RNA–Protein interactions for RNA: ENST00000215829.7

SNRPD3-201, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD3, Length 1,763 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-201ENST00000215829 HSP90AA1P07900 732 aaKnown RBP18.81■□□□□ 0.6
SNRPD3-201ENST00000215829 CACNB3P54284 484 aa18.81■□□□□ 0.6
SNRPD3-201ENST00000215829 GPR162Q16538 588 aa18.81■□□□□ 0.6
SNRPD3-201ENST00000215829 TTC6Q86TZ1 520 aa18.81■□□□□ 0.6
SNRPD3-201ENST00000215829 BRF1Q92994 677 aa18.81■□□□□ 0.6
SNRPD3-201ENST00000215829 ZBED3Q96IU2 234 aaPredicted RBP18.81■□□□□ 0.6
SNRPD3-201ENST00000215829 MYOZ2Q9NPC6 264 aa18.81■□□□□ 0.6
SNRPD3-201ENST00000215829 SH2B1Q9NRF2 756 aaPredicted RBP18.81■□□□□ 0.6
SNRPD3-201ENST00000215829 RNF181Q9P0P0 153 aa18.81■□□□□ 0.6
SNRPD3-201ENST00000215829 FAM198AQ9UFP1 575 aa18.81■□□□□ 0.6
SNRPD3-201ENST00000215829 NT5C2P49902 561 aa18.8■□□□□ 0.6
SNRPD3-201ENST00000215829 GPC2Q8N158 579 aa18.8■□□□□ 0.6
SNRPD3-201ENST00000215829 DYNLL2Q96FJ2 89 aa18.8■□□□□ 0.6
SNRPD3-201ENST00000215829 TMEM87BQ96K49 555 aa18.8■□□□□ 0.6
SNRPD3-201ENST00000215829 MTA3Q9BTC8 594 aa18.8■□□□□ 0.6
SNRPD3-201ENST00000215829 SHTN1A0MZ66 631 aa18.79■□□□□ 0.6
SNRPD3-201ENST00000215829 PRDM1O75626 825 aa18.79■□□□□ 0.6
SNRPD3-201ENST00000215829 ME3Q16798 604 aa18.79■□□□□ 0.6
SNRPD3-201ENST00000215829 ZNF70Q9UC06 446 aaPredicted RBP18.79■□□□□ 0.6
SNRPD3-201ENST00000215829 CNOT7Q9UIV1 285 aaKnown RBP18.79■□□□□ 0.6
SNRPD3-201ENST00000215829 ENTPD3O75355 529 aa18.78■□□□□ 0.6
SNRPD3-201ENST00000215829 LARGE1O95461 756 aa18.78■□□□□ 0.6
SNRPD3-201ENST00000215829 EVCP57679 992 aa18.78■□□□□ 0.6
SNRPD3-201ENST00000215829 SPDYE2Q495Y8 402 aa18.78■□□□□ 0.6
SNRPD3-201ENST00000215829 C16orf86Q6ZW13 317 aa18.78■□□□□ 0.6
SNRPD3-201ENST00000215829 ZFPM1Q8IX07 1006 aa18.78■□□□□ 0.6
SNRPD3-201ENST00000215829 MICALL2Q8IY33 904 aa18.78■□□□□ 0.6
SNRPD3-201ENST00000215829 IGDCC4Q8TDY8 1250 aa18.78■□□□□ 0.6
SNRPD3-201ENST00000215829 ZNF287Q9HBT7 754 aa18.78■□□□□ 0.6
SNRPD3-201ENST00000215829 GPHNQ9NQX3 736 aaPredicted RBP18.78■□□□□ 0.6
SNRPD3-201ENST00000215829 TMOD2Q9NZR1 351 aa18.78■□□□□ 0.6
SNRPD3-201ENST00000215829 WNT10BO00744 389 aa18.78■□□□□ 0.6
