RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 GNPATO15228 680 aa15.14■□□□□ 0.01
CTNS-201ENST00000046640 SART3Q15020 963 aaKnown RBP15.14■□□□□ 0.01
CTNS-201ENST00000046640 UTP14CQ5TAP6 766 aaKnown RBP15.14■□□□□ 0.01
CTNS-201ENST00000046640 SHC4Q6S5L8 630 aa15.14■□□□□ 0.01
CTNS-201ENST00000046640 SMARCC1Q92922 1105 aaPredicted RBP15.14■□□□□ 0.01
CTNS-201ENST00000046640 FAM84BQ96KN1 310 aaPredicted RBP15.14■□□□□ 0.01
CTNS-201ENST00000046640 CNNM2Q9H8M5 875 aa15.14■□□□□ 0.01
CTNS-201ENST00000046640 LIFRP42702 1097 aa15.14■□□□□ 0.01
CTNS-201ENST00000046640 SYKP43405 635 aa15.14■□□□□ 0.01
CTNS-201ENST00000046640 GRIN1Q05586 938 aa15.14■□□□□ 0.01
CTNS-201ENST00000046640 PNOCQ13519 176 aa15.14■□□□□ 0.01
CTNS-201ENST00000046640 NBPF5PQ86XG9 351 aaPredicted RBP15.14■□□□□ 0.01
CTNS-201ENST00000046640 DIS3L2Q8IYB7 885 aaKnown RBP15.14■□□□□ 0.01
CTNS-201ENST00000046640 OXER1Q8TDS5 423 aa15.14■□□□□ 0.01
CTNS-201ENST00000046640 ZNF384Q8TF68 577 aa15.14■□□□□ 0.01
CTNS-201ENST00000046640 STAG1Q8WVM7 1258 aa15.14■□□□□ 0.01
CTNS-201ENST00000046640 GNL3LQ9NVN8 582 aaKnown RBP15.14■□□□□ 0.01
CTNS-201ENST00000046640 HSP90AA4PQ58FG1 418 aa15.13■□□□□ 0.01
CTNS-201ENST00000046640 AATFQ9NY61 560 aaKnown RBP eCLIP15.13■□□□□ 0.01
CTNS-201ENST00000046640 TNKSO95271 1327 aa15.13■□□□□ 0.01
CTNS-201ENST00000046640 GNAT2P19087 354 aa15.13■□□□□ 0.01
CTNS-201ENST00000046640 CMA1P23946 247 aa15.13■□□□□ 0.01
CTNS-201ENST00000046640 ZNF771Q7L3S4 317 aaPredicted RBP15.13■□□□□ 0.01
CTNS-201ENST00000046640 TXNRD3Q86VQ6 643 aa15.13■□□□□ 0.01
CTNS-201ENST00000046640 ZNF654Q8IZM8 581 aa15.13■□□□□ 0.01
CTNS-201ENST00000046640 PAXBP1Q9Y5B6 917 aa15.13■□□□□ 0.01
CTNS-201ENST00000046640 MYH15Q9Y2K3 1946 aa15.12■□□□□ 0.01
CTNS-201ENST00000046640 FOXN1O15353 648 aa15.12■□□□□ 0.01
CTNS-201ENST00000046640 NMT2O60551 498 aa15.12■□□□□ 0.01
CTNS-201ENST00000046640 FMNL1O95466 1100 aaPredicted RBP15.12■□□□□ 0.01
CTNS-201ENST00000046640 PTPAQ15257 358 aa15.12■□□□□ 0.01
CTNS-201ENST00000046640 TMC6Q7Z403 805 aa15.12■□□□□ 0.01
CTNS-201ENST00000046640 TRIM22Q8IYM9 498 aa15.12■□□□□ 0.01
CTNS-201ENST00000046640 KLHL34Q8N239 644 aa15.12■□□□□ 0.01
CTNS-201ENST00000046640 FANCBQ8NB91 859 aa15.12■□□□□ 0.01
CTNS-201ENST00000046640 SETDB2Q96T68 719 aa15.12■□□□□ 0.01
CTNS-201ENST00000046640 BSDC1Q9NW68 430 aaPredicted RBP15.12■□□□□ 0.01
CTNS-201ENST00000046640 PNPLA7Q6ZV29 1317 aa15.12■□□□□ 0.01
CTNS-201ENST00000046640 COL1A1P02452 1464 aaPredicted RBP15.12■□□□□ 0.01
CTNS-201ENST00000046640 LMOD1P29536 600 aaPredicted RBP15.12■□□□□ 0.01
CTNS-201ENST00000046640 PDILTQ8N807 584 aa15.12■□□□□ 0.01
CTNS-201ENST00000046640 MAP3K14Q99558 947 aa15.12■□□□□ 0.01
CTNS-201ENST00000046640 IFNKQ9P0W0 207 aa15.12■□□□□ 0.01
CTNS-201ENST00000046640 EP400Q96L91 3159 aa15.12■□□□□ 0.01
CTNS-201ENST00000046640 FAM205CA6NFA0 338 aa15.11■□□□□ 0.01
CTNS-201ENST00000046640 USP17L12C9JPN9 530 aa15.11■□□□□ 0.01
CTNS-201ENST00000046640 USP17L21D6R901 530 aa15.11■□□□□ 0.01
CTNS-201ENST00000046640 PRDX5P30044 214 aa15.11■□□□□ 0.01
CTNS-201ENST00000046640 RPS8P62241 208 aaKnown RBP15.11■□□□□ 0.01
CTNS-201ENST00000046640 CCZ1BP86790 482 aa15.11■□□□□ 0.01
