
RTCB-201ENST00000216038 ZSWIM5Q9P217 1185 aa11.74□□□□□ -0.53
RTCB-201ENST00000216038 FZD1Q9UP38 647 aa11.74□□□□□ -0.53
RTCB-201ENST00000216038 CLEC11AQ9Y240 323 aa11.74□□□□□ -0.53
RTCB-201ENST00000216038 ADM5C9JUS6 153 aa11.73□□□□□ -0.53
RTCB-201ENST00000216038 VEGFAP15692 232 aaPredicted RBP11.73□□□□□ -0.53
RTCB-201ENST00000216038 RPS6KB1P23443 525 aa11.73□□□□□ -0.53
RTCB-201ENST00000216038 ANTXR2P58335 489 aa11.73□□□□□ -0.53
RTCB-201ENST00000216038 NBPF12Q5TAG4 269 aaPredicted RBP11.73□□□□□ -0.53
RTCB-201ENST00000216038 MB21D2Q8IYB1 491 aaPredicted RBP11.73□□□□□ -0.53
RTCB-201ENST00000216038 DCPSQ96C86 337 aaKnown RBP11.73□□□□□ -0.53
RTCB-201ENST00000216038 IL17RAQ96F46 866 aa11.73□□□□□ -0.53
RTCB-201ENST00000216038 TEPSINQ96N21 525 aa11.73□□□□□ -0.53
RTCB-201ENST00000216038 TM6SF1Q9BZW5 370 aa11.73□□□□□ -0.53
RTCB-201ENST00000216038 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.73□□□□□ -0.53
RTCB-201ENST00000216038 ATRNL1Q5VV63 1379 aa11.73□□□□□ -0.53
RTCB-201ENST00000216038 ROBO3Q96MS0 1386 aa11.73□□□□□ -0.53
RTCB-201ENST00000216038 PRC1O43663 620 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms