RNA–Protein interactions for RNA: ENST00000187762.6

TMEM38A-201, Transcript of transmembrane protein 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM38A, Length 2,649 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38A-201ENST00000187762 STX10O60499 249 aa16.88■□□□□ 0.29
TMEM38A-201ENST00000187762 TUBB4BP68371 445 aa16.88■□□□□ 0.29
TMEM38A-201ENST00000187762 MAP2K1Q02750 393 aaPredicted RBP16.88■□□□□ 0.29
TMEM38A-201ENST00000187762 NEDD9Q14511 834 aa16.88■□□□□ 0.29
TMEM38A-201ENST00000187762 ATL3Q6DD88 541 aa16.88■□□□□ 0.29
TMEM38A-201ENST00000187762 TBC1D22AQ8WUA7 517 aa16.88■□□□□ 0.29
TMEM38A-201ENST00000187762 CABS1Q96KC9 395 aa16.88■□□□□ 0.29
TMEM38A-201ENST00000187762 PALLDQ8WX93 1383 aa16.88■□□□□ 0.29
TMEM38A-201ENST00000187762 SLC3A2P08195 630 aaKnown RBP16.88■□□□□ 0.29
TMEM38A-201ENST00000187762 CCT2P78371 535 aaKnown RBP16.88■□□□□ 0.29
TMEM38A-201ENST00000187762 NAA16Q6N069 864 aaPredicted RBP16.88■□□□□ 0.29
TMEM38A-201ENST00000187762 FAXDC2Q96IV6 333 aa16.88■□□□□ 0.29
TMEM38A-201ENST00000187762 DESI2Q9BSY9 194 aa16.88■□□□□ 0.29
TMEM38A-201ENST00000187762 MCM8Q9UJA3 840 aa16.88■□□□□ 0.29
TMEM38A-201ENST00000187762 SPATA31A3Q5VYP0 1347 aa16.88■□□□□ 0.29
TMEM38A-201ENST00000187762 CDHR2Q9BYE9 1310 aa16.88■□□□□ 0.29
TMEM38A-201ENST00000187762 PARP4Q9UKK3 1724 aaKnown RBP16.88■□□□□ 0.29
TMEM38A-201ENST00000187762 DDR1Q08345 913 aa16.87■□□□□ 0.29
TMEM38A-201ENST00000187762 IGSF22Q8N9C0 903 aa16.87■□□□□ 0.29
TMEM38A-201ENST00000187762 CTCFLQ8NI51 663 aaPredicted RBP16.87■□□□□ 0.29
TMEM38A-201ENST00000187762 SMARCC1Q92922 1105 aaPredicted RBP16.87■□□□□ 0.29
TMEM38A-201ENST00000187762 VIPAS39Q9H9C1 493 aa16.87■□□□□ 0.29
TMEM38A-201ENST00000187762 MRPL44Q9H9J2 332 aaKnown RBP16.87■□□□□ 0.29
TMEM38A-201ENST00000187762 CTDNEP1O95476 244 aa16.87■□□□□ 0.29
TMEM38A-201ENST00000187762 NCOA5Q9HCD5 579 aaKnown RBP16.87■□□□□ 0.29
TMEM38A-201ENST00000187762 KIF3CO14782 793 aa16.86■□□□□ 0.29
TMEM38A-201ENST00000187762 DHX32Q7L7V1 743 aaKnown RBP16.86■□□□□ 0.29
TMEM38A-201ENST00000187762 NSUN7Q8NE18 718 aaKnown RBP16.86■□□□□ 0.29
TMEM38A-201ENST00000187762 SMARCC2Q8TAQ2 1214 aa16.86■□□□□ 0.29
TMEM38A-201ENST00000187762 CCDC85AQ96PX6 553 aaPredicted RBP16.86■□□□□ 0.29
TMEM38A-201ENST00000187762 MAST3O60307 1309 aa16.86■□□□□ 0.29