SNRPD3-201ENST00000215829 GRIN3BO60391 1043 aa18.78■□□□□ 0.6
SNRPD3-201ENST00000215829 RANBP6O60518 1105 aaKnown RBP18.78■□□□□ 0.6
SNRPD3-201ENST00000215829 TCP10Q12799 353 aa18.78■□□□□ 0.6
SNRPD3-201ENST00000215829 C9orf131Q5VYM1 1079 aa18.78■□□□□ 0.6
SNRPD3-201ENST00000215829 INTS4Q96HW7 963 aaKnown RBP18.78■□□□□ 0.6
SNRPD3-201ENST00000215829 DHX36Q9H2U1 1008 aaKnown RBP18.78■□□□□ 0.6
SNRPD3-201ENST00000215829 MKNK2Q9HBH9 465 aa18.78■□□□□ 0.6
SNRPD3-201ENST00000215829 ANGEL1Q9UNK9 670 aaKnown RBP18.78■□□□□ 0.6
SNRPD3-201ENST00000215829 SH2B2O14492 632 aaPredicted RBP18.77■□□□□ 0.6
SNRPD3-201ENST00000215829 MYO1BO43795 1136 aa18.77■□□□□ 0.6
SNRPD3-201ENST00000215829 APOBRQ0VD83 1088 aa18.77■□□□□ 0.6
SNRPD3-201ENST00000215829 FOXD4L1Q9NU39 408 aa18.77■□□□□ 0.6
SNRPD3-201ENST00000215829 CLRN2A0PK11 232 aa18.76■□□□□ 0.59
SNRPD3-201ENST00000215829 IFIT3O14879 490 aaKnown RBP18.76■□□□□ 0.59
SNRPD3-201ENST00000215829 HLA-DOAP06340 250 aa18.76■□□□□ 0.59
SNRPD3-201ENST00000215829 CDK8P49336 464 aa18.76■□□□□ 0.59
SNRPD3-201ENST00000215829 GABPAQ06546 454 aa18.76■□□□□ 0.59
SNRPD3-201ENST00000215829 SART3Q15020 963 aaKnown RBP18.76■□□□□ 0.59
SNRPD3-201ENST00000215829 TMEM67Q5HYA8 995 aa18.76■□□□□ 0.59
SNRPD3-201ENST00000215829 FKBP1CQ5VVH2 108 aa18.76■□□□□ 0.59
SNRPD3-201ENST00000215829 ZNF274Q96GC6 653 aaPredicted RBP18.76■□□□□ 0.59
SNRPD3-201ENST00000215829 SLKQ9H2G2 1235 aaPredicted RBP18.76■□□□□ 0.59
SNRPD3-201ENST00000215829 LIFRP42702 1097 aa18.76■□□□□ 0.59
SNRPD3-201ENST00000215829 NBPF9Q3BBW0 867 aa18.76■□□□□ 0.59
SNRPD3-201ENST00000215829 ZNF444Q8N0Y2 327 aaPredicted RBP18.76■□□□□ 0.59
SNRPD3-201ENST00000215829 SLC44A5Q8NCS7 719 aa18.76■□□□□ 0.59
SNRPD3-201ENST00000215829 UBAC1Q9BSL1 405 aa18.76■□□□□ 0.59
SNRPD3-201ENST00000215829 LY9Q9HBG7 655 aa18.76■□□□□ 0.59
SNRPD3-201ENST00000215829 SERPINB13Q9UIV8 391 aa18.76■□□□□ 0.59
SNRPD3-201ENST00000215829 ERICH2A1L162 156 aa18.75■□□□□ 0.59
SNRPD3-201ENST00000215829 H7C1D1 291 aa18.75■□□□□ 0.59
SNRPD3-201ENST00000215829 FAM47AQ5JRC9 791 aa18.75■□□□□ 0.59
SNRPD3-201ENST00000215829 RBM26Q5T8P6 1007 aaKnown RBP18.75■□□□□ 0.59
SNRPD3-201ENST00000215829 SH3BP5LQ7L8J4 393 aa18.75■□□□□ 0.59
SNRPD3-201ENST00000215829 IQCA1Q86XH1 822 aa18.75■□□□□ 0.59
SNRPD3-201ENST00000215829 ZKSCAN3Q9BRR0 538 aa18.75■□□□□ 0.59
SNRPD3-201ENST00000215829 EHD4Q9H223 541 aa18.75■□□□□ 0.59
SNRPD3-201ENST00000215829 GPRC5DQ9NZD1 345 aa18.75■□□□□ 0.59
SNRPD3-201ENST00000215829 PI4KBQ9UBF8 816 aa18.75■□□□□ 0.59
SNRPD3-201ENST00000215829 ATRNL1Q5VV63 1379 aa18.74■□□□□ 0.59
SNRPD3-201ENST00000215829 DDTLA6NHG4 134 aaPredicted RBP18.74■□□□□ 0.59
SNRPD3-201ENST00000215829 TSPY2A6NKD2 308 aa18.74■□□□□ 0.59
SNRPD3-201ENST00000215829 TCP10L2B9ZVM9 353 aa18.74■□□□□ 0.59
SNRPD3-201ENST00000215829 EGFRP00533 1210 aa18.74■□□□□ 0.59
SNRPD3-201ENST00000215829 RASA1P20936 1047 aa18.74■□□□□ 0.59
SNRPD3-201ENST00000215829 TFAP4Q01664 338 aa18.74■□□□□ 0.59
SNRPD3-201ENST00000215829 SAMD7Q7Z3H4 446 aa18.74■□□□□ 0.59
SNRPD3-201ENST00000215829 SGMS1Q86VZ5 419 aa18.74■□□□□ 0.59
SNRPD3-201ENST00000215829 ZSCAN29Q8IWY8 852 aaPredicted RBP18.74■□□□□ 0.59
SNRPD3-201ENST00000215829 TMTC2Q8N394 836 aa18.74■□□□□ 0.59
SNRPD3-201ENST00000215829 NECAB1Q8N987 351 aa18.74■□□□□ 0.59
SNRPD3-201ENST00000215829 FAM151AQ8WW52 585 aa18.74■□□□□ 0.59
SNRPD3-201ENST00000215829 ZSCAN10Q96SZ4 725 aaPredicted RBP18.74■□□□□ 0.59
SNRPD3-201ENST00000215829 CWC22Q9HCG8 908 aaKnown RBP18.74■□□□□ 0.59
SNRPD3-201ENST00000215829 SWAP70Q9UH65 585 aa18.74■□□□□ 0.59
SNRPD3-201ENST00000215829 TAOK2Q9UL54 1235 aa18.74■□□□□ 0.59
SNRPD3-201ENST00000215829 BRPF3Q9ULD4 1205 aa18.74■□□□□ 0.59
SNRPD3-201ENST00000215829 COL2A1P02458 1487 aaPredicted RBP18.74■□□□□ 0.59
SNRPD3-201ENST00000215829 PFKFB2O60825 505 aa18.73■□□□□ 0.59
SNRPD3-201ENST00000215829 PDIA3P30101 505 aaKnown RBP18.73■□□□□ 0.59
SNRPD3-201ENST00000215829 ST3GAL1Q11201 340 aa18.73■□□□□ 0.59
SNRPD3-201ENST00000215829 STK3Q13188 491 aa18.73■□□□□ 0.59
SNRPD3-201ENST00000215829 WTAPQ15007 396 aa18.73■□□□□ 0.59
SNRPD3-201ENST00000215829 CCDC83Q8IWF9 413 aa18.73■□□□□ 0.59
SNRPD3-201ENST00000215829 VEZTQ9HBM0 779 aa18.73■□□□□ 0.59
SNRPD3-201ENST00000215829 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.73■□□□□ 0.59
SNRPD3-201ENST00000215829 TNKSO95271 1327 aa18.73■□□□□ 0.59
SNRPD3-201ENST00000215829 KLF18A0A0U1RQI7 1052 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms