RNA–Protein interactions for RNA: ENSMUST00000219577.1

Herc4-208, Transcript of Probable E3 ubiquitin-protein ligase HERC4, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Herc4, Length 3,914 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4-208ENSMUST00000219577 Atp1a2Q6PIE5 1020 aa13.78□□□□□ -0.2
Herc4-208ENSMUST00000219577 Vps37dQ810I0 261 aa13.78□□□□□ -0.2
Herc4-208ENSMUST00000219577 AbraQ8BUZ1 375 aa13.78□□□□□ -0.2
Herc4-208ENSMUST00000219577 Foxo4Q9WVH3 505 aa13.78□□□□□ -0.2
Herc4-208ENSMUST00000219577 Col4a1P02463 1669 aa13.78□□□□□ -0.2
Herc4-208ENSMUST00000219577 Nfil3O08750 462 aa13.78□□□□□ -0.2
Herc4-208ENSMUST00000219577 Gjb4Q02738 266 aa13.78□□□□□ -0.2
Herc4-208ENSMUST00000219577 Slc38a10Q5I012 1090 aa13.78□□□□□ -0.2
Herc4-208ENSMUST00000219577 Txndc16Q7TN22 820 aa13.78□□□□□ -0.2
Herc4-208ENSMUST00000219577 Tns2Q8CGB6 1400 aa13.78□□□□□ -0.2
Herc4-208ENSMUST00000219577 PparaP23204 468 aa13.78□□□□□ -0.2
Herc4-208ENSMUST00000219577 Srp68Q8BMA6 625 aaKnown RBP13.78□□□□□ -0.2
Herc4-208ENSMUST00000219577 Stn1Q8K2X3 378 aa13.78□□□□□ -0.2
Herc4-208ENSMUST00000219577 Carmil3Q3UFQ8 1375 aa13.77□□□□□ -0.2
Herc4-208ENSMUST00000219577 Med23Q80YQ2 1367 aa13.77□□□□□ -0.2
Herc4-208ENSMUST00000219577 Qtrt2B8ZXI1 415 aa13.77□□□□□ -0.2
Herc4-208ENSMUST00000219577 Il7P10168 154 aa13.77□□□□□ -0.2
Herc4-208ENSMUST00000219577 Spata5Q3UMC0 893 aaKnown RBP13.77□□□□□ -0.2
Herc4-208ENSMUST00000219577 Ccng2O08918 344 aa13.77□□□□□ -0.21
Herc4-208ENSMUST00000219577 Abcd1P48410 736 aa13.77□□□□□ -0.21
Herc4-208ENSMUST00000219577 Dpf2Q61103 391 aaKnown RBP13.77□□□□□ -0.21
Herc4-208ENSMUST00000219577 Arpp21Q9DCB4 807 aa13.77□□□□□ -0.21
Herc4-208ENSMUST00000219577 Scn7aB1AYL1 1681 aa13.77□□□□□ -0.21
Herc4-208ENSMUST00000219577 Arap3Q8R5G7 1538 aa13.77□□□□□ -0.21
Herc4-208ENSMUST00000219577 Gm7347D3YYI9 267 aa13.77□□□□□ -0.21
Herc4-208ENSMUST00000219577 Arid4aF8VPQ2 1261 aaKnown RBP13.77□□□□□ -0.21
Herc4-208ENSMUST00000219577 Speer4aF8VPX6 267 aa13.77□□□□□ -0.21
Herc4-208ENSMUST00000219577 Eif6O55135 245 aa13.76□□□□□ -0.21
Herc4-208ENSMUST00000219577 Gimap8Q75N62 688 aa13.76□□□□□ -0.21
Herc4-208ENSMUST00000219577 IqcgQ80W32 419 aa13.76□□□□□ -0.21
Herc4-208ENSMUST00000219577 Rasgrp4Q8BTM9 673 aa13.76□□□□□ -0.21