TMEM38A-201ENST00000187762 A0A1W2PQ27 194 aa16.86■□□□□ 0.29
TMEM38A-201ENST00000187762 A0A1W2PQ64 194 aa16.86■□□□□ 0.29
TMEM38A-201ENST00000187762 A0A1W2PQD8 194 aa16.86■□□□□ 0.29
TMEM38A-201ENST00000187762 IFIT1P09914 478 aaKnown RBP16.86■□□□□ 0.29
TMEM38A-201ENST00000187762 HSPD1P10809 573 aaKnown RBP16.86■□□□□ 0.29
TMEM38A-201ENST00000187762 IL15P40933 162 aaPredicted RBP16.86■□□□□ 0.29
TMEM38A-201ENST00000187762 C11orf91Q3C1V1 193 aa16.86■□□□□ 0.29
TMEM38A-201ENST00000187762 ZMYM1Q5SVZ6 1142 aa16.86■□□□□ 0.29
TMEM38A-201ENST00000187762 ADALQ6DHV7 355 aa16.86■□□□□ 0.29
TMEM38A-201ENST00000187762 TOM1L2Q6ZVM7 507 aa16.86■□□□□ 0.29
TMEM38A-201ENST00000187762 ZNF330Q9Y3S2 320 aaPredicted RBP16.86■□□□□ 0.29
TMEM38A-201ENST00000187762 CAPN7Q9Y6W3 813 aa16.86■□□□□ 0.29
TMEM38A-201ENST00000187762 UBR2Q8IWV8 1755 aa16.86■□□□□ 0.29
TMEM38A-201ENST00000187762 EYA2O00167 538 aa16.85■□□□□ 0.29
TMEM38A-201ENST00000187762 PFKFB2O60825 505 aa16.85■□□□□ 0.29
TMEM38A-201ENST00000187762 CALRP27797 417 aaKnown RBP16.85■□□□□ 0.29
TMEM38A-201ENST00000187762 TBX2Q13207 712 aaPredicted RBP16.85■□□□□ 0.29
TMEM38A-201ENST00000187762 PDILTQ8N807 584 aa16.85■□□□□ 0.29
TMEM38A-201ENST00000187762 JMYQ8N9B5 988 aa16.85■□□□□ 0.29
TMEM38A-201ENST00000187762 ZCRB1Q8TBF4 217 aaKnown RBP16.85■□□□□ 0.29
TMEM38A-201ENST00000187762 KAT14Q9H8E8 782 aa16.85■□□□□ 0.29
TMEM38A-201ENST00000187762 HELLSQ9NRZ9 838 aa16.85■□□□□ 0.29
TMEM38A-201ENST00000187762 PTPDC1A2A3K4 754 aa16.85■□□□□ 0.29
TMEM38A-201ENST00000187762 E7EWF7 191 aa16.85■□□□□ 0.29
TMEM38A-201ENST00000187762 M0R2C6 588 aa16.85■□□□□ 0.29
TMEM38A-201ENST00000187762 TUBBP07437 444 aa16.85■□□□□ 0.29
TMEM38A-201ENST00000187762 N4BP2L2Q92802 583 aaPredicted RBP16.85■□□□□ 0.29
TMEM38A-201ENST00000187762 ZKSCAN4Q969J2 545 aaPredicted RBP16.85■□□□□ 0.29
TMEM38A-201ENST00000187762 INTS13Q9NVM9 706 aa16.85■□□□□ 0.29
TMEM38A-201ENST00000187762 RBM28Q9NW13 759 aaKnown RBP16.85■□□□□ 0.29
TMEM38A-201ENST00000187762 KCPQ6ZWJ8 1503 aa16.85■□□□□ 0.29
TMEM38A-201ENST00000187762 IRAK1P51617 712 aa16.84■□□□□ 0.29
TMEM38A-201ENST00000187762 MYL5Q02045 173 aa16.84■□□□□ 0.29
TMEM38A-201ENST00000187762 GUCY1B3Q02153 619 aa16.84■□□□□ 0.29
TMEM38A-201ENST00000187762 TC2NQ8N9U0 490 aa16.84■□□□□ 0.29
