RNA–Protein interactions for RNA: ENSMUST00000222968.1

Cpsf3-211, Transcript of Cleavage and polyadenylation specificity factor subunit 3, mousemouse

TSL 1 (best) BASIC

Gene Cpsf3, Length 1,858 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3-211ENSMUST00000222968 Vnn1Q9Z0K8 512 aa11.72□□□□□ -0.53
Cpsf3-211ENSMUST00000222968 Grin2dQ03391 1323 aa11.71□□□□□ -0.53
Cpsf3-211ENSMUST00000222968 Gm7347D3YYI9 267 aa11.71□□□□□ -0.53
Cpsf3-211ENSMUST00000222968 Speer4aF8VPX6 267 aa11.71□□□□□ -0.53
Cpsf3-211ENSMUST00000222968 Dapk3O54784 448 aa11.71□□□□□ -0.53
Cpsf3-211ENSMUST00000222968 Fam83bQ0VBM2 1012 aa11.71□□□□□ -0.53
Cpsf3-211ENSMUST00000222968 Kif1bpQ6ZPU9 617 aa11.71□□□□□ -0.53
Cpsf3-211ENSMUST00000222968 Slu7Q8BHJ9 585 aa11.71□□□□□ -0.53
Cpsf3-211ENSMUST00000222968 QarsQ8BML9 775 aa11.71□□□□□ -0.53
Cpsf3-211ENSMUST00000222968 Q8BT18 775 aa11.71□□□□□ -0.53
Cpsf3-211ENSMUST00000222968 Kiaa1524Q8BWY9 907 aa11.71□□□□□ -0.53
Cpsf3-211ENSMUST00000222968 Tmem87aQ8BXN9 555 aa11.71□□□□□ -0.53
Cpsf3-211ENSMUST00000222968 Rec8Q8C5S7 591 aa11.71□□□□□ -0.53
Cpsf3-211ENSMUST00000222968 MbipQ99LQ1 341 aa11.71□□□□□ -0.53
Cpsf3-211ENSMUST00000222968 Trim11Q99PQ2 467 aa11.71□□□□□ -0.53
Cpsf3-211ENSMUST00000222968 Ankrd1Q9CR42 319 aa11.71□□□□□ -0.53
Cpsf3-211ENSMUST00000222968 Zcrb1Q9CZ96 217 aaKnown RBP11.71□□□□□ -0.53
Cpsf3-211ENSMUST00000222968 Cep89Q9CZX2 791 aa11.71□□□□□ -0.53
Cpsf3-211ENSMUST00000222968 Tob2Q9JM55 345 aa11.71□□□□□ -0.53
Cpsf3-211ENSMUST00000222968 Letm1Q9Z2I0 738 aa11.71□□□□□ -0.53
Cpsf3-211ENSMUST00000222968 Bin1O08539 588 aaKnown RBP11.7□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Cyp3a25O09158 503 aa11.7□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Grin1P35438 938 aa11.7□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Ehmt1Q5DW34 1296 aa11.7□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Lrrc8aQ80WG5 810 aa11.7□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Dctpp1Q9QY93 170 aa11.7□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Kcnh3Q9WVJ0 1095 aa11.7□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Gm973E9Q295 1059 aa11.7□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Zscan29E9Q5B4 869 aa11.7□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 SfswapQ3USH5 945 aaKnown RBP11.7□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Usp13Q5BKP2 858 aa11.7□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Ube2oQ6ZPJ3 1288 aa11.7□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Olfr119Q7TRJ5 321 aa11.7□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Ttll4Q80UG8 1193 aa11.7□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Adck5Q80V03 582 aa11.7□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Arid5bQ8BM75 1188 aaKnown RBP11.7□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Taok3Q8BYC6 898 aa11.7□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Ccdc150Q8CDI7 1110 aa11.7□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Amhr2Q8K592 568 aa11.7□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Prpf3Q922U1 683 aaKnown RBP11.7□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Prr16A3KMN5 304 aa11.69□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Zscan20B2KFW1 1030 aa11.69□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Abl1P00520 1123 aa11.69□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Gas2l3Q3UWW6 683 aa11.69□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Cyp4x1Q6A152 507 aa11.69□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Atxn2lQ7TQH0 1049 aaKnown RBP11.69□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Dnaaf4Q8R368 420 aa11.69□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Grpel1Q99LP6 217 aa11.69□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Xpo4Q9ESJ0 1151 aa11.69□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Hic2Q9JLZ6 619 aaKnown RBP11.69□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Epb41l3Q9WV92 929 aa11.69□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Pet2A2AHY8 747 aa11.68□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Calm1P0DP26 149 aaKnown RBP11.68□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Calm2P0DP27 149 aaKnown RBP11.68□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Calm3P0DP28 149 aaKnown RBP11.68□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 RdxP26043 583 aaKnown RBP11.68□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Myo1bP46735 1107 aa11.68□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Slc7a1Q09143 622 aa11.68□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Mum1l1Q4VA55 681 aa11.68□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Cdcp1Q5U462 833 aa11.68□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Prpf4bQ61136 1007 aaKnown RBP11.68□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Clec16aQ80U30 1036 aa11.68□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Slc14a2Q8R4T9 930 aa11.68□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Ubac1Q8VDI7 409 aa11.68□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Ccdc39Q9D5Y1 937 aa11.68□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Pik3ap1Q9EQ32 811 aa11.68□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Tfcp2Q9ERA0 502 aa11.68□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Slfn1Q9Z0I7 337 aa11.68□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Igsf9bE9PZ19 1328 aa11.68□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Sh3tc1G3X9F6 1346 aa11.68□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Gm45140A0A0N4SUM8 220 aa11.68□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Gm10134F6ZQC6 126 aa11.68□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Tpd52l1O54818 204 aa11.68□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Nbr1P97432 988 aa11.68□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Tmtc2Q56A06 836 aa11.68□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Rbm10Q99KG3 930 aaKnown RBP11.68□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 NsmfQ99NF2 532 aa11.68□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Dydc2Q9D3X8 139 aa11.68□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Nek3Q9R0A5 511 aa11.68□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Myh7bA2AQP0 1941 aa11.67□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Ktn1Q61595 1327 aaKnown RBP11.67□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 A0A1Y7VML8 143 aa11.67□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Acad12D3Z7X0 555 aa11.67□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Nmt2O70311 529 aa11.67□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 TbcaP48428 108 aaKnown RBP11.67□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Kcnd1Q03719 651 aa11.67□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Tmed8Q3UHI4 326 aa11.67□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Plekha7Q3UIL6 1118 aaKnown RBP11.67□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Ccdc51Q3URS9 406 aa11.67□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 RadxQ8C779 850 aa11.67□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Rbm42Q91V81 474 aaKnown RBP11.67□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Krt23Q99PS0 422 aa11.67□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Mrps25Q9D125 171 aaKnown RBP11.67□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Irx4Q9QY61 515 aa11.67□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Col20a1Q923P0 1320 aa11.67□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Col11a2Q64739 1736 aa11.67□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Phldb3E9QAF4 648 aa11.66□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Tlr8P58682 1032 aa11.66□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Anks1aP59672 1150 aa11.66□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 NfixP70257 488 aa11.66□□□□□ -0.54
Retrieved 100 of 22,080 RNA–protein pairs in 13.8 ms