RNA–Protein interactions for RNA: ENSMUST00000173369.1

Trim39-205, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

TSL 1 (best) BASIC

Gene Trim39, Length 2,914 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-205ENSMUST00000173369 Cbx2P30658 519 aa9.89□□□□□ -0.83
Trim39-205ENSMUST00000173369 Ncf1Q09014 390 aa9.89□□□□□ -0.83
Trim39-205ENSMUST00000173369 OsbpQ3B7Z2 805 aa9.89□□□□□ -0.83
Trim39-205ENSMUST00000173369 Gxylt1Q3UHH8 404 aa9.89□□□□□ -0.83
Trim39-205ENSMUST00000173369 Tigd5Q499M4 642 aa9.89□□□□□ -0.83
Trim39-205ENSMUST00000173369 Mapk4Q6P5G0 583 aa9.89□□□□□ -0.83
Trim39-205ENSMUST00000173369 Epc2Q8C0I4 808 aa9.89□□□□□ -0.83
Trim39-205ENSMUST00000173369 Ndufv1Q91YT0 464 aa9.89□□□□□ -0.83
Trim39-205ENSMUST00000173369 Znf638Q61464 1960 aaKnown RBP9.88□□□□□ -0.83
Trim39-205ENSMUST00000173369 HibadhQ99L13 335 aaKnown RBP9.88□□□□□ -0.83
Trim39-205ENSMUST00000173369 Nfe2l3Q9WTM4 660 aa9.88□□□□□ -0.83
Trim39-205ENSMUST00000173369 Adamts19P59509 1210 aa9.88□□□□□ -0.83
Trim39-205ENSMUST00000173369 Ppp4cP97470 307 aa9.88□□□□□ -0.83
Trim39-205ENSMUST00000173369 Esyt2Q3TZZ7 845 aa9.88□□□□□ -0.83
Trim39-205ENSMUST00000173369 Cnot6lQ8VEG6 555 aa9.88□□□□□ -0.83
Trim39-205ENSMUST00000173369 CpdO89001 1377 aa9.87□□□□□ -0.83
Trim39-205ENSMUST00000173369 Usp17ldG5E8G2 545 aa9.87□□□□□ -0.83
Trim39-205ENSMUST00000173369 Usp17lcG5E8I7 545 aa9.87□□□□□ -0.83
Trim39-205ENSMUST00000173369 Tmprss11eQ5S248 423 aa9.87□□□□□ -0.83
Trim39-205ENSMUST00000173369 Pde3bQ61409 1100 aa9.87□□□□□ -0.83
Trim39-205ENSMUST00000173369 Usp50Q6P8X6 390 aa9.87□□□□□ -0.83
Trim39-205ENSMUST00000173369 Zbtb39Q6PDK0 712 aa9.87□□□□□ -0.83
Trim39-205ENSMUST00000173369 Ppip5k2Q6ZQB6 1129 aa9.87□□□□□ -0.83
Trim39-205ENSMUST00000173369 Mboat7Q8CHK3 473 aa9.87□□□□□ -0.83
Trim39-205ENSMUST00000173369 Pla2g12bQ99P27 195 aa9.87□□□□□ -0.83
Trim39-205ENSMUST00000173369 Bcs1lQ9CZP5 418 aa9.87□□□□□ -0.83
Trim39-205ENSMUST00000173369 Aox3G3X982 1335 aa9.87□□□□□ -0.83
Trim39-205ENSMUST00000173369 Phactr2B1AVP0 632 aa9.87□□□□□ -0.83
Trim39-205ENSMUST00000173369 Oog1E9Q5G7 496 aa9.87□□□□□ -0.83
Trim39-205ENSMUST00000173369 Cxcl9P18340 126 aa9.87□□□□□ -0.83
Trim39-205ENSMUST00000173369 Irf6P97431 467 aa9.87□□□□□ -0.83
Trim39-205ENSMUST00000173369 Ddx49Q4FZF3 480 aaKnown RBP9.87□□□□□ -0.83
Trim39-205ENSMUST00000173369 Abhd15Q5F2F2 459 aa9.87□□□□□ -0.83
Trim39-205ENSMUST00000173369 Ttll4Q80UG8 1193 aa9.87□□□□□ -0.83
Trim39-205ENSMUST00000173369 Rbm19Q8R3C6 952 aaKnown RBP9.87□□□□□ -0.83
Trim39-205ENSMUST00000173369 Zmynd8A2A484 1235 aaKnown RBP9.86□□□□□ -0.83
Trim39-205ENSMUST00000173369 Adam7O35227 789 aa9.86□□□□□ -0.83
Trim39-205ENSMUST00000173369 Copb2O55029 905 aa9.86□□□□□ -0.83
Trim39-205ENSMUST00000173369 PhaxQ9JJT9 385 aaKnown RBP9.86□□□□□ -0.83
Trim39-205ENSMUST00000173369 Vcam1P29533 739 aa9.86□□□□□ -0.83
Trim39-205ENSMUST00000173369 Gm11437Q5QR91 290 aa9.86□□□□□ -0.83
Trim39-205ENSMUST00000173369 Olfr118Q7TRJ6 321 aa9.86□□□□□ -0.83
Trim39-205ENSMUST00000173369 Phf20Q8BLG0 1010 aaKnown RBP9.86□□□□□ -0.83
Trim39-205ENSMUST00000173369 Cdca7lQ922M5 438 aa9.86□□□□□ -0.83
Trim39-205ENSMUST00000173369 Tjap1Q9DCD5 539 aa9.86□□□□□ -0.83
Trim39-205ENSMUST00000173369 Myh14Q6URW6 2000 aa9.86□□□□□ -0.83
Trim39-205ENSMUST00000173369 Slc27a3O88561 667 aa9.86□□□□□ -0.83
Trim39-205ENSMUST00000173369 Pde11aP0C1Q2 933 aa9.86□□□□□ -0.83
Trim39-205ENSMUST00000173369 Mmp20P57748 482 aa9.86□□□□□ -0.83
Trim39-205ENSMUST00000173369 Qrich1Q3UA37 777 aa9.86□□□□□ -0.83
Trim39-205ENSMUST00000173369 Stxbp2Q64324 593 aa9.86□□□□□ -0.83
Trim39-205ENSMUST00000173369 Tmc4Q7TQ65 694 aa9.86□□□□□ -0.83
Trim39-205ENSMUST00000173369 Klrc1Q9Z202 244 aa9.86□□□□□ -0.83
Trim39-205ENSMUST00000173369 Pnpla6Q3TRM4 1355 aa9.85□□□□□ -0.83
Trim39-205ENSMUST00000173369 Kcng1A2BDX4 514 aa9.85□□□□□ -0.83
Trim39-205ENSMUST00000173369 L1camP11627 1260 aa9.85□□□□□ -0.83
Trim39-205ENSMUST00000173369 Lamc2Q61092 1191 aa9.85□□□□□ -0.83
Trim39-205ENSMUST00000173369 Dpp8Q80YA7 892 aa9.85□□□□□ -0.83
Trim39-205ENSMUST00000173369 Tsc2Q61037 1814 aa9.85□□□□□ -0.83
Trim39-205ENSMUST00000173369 Cyp2d34L7N463 504 aa9.85□□□□□ -0.83
Trim39-205ENSMUST00000173369 HunkO88866 714 aa9.85□□□□□ -0.83
Trim39-205ENSMUST00000173369 Ccdc84Q4VA36 332 aaKnown RBP9.85□□□□□ -0.83
Trim39-205ENSMUST00000173369 IbspQ61711 324 aa9.85□□□□□ -0.83
Trim39-205ENSMUST00000173369 PaoxQ8C0L6 504 aa9.85□□□□□ -0.83
Trim39-205ENSMUST00000173369 Slc4a8Q8JZR6 1089 aa9.85□□□□□ -0.83
Trim39-205ENSMUST00000173369 Cdk8Q8R3L8 464 aa9.85□□□□□ -0.83