TMEM38A-201ENST00000187762 VEZTQ9HBM0 779 aa16.84■□□□□ 0.29
TMEM38A-201ENST00000187762 PCDH11XQ9BZA7 1347 aa16.84■□□□□ 0.29
TMEM38A-201ENST00000187762 PCDH11YQ9BZA8 1340 aa16.84■□□□□ 0.29
TMEM38A-201ENST00000187762 EXOSC10Q01780 885 aaKnown RBP16.84■□□□□ 0.29
TMEM38A-201ENST00000187762 TUBB2AQ13885 445 aa16.84■□□□□ 0.29
TMEM38A-201ENST00000187762 TUBB2BQ9BVA1 445 aa16.84■□□□□ 0.29
TMEM38A-201ENST00000187762 DSCC1Q9BVC3 393 aa16.84■□□□□ 0.29
TMEM38A-201ENST00000187762 CD248Q9HCU0 757 aa16.84■□□□□ 0.29
TMEM38A-201ENST00000187762 CPDO75976 1380 aa16.84■□□□□ 0.29
TMEM38A-201ENST00000187762 MYO1FO00160 1098 aa16.83■□□□□ 0.29
TMEM38A-201ENST00000187762 IRF6O14896 467 aa16.83■□□□□ 0.29
TMEM38A-201ENST00000187762 TFRCP02786 760 aaKnown RBP16.83■□□□□ 0.29
TMEM38A-201ENST00000187762 RDXP35241 583 aaKnown RBP16.83■□□□□ 0.29
TMEM38A-201ENST00000187762 FNTAP49354 379 aa16.83■□□□□ 0.29
TMEM38A-201ENST00000187762 ADKP55263 362 aaKnown RBP16.83■□□□□ 0.29
TMEM38A-201ENST00000187762 BIRC2Q13490 618 aa16.83■□□□□ 0.29
TMEM38A-201ENST00000187762 ILDR1Q86SU0 546 aaPredicted RBP16.83■□□□□ 0.29
TMEM38A-201ENST00000187762 LZTFL1Q9NQ48 299 aa16.83■□□□□ 0.29
TMEM38A-201ENST00000187762 PRDM11Q9NQV5 511 aa16.83■□□□□ 0.29
TMEM38A-201ENST00000187762 NEBLO76041 1014 aa16.83■□□□□ 0.28
TMEM38A-201ENST00000187762 ADORA1P30542 326 aa16.83■□□□□ 0.28
TMEM38A-201ENST00000187762 FKBP4Q02790 459 aaKnown RBP eCLIP16.83■□□□□ 0.28
TMEM38A-201ENST00000187762 CADPS2Q86UW7 1296 aa16.83■□□□□ 0.28
TMEM38A-201ENST00000187762 XAGE2Q96GT9 111 aa16.83■□□□□ 0.28
TMEM38A-201ENST00000187762 GPR108Q9NPR9 543 aa16.83■□□□□ 0.28
TMEM38A-201ENST00000187762 GPHNQ9NQX3 736 aaPredicted RBP16.83■□□□□ 0.28
TMEM38A-201ENST00000187762 FANCLQ9NW38 375 aa16.83■□□□□ 0.28
TMEM38A-201ENST00000187762 HPCAL4Q9UM19 191 aa16.83■□□□□ 0.28
TMEM38A-201ENST00000187762 CTAGE15A4D2H0 777 aa16.83■□□□□ 0.28
TMEM38A-201ENST00000187762 CHUKO15111 745 aa16.83■□□□□ 0.28
TMEM38A-201ENST00000187762 RNF113AO15541 343 aaKnown RBP16.83■□□□□ 0.28
TMEM38A-201ENST00000187762 HMGB1P09429 215 aaKnown RBP16.83■□□□□ 0.28
TMEM38A-201ENST00000187762 CCDC175P0C221 793 aa16.83■□□□□ 0.28
TMEM38A-201ENST00000187762 CTAGE8P0CG41 777 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms