RNA–Protein interactions for RNA: ENSMUST00000215817.1

Upf1-202, Transcript of Regulator of nonsense transcripts 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Upf1, Length 4,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1-202ENSMUST00000215817 Ubr1O70481 1757 aa17.52■□□□□ 0.4
Upf1-202ENSMUST00000215817 Ift122Q6NWV3 1182 aa17.52■□□□□ 0.4
Upf1-202ENSMUST00000215817 Senp6Q6P7W0 1132 aa17.52■□□□□ 0.4
Upf1-202ENSMUST00000215817 Cep120Q7TSG1 988 aa17.52■□□□□ 0.4
Upf1-202ENSMUST00000215817 Ltbp4Q8K4G1 1666 aa17.52■□□□□ 0.4
Upf1-202ENSMUST00000215817 Nlrp2Q4PLS0 1046 aaKnown RBP17.52■□□□□ 0.39
Upf1-202ENSMUST00000215817 Cacna2d4Q5RJF7 1116 aa17.52■□□□□ 0.39
Upf1-202ENSMUST00000215817 Nme8Q715T0 586 aa17.52■□□□□ 0.39
Upf1-202ENSMUST00000215817 Srgap1Q91Z69 1062 aa17.52■□□□□ 0.39
Upf1-202ENSMUST00000215817 Med4Q9CQA5 270 aa17.52■□□□□ 0.39
Upf1-202ENSMUST00000215817 Tmod4Q9JLH8 345 aa17.52■□□□□ 0.39
Upf1-202ENSMUST00000215817 Usp42B2RQC2 1324 aaKnown RBP17.52■□□□□ 0.39
Upf1-202ENSMUST00000215817 Cd3dP04235 173 aa17.51■□□□□ 0.39
Upf1-202ENSMUST00000215817 Cbx1P83917 185 aaKnown RBP17.51■□□□□ 0.39
Upf1-202ENSMUST00000215817 Nat10Q8K224 1024 aaKnown RBP17.51■□□□□ 0.39
Upf1-202ENSMUST00000215817 Ccdc173A0JLY1 547 aa17.51■□□□□ 0.39
Upf1-202ENSMUST00000215817 Stim1P70302 685 aa17.51■□□□□ 0.39
Upf1-202ENSMUST00000215817 Riox2Q8CD15 465 aa17.51■□□□□ 0.39
Upf1-202ENSMUST00000215817 Plcd3Q8K2J0 785 aa17.51■□□□□ 0.39
Upf1-202ENSMUST00000215817 Hs6st3Q9QYK4 470 aa17.51■□□□□ 0.39
Upf1-202ENSMUST00000215817 Nup153E9Q3G8 1462 aaKnown RBP17.51■□□□□ 0.39
Upf1-202ENSMUST00000215817 Tgfb2P27090 414 aa17.51■□□□□ 0.39
Upf1-202ENSMUST00000215817 Krt23Q99PS0 422 aa17.51■□□□□ 0.39
Upf1-202ENSMUST00000215817 Anp32eP97822 260 aaKnown RBP17.51■□□□□ 0.39
Upf1-202ENSMUST00000215817 AcrbpQ3V140 540 aa17.51■□□□□ 0.39
Upf1-202ENSMUST00000215817 Gm2163Q6PCY5 473 aa17.51■□□□□ 0.39
Upf1-202ENSMUST00000215817 D830030K20RikE9PYQ5 218 aa17.5■□□□□ 0.39
Upf1-202ENSMUST00000215817 Gm3043K7N693 218 aa17.5■□□□□ 0.39
Upf1-202ENSMUST00000215817 Gm16440K7N6G6 218 aa17.5■□□□□ 0.39
Upf1-202ENSMUST00000215817 Gm2244L7N2A3 218 aa17.5■□□□□ 0.39
Upf1-202ENSMUST00000215817 Gm3278L7N2D2 218 aa17.5■□□□□ 0.39
Upf1-202ENSMUST00000215817 Gm8271L7N2E2 218 aa17.5■□□□□ 0.39
Upf1-202ENSMUST00000215817 FanccP50652 591 aa17.5■□□□□ 0.39
Upf1-202ENSMUST00000215817 Tfcp2l1Q3UNW5 479 aa17.5■□□□□ 0.39
Upf1-202ENSMUST00000215817 Lrrc36Q3V0M2 755 aa17.5■□□□□ 0.39
Upf1-202ENSMUST00000215817 Otop3Q80UF9 577 aa17.5■□□□□ 0.39
Upf1-202ENSMUST00000215817 A0A0U1RNP2 1173 aa17.5■□□□□ 0.39
Upf1-202ENSMUST00000215817 Armc2Q3URY6 854 aa17.5■□□□□ 0.39
Upf1-202ENSMUST00000215817 Sycp1Q62209 993 aa17.5■□□□□ 0.39
Upf1-202ENSMUST00000215817 Atad2Q8CDM1 1040 aa17.5■□□□□ 0.39
Upf1-202ENSMUST00000215817 Paf1Q8K2T8 535 aa17.5■□□□□ 0.39
Upf1-202ENSMUST00000215817 AdpgkQ8VDL4 496 aa17.5■□□□□ 0.39
Upf1-202ENSMUST00000215817 Nxf1Q99JX7 618 aaKnown RBP17.5■□□□□ 0.39
Upf1-202ENSMUST00000215817 SelenooQ9DBC0 667 aa17.5■□□□□ 0.39
Upf1-202ENSMUST00000215817 Atp8b3Q6UQ17 1335 aa17.5■□□□□ 0.39
Upf1-202ENSMUST00000215817 Nedd4P46935 887 aaKnown RBP17.5■□□□□ 0.39
Upf1-202ENSMUST00000215817 Ifit1Q64282 463 aa17.5■□□□□ 0.39
Upf1-202ENSMUST00000215817 Lman1lQ8VCD3 505 aa17.5■□□□□ 0.39
Upf1-202ENSMUST00000215817 Ipo7Q9EPL8 1038 aaKnown RBP17.5■□□□□ 0.39
Upf1-202ENSMUST00000215817 Gli3Q61602 1583 aa17.49■□□□□ 0.39
Upf1-202ENSMUST00000215817 Carmil3Q3UFQ8 1375 aa17.49■□□□□ 0.39
Upf1-202ENSMUST00000215817 Matr3Q8K310 846 aaKnown RBP17.49■□□□□ 0.39
Upf1-202ENSMUST00000215817 Arpp21Q9DCB4 807 aa17.49■□□□□ 0.39
Upf1-202ENSMUST00000215817 Flot1O08917 428 aa17.49■□□□□ 0.39
Upf1-202ENSMUST00000215817 Ubash3aQ3V3E1 624 aa17.49■□□□□ 0.39
Upf1-202ENSMUST00000215817 Sestd1Q80UK0 696 aa17.49■□□□□ 0.39
Upf1-202ENSMUST00000215817 Tns2Q8CGB6 1400 aa17.49■□□□□ 0.39
Upf1-202ENSMUST00000215817 Hdgfl1Q2VPR5 283 aa17.49■□□□□ 0.39
Upf1-202ENSMUST00000215817 Erich4Q3UNU4 136 aa17.49■□□□□ 0.39
Upf1-202ENSMUST00000215817 Tmtc2Q56A06 836 aa17.49■□□□□ 0.39
Upf1-202ENSMUST00000215817 Lamc2Q61092 1191 aa17.49■□□□□ 0.39
Upf1-202ENSMUST00000215817 Slc44a4Q91VA1 707 aa17.49■□□□□ 0.39
Upf1-202ENSMUST00000215817 AdnpQ9Z103 1108 aaKnown RBP17.49■□□□□ 0.39
Upf1-202ENSMUST00000215817 Tpm3P21107 285 aaKnown RBP17.48■□□□□ 0.39
Upf1-202ENSMUST00000215817 Kctd1Q5M956 257 aa17.48■□□□□ 0.39
Upf1-202ENSMUST00000215817 Stac3Q8BZ71 360 aa17.48■□□□□ 0.39