Herc4-208ENSMUST00000219577 Ankk1Q8BZ25 745 aa13.76□□□□□ -0.21
Herc4-208ENSMUST00000219577 Lrrd1Q8C0R9 853 aa13.76□□□□□ -0.21
Herc4-208ENSMUST00000219577 BaatQ91X34 420 aa13.76□□□□□ -0.21
Herc4-208ENSMUST00000219577 Palm3A2TJV2 734 aa13.76□□□□□ -0.21
Herc4-208ENSMUST00000219577 Foxp1P58462 705 aa13.76□□□□□ -0.21
Herc4-208ENSMUST00000219577 Usp13Q5BKP2 858 aa13.76□□□□□ -0.21
Herc4-208ENSMUST00000219577 Cyp7b1Q60991 507 aa13.76□□□□□ -0.21
Herc4-208ENSMUST00000219577 Prkag3Q8BGM7 489 aa13.76□□□□□ -0.21
Herc4-208ENSMUST00000219577 Dync1i1O88485 628 aa13.76□□□□□ -0.21
Herc4-208ENSMUST00000219577 MarcksP26645 309 aaKnown RBP13.76□□□□□ -0.21
Herc4-208ENSMUST00000219577 Cbx6Q9DBY5 414 aa13.76□□□□□ -0.21
Herc4-208ENSMUST00000219577 Kcnq5Q9JK45 933 aa13.76□□□□□ -0.21
Herc4-208ENSMUST00000219577 Cyp26c1B2RXA7 518 aa13.75□□□□□ -0.21
Herc4-208ENSMUST00000219577 Cd3dP04235 173 aa13.75□□□□□ -0.21
Herc4-208ENSMUST00000219577 Pla2g4bP0C871 782 aa13.75□□□□□ -0.21
Herc4-208ENSMUST00000219577 Rad23bP54728 416 aa13.75□□□□□ -0.21
Herc4-208ENSMUST00000219577 Anks1aP59672 1150 aa13.75□□□□□ -0.21
Herc4-208ENSMUST00000219577 Abcf1Q6P542 837 aaKnown RBP13.75□□□□□ -0.21
Herc4-208ENSMUST00000219577 Alx1Q8C8B0 326 aa13.75□□□□□ -0.21
Herc4-208ENSMUST00000219577 Fam76aQ922G2 307 aa13.75□□□□□ -0.21
Herc4-208ENSMUST00000219577 Dynll2Q9D0M5 89 aa13.75□□□□□ -0.21
Herc4-208ENSMUST00000219577 Slurp2P0DP59 97 aa13.75□□□□□ -0.21
Herc4-208ENSMUST00000219577 GabrdP22933 449 aa13.75□□□□□ -0.21
Herc4-208ENSMUST00000219577 Cnga2Q62398 664 aa13.75□□□□□ -0.21
Herc4-208ENSMUST00000219577 Hps6Q8BLY7 805 aa13.75□□□□□ -0.21
Herc4-208ENSMUST00000219577 Caps2Q8BUG5 550 aa13.75□□□□□ -0.21
Herc4-208ENSMUST00000219577 Nek9Q8K1R7 984 aa13.75□□□□□ -0.21
Herc4-208ENSMUST00000219577 Stat5bP42232 786 aa13.75□□□□□ -0.21
Herc4-208ENSMUST00000219577 Ift88Q61371 824 aa13.75□□□□□ -0.21
Herc4-208ENSMUST00000219577 Mis18aQ9CZJ6 204 aa13.75□□□□□ -0.21
Herc4-208ENSMUST00000219577 AmfrQ9R049 643 aa13.75□□□□□ -0.21
Herc4-208ENSMUST00000219577 Gja10Q9WUS4 505 aa13.75□□□□□ -0.21
Herc4-208ENSMUST00000219577 Foxo3Q9WVH4 672 aa13.75□□□□□ -0.21
Herc4-208ENSMUST00000219577 Apol7aB2RT54 418 aa13.74□□□□□ -0.21
Herc4-208ENSMUST00000219577 Fam89aQ14BJ1 175 aa13.74□□□□□ -0.21
Herc4-208ENSMUST00000219577 Eme2Q56A04 373 aa13.74□□□□□ -0.21
Herc4-208ENSMUST00000219577 Pdcd6ipQ9WU78 869 aaKnown RBP13.74□□□□□ -0.21
Herc4-208ENSMUST00000219577 Calcoco2A2A6M5 331 aa13.74□□□□□ -0.21
Herc4-208ENSMUST00000219577 SsbP32067 415 aaKnown RBP13.74□□□□□ -0.21
Herc4-208ENSMUST00000219577 Cep85Q8BMK0 761 aa13.74□□□□□ -0.21
Herc4-208ENSMUST00000219577 Sgsm1Q8BPQ7 1093 aa13.74□□□□□ -0.21
Herc4-208ENSMUST00000219577 Pus7lQ8CE46 702 aa13.74□□□□□ -0.21
Herc4-208ENSMUST00000219577 Galntl5Q9D4M9 431 aa13.74□□□□□ -0.21
Herc4-208ENSMUST00000219577 Lmbr1Q9JIT0 490 aa13.74□□□□□ -0.21
Herc4-208ENSMUST00000219577 Otud7bB2RUR8 840 aa13.74□□□□□ -0.21
Herc4-208ENSMUST00000219577 PpardP35396 440 aa13.74□□□□□ -0.21
Herc4-208ENSMUST00000219577 Atp1b3P97370 278 aa13.74□□□□□ -0.21
Herc4-208ENSMUST00000219577 Ankrd23Q812A3 306 aa13.74□□□□□ -0.21
Herc4-208ENSMUST00000219577 Etf1Q8BWY3 437 aaKnown RBP13.74□□□□□ -0.21
Herc4-208ENSMUST00000219577 Zc3h6Q8BYK8 1177 aa13.74□□□□□ -0.21
Herc4-208ENSMUST00000219577 Ubn2Q80WC1 1314 aa13.73□□□□□ -0.21
Herc4-208ENSMUST00000219577 Znhit6Q3UFB2 460 aaKnown RBP13.73□□□□□ -0.21
Herc4-208ENSMUST00000219577 Tango6Q8C3S2 1079 aa13.73□□□□□ -0.21
Herc4-208ENSMUST00000219577 Pde5aQ8CG03 865 aa13.73□□□□□ -0.21
Herc4-208ENSMUST00000219577 Sde2Q8K1J5 448 aaKnown RBP13.73□□□□□ -0.21
Herc4-208ENSMUST00000219577 Apobec3Q99J72 440 aaKnown RBP13.73□□□□□ -0.21
Herc4-208ENSMUST00000219577 Ppil4Q9CXG3 492 aaKnown RBP13.73□□□□□ -0.21
Herc4-208ENSMUST00000219577 Telo2Q9DC40 840 aaKnown RBP13.73□□□□□ -0.21
Herc4-208ENSMUST00000219577 Gm3409A0A0G2JE67 319 aa13.73□□□□□ -0.21
Herc4-208ENSMUST00000219577 Naaladl2A0A0N4SUJ3 795 aa13.73□□□□□ -0.21
Herc4-208ENSMUST00000219577 Panx2Q6IMP4 677 aa13.73□□□□□ -0.21
Herc4-208ENSMUST00000219577 Mxd3Q80US8 206 aa13.73□□□□□ -0.21
Herc4-208ENSMUST00000219577 Ppp2r2cQ8BG02 447 aa13.73□□□□□ -0.21
Herc4-208ENSMUST00000219577 Sugp2Q8CH09 1067 aa13.73□□□□□ -0.21
Herc4-208ENSMUST00000219577 Uba5Q8VE47 403 aa13.73□□□□□ -0.21
Herc4-208ENSMUST00000219577 Gcom1E9PZ54 550 aa13.73□□□□□ -0.21
Herc4-208ENSMUST00000219577 Surf1P09925 306 aa13.73□□□□□ -0.21
Herc4-208ENSMUST00000219577 LtbrP50284 415 aa13.73□□□□□ -0.21
Herc4-208ENSMUST00000219577 Nom1Q3UFM5 854 aaKnown RBP13.73□□□□□ -0.21
Retrieved 100 of 22,080 RNA–protein pairs in 38 ms