Trim39-205ENSMUST00000173369 Usp33Q8R5K2 909 aa9.85□□□□□ -0.83
Trim39-205ENSMUST00000173369 Trex1Q91XB0 314 aa9.85□□□□□ -0.83
Trim39-205ENSMUST00000173369 Myh2G3UW82 1942 aa9.85□□□□□ -0.83
Trim39-205ENSMUST00000173369 Rad50P70388 1312 aa9.84□□□□□ -0.83
Trim39-205ENSMUST00000173369 Stx8O88983 236 aa9.84□□□□□ -0.83
Trim39-205ENSMUST00000173369 Znf667Q2TL60 609 aa9.84□□□□□ -0.83
Trim39-205ENSMUST00000173369 Otud5Q3U2S4 566 aa9.84□□□□□ -0.83
Trim39-205ENSMUST00000173369 Akap4Q60662 849 aa9.84□□□□□ -0.83
Trim39-205ENSMUST00000173369 GnptabQ69ZN6 1235 aa9.84□□□□□ -0.83
Trim39-205ENSMUST00000173369 Tacc1Q6Y685 774 aa9.84□□□□□ -0.83
Trim39-205ENSMUST00000173369 Ubxn10Q8BG34 277 aa9.84□□□□□ -0.83
Trim39-205ENSMUST00000173369 Inpp5bQ8K337 993 aa9.84□□□□□ -0.83
Trim39-205ENSMUST00000173369 Myh7Q91Z83 1935 aa9.84□□□□□ -0.83
Trim39-205ENSMUST00000173369 HttP42859 3119 aa9.84□□□□□ -0.83
Trim39-205ENSMUST00000173369 Peak1Q69Z38 1735 aa9.84□□□□□ -0.83
Trim39-205ENSMUST00000173369 Irgm2A0A140LIF8 407 aa9.84□□□□□ -0.83
Trim39-205ENSMUST00000173369 Anapc15-psA0A140T8L6 141 aa9.84□□□□□ -0.83
Trim39-205ENSMUST00000173369 Lipo1J3QME6 396 aa9.84□□□□□ -0.83
Trim39-205ENSMUST00000173369 Ptpn12P35831 775 aa9.84□□□□□ -0.83
Trim39-205ENSMUST00000173369 SobpQ0P5V2 864 aa9.84□□□□□ -0.83
Trim39-205ENSMUST00000173369 Ces3aQ63880 571 aa9.84□□□□□ -0.83
Trim39-205ENSMUST00000173369 Tekt3Q6X6Z7 490 aa9.84□□□□□ -0.83
Trim39-205ENSMUST00000173369 Ces3bQ8VCU1 571 aa9.84□□□□□ -0.83
Trim39-205ENSMUST00000173369 Tmod2Q9JKK7 351 aa9.84□□□□□ -0.83
Trim39-205ENSMUST00000173369 Psme4Q5SSW2 1843 aa9.84□□□□□ -0.83
Trim39-205ENSMUST00000173369 Arrdc4A0A0B4J1F4 415 aa9.83□□□□□ -0.84
Trim39-205ENSMUST00000173369 Ano3A2AHL1 981 aa9.83□□□□□ -0.84
Trim39-205ENSMUST00000173369 A430078G23RikE9Q7Y4 484 aa9.83□□□□□ -0.84
Trim39-205ENSMUST00000173369 Slc1a4O35874 532 aa9.83□□□□□ -0.84
Trim39-205ENSMUST00000173369 Sept2P42208 361 aaKnown RBP9.83□□□□□ -0.84
Trim39-205ENSMUST00000173369 Dync1li2Q6PDL0 492 aaKnown RBP9.83□□□□□ -0.84
Trim39-205ENSMUST00000173369 Zbtb43Q9DAI4 467 aa9.83□□□□□ -0.84
Trim39-205ENSMUST00000173369 Tcof1O08784 1320 aaKnown RBP9.83□□□□□ -0.84
Trim39-205ENSMUST00000173369 Lekr1B2RVN1 116 aa9.83□□□□□ -0.84
Retrieved 100 of 22,080 RNA–protein pairs in 13 ms