Upf1-202ENSMUST00000215817 Ivns1abpQ920Q8 642 aa17.48■□□□□ 0.39
Upf1-202ENSMUST00000215817 A0A1W2P6Q8 802 aa17.48■□□□□ 0.39
Upf1-202ENSMUST00000215817 Gm9048A0A1W2P7H4 802 aa17.48■□□□□ 0.39
Upf1-202ENSMUST00000215817 A0A1W2P7Z8 802 aa17.48■□□□□ 0.39
Upf1-202ENSMUST00000215817 Gm9046A0A1W2P855 802 aa17.48■□□□□ 0.39
Upf1-202ENSMUST00000215817 Bola3Q8CEI1 110 aa17.48■□□□□ 0.39
Upf1-202ENSMUST00000215817 Mettl5Q8K1A0 209 aa17.48■□□□□ 0.39
Upf1-202ENSMUST00000215817 Ppil4Q9CXG3 492 aaKnown RBP17.48■□□□□ 0.39
Upf1-202ENSMUST00000215817 Glra4Q61603 456 aa17.48■□□□□ 0.39
Upf1-202ENSMUST00000215817 Kif1bpQ6ZPU9 617 aa17.48■□□□□ 0.39
Upf1-202ENSMUST00000215817 Defb15Q8R2I5 79 aa17.48■□□□□ 0.39
Upf1-202ENSMUST00000215817 Qrich1Q3UA37 777 aa17.48■□□□□ 0.39
Upf1-202ENSMUST00000215817 Kbtbd13Q8C828 458 aa17.48■□□□□ 0.39
Upf1-202ENSMUST00000215817 Mtmr3Q8K296 1196 aa17.48■□□□□ 0.39
Upf1-202ENSMUST00000215817 Cdk8Q8R3L8 464 aa17.48■□□□□ 0.39
Upf1-202ENSMUST00000215817 Zhx1P70121 873 aa17.47■□□□□ 0.39
Upf1-202ENSMUST00000215817 Gpr150Q8BL07 427 aa17.47■□□□□ 0.39
Upf1-202ENSMUST00000215817 Mei1Q9D4I2 1268 aa17.47■□□□□ 0.39
Upf1-202ENSMUST00000215817 Psmd14O35593 310 aa17.47■□□□□ 0.39
Upf1-202ENSMUST00000215817 Dapk3O54784 448 aa17.47■□□□□ 0.39
Upf1-202ENSMUST00000215817 Trappc12Q8K2L8 797 aa17.47■□□□□ 0.39
Upf1-202ENSMUST00000215817 Hmgn5Q9JL35 406 aa17.47■□□□□ 0.39
Upf1-202ENSMUST00000215817 Mdc1Q5PSV9 1707 aa17.47■□□□□ 0.39
Upf1-202ENSMUST00000215817 Cpb1B2RS76 415 aa17.47■□□□□ 0.39
Upf1-202ENSMUST00000215817 Traf1P39428 409 aa17.47■□□□□ 0.39
Upf1-202ENSMUST00000215817 Eef2P58252 858 aaKnown RBP17.47■□□□□ 0.39
Upf1-202ENSMUST00000215817 Map10Q8BJS7 891 aa17.47■□□□□ 0.39
Upf1-202ENSMUST00000215817 Bloc1s4Q8VED2 215 aa17.46■□□□□ 0.39
Upf1-202ENSMUST00000215817 Olfml1Q8BSH2 233 aa17.46■□□□□ 0.39
Upf1-202ENSMUST00000215817 Igbp1bQ9QZ29 343 aa17.46■□□□□ 0.39
Upf1-202ENSMUST00000215817 Gadd45bP22339 160 aa17.46■□□□□ 0.39
Upf1-202ENSMUST00000215817 Sptlc2P97363 560 aaKnown RBP17.46■□□□□ 0.39
Upf1-202ENSMUST00000215817 PcQ05920 1178 aa17.46■□□□□ 0.39
Upf1-202ENSMUST00000215817 N4bp2F8VQG7 1678 aaKnown RBP17.46■□□□□ 0.39
Retrieved 100 of 22,080 RNA–protein pairs in 26.7 ms