CTNS-201ENST00000046640 CCZ1P86791 482 aaPredicted RBP15.11■□□□□ 0.01
CTNS-201ENST00000046640 ELF2Q15723 593 aa15.11■□□□□ 0.01
CTNS-201ENST00000046640 FAM47AQ5JRC9 791 aa15.11■□□□□ 0.01
CTNS-201ENST00000046640 BARGINQ6ZT62 677 aa15.11■□□□□ 0.01
CTNS-201ENST00000046640 NAT10Q9H0A0 1025 aaKnown RBP15.11■□□□□ 0.01
CTNS-201ENST00000046640 PLCH1Q4KWH8 1693 aa15.11■□□□□ 0.01
CTNS-201ENST00000046640 ZPR1O75312 459 aa15.11■□□□□ 0.01
CTNS-201ENST00000046640 CAVIN2O95810 425 aa15.11■□□□□ 0.01
CTNS-201ENST00000046640 IFNAR1P17181 557 aa15.11■□□□□ 0.01
CTNS-201ENST00000046640 LONRF3Q496Y0 759 aa15.11■□□□□ 0.01
CTNS-201ENST00000046640 CLEC4GQ6UXB4 293 aa15.11■□□□□ 0.01
CTNS-201ENST00000046640 NOSTRINQ8IVI9 506 aa15.11■□□□□ 0.01
CTNS-201ENST00000046640 MRFAP1L1Q96HT8 127 aa15.11■□□□□ 0.01
CTNS-201ENST00000046640 RIOK1Q9BRS2 568 aaKnown RBP15.11■□□□□ 0.01
CTNS-201ENST00000046640 VPS54Q9P1Q0 977 aa15.11■□□□□ 0.01
CTNS-201ENST00000046640 TOB1P50616 345 aaPredicted RBP15.1■□□□□ 0.01
CTNS-201ENST00000046640 UBE4AQ14139 1066 aa15.1■□□□□ 0.01
CTNS-201ENST00000046640 SAFBQ15424 915 aaKnown RBP eCLIP15.1■□□□□ 0.01
CTNS-201ENST00000046640 CRACR2BQ8N4Y2 399 aaPredicted RBP15.1■□□□□ 0.01
CTNS-201ENST00000046640 NLRP3Q96P20 1036 aa15.1■□□□□ 0.01
CTNS-201ENST00000046640 GPR101Q96P66 508 aaPredicted RBP15.1■□□□□ 0.01
CTNS-201ENST00000046640 XPO4Q9C0E2 1151 aaKnown RBP15.1■□□□□ 0.01
CTNS-201ENST00000046640 CABP5Q9NP86 173 aa15.1■□□□□ 0.01
CTNS-201ENST00000046640 PCDHB6Q9Y5E3 794 aa15.1■□□□□ 0.01
CTNS-201ENST00000046640 BAZ2BQ9UIF8 2168 aaKnown RBP15.1■□□□□ 0.01
CTNS-201ENST00000046640 CYP2D6P10635 497 aa15.1■□□□□ 0.01
CTNS-201ENST00000046640 SF3B3Q15393 1217 aaKnown RBP15.1■□□□□ 0.01
CTNS-201ENST00000046640 ESR2Q92731 530 aa15.1■□□□□ 0.01
CTNS-201ENST00000046640 MTMR7Q9Y216 660 aa15.1■□□□□ 0.01
CTNS-201ENST00000046640 C4AP0C0L4 1744 aa15.1■□□□□ 0.01
CTNS-201ENST00000046640 C4BP0C0L5 1744 aa15.1■□□□□ 0.01
CTNS-201ENST00000046640 MMP1P03956 469 aa15.1■□□□□ 0.01
CTNS-201ENST00000046640 MECOMQ03112 1051 aa15.1■□□□□ 0.01
CTNS-201ENST00000046640 GOLGA8FQ08AF8 430 aa15.1■□□□□ 0.01
CTNS-201ENST00000046640 GOLGA8DPQ0D2H9 430 aa15.1■□□□□ 0.01
CTNS-201ENST00000046640 ENAHQ8N8S7 591 aaPredicted RBP15.1■□□□□ 0.01
CTNS-201ENST00000046640 RNF41Q9H4P4 317 aaPredicted RBP15.1■□□□□ 0.01
CTNS-201ENST00000046640 DDX60Q8IY21 1712 aaKnown RBP15.09■□□□□ 0.01
CTNS-201ENST00000046640 ZNF804BA4D1E1 1349 aa15.09■□□□□ 0.01
CTNS-201ENST00000046640 PLEKHA8P1O95397 391 aa15.09■□□□□ 0.01
CTNS-201ENST00000046640 ATP1A3P13637 1013 aa15.09■□□□□ 0.01
CTNS-201ENST00000046640 CDC25BP30305 580 aa15.09■□□□□ 0.01
CTNS-201ENST00000046640 SARM1Q6SZW1 724 aa15.09■□□□□ 0.01
CTNS-201ENST00000046640 NBPF11Q86T75 865 aa15.09■□□□□ 0.01
CTNS-201ENST00000046640 GRAMD1CQ8IYS0 662 aa15.09■□□□□ 0.01
CTNS-201ENST00000046640 CCAR2Q8N163 923 aaKnown RBP15.09■□□□□ 0.01
CTNS-201ENST00000046640 V9GY48 417 aaPredicted RBP15.09■□□□□ 0.01
CTNS-201ENST00000046640 LRP5O75197 1615 aa15.09■□□□□ 0.01
CTNS-201ENST00000046640 KMT5BQ4FZB7 885 aa15.09■□□□□ 0.01
CTNS-201ENST00000046640 JMYQ8N9B5 988 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms