RNA–Protein interactions for RNA: ENSMUST00000119896.1

Ssr3-202, Transcript of Translocon-associated protein subunit gamma, mousemouse

TSL 1 (best) BASIC

Gene Ssr3, Length 1,469 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr3-202ENSMUST00000119896 Ccdc84Q4VA36 332 aaKnown RBP11.25□□□□□ -0.61
Ssr3-202ENSMUST00000119896 Pla2g4fQ50L41 855 aa11.25□□□□□ -0.61
Ssr3-202ENSMUST00000119896 Mctp2Q5RJH2 878 aa11.25□□□□□ -0.61
Ssr3-202ENSMUST00000119896 Crhr2Q60748 411 aa11.25□□□□□ -0.61
Ssr3-202ENSMUST00000119896 Fam196bQ6GQV1 535 aa11.25□□□□□ -0.61
Ssr3-202ENSMUST00000119896 Fndc3bQ6NWW9 1207 aaKnown RBP11.25□□□□□ -0.61
Ssr3-202ENSMUST00000119896 Tmem266Q8BZB3 538 aa11.25□□□□□ -0.61
Ssr3-202ENSMUST00000119896 Calhm4Q8CE93 315 aa11.25□□□□□ -0.61
Ssr3-202ENSMUST00000119896 Zswim3Q8CFL8 695 aa11.25□□□□□ -0.61
Ssr3-202ENSMUST00000119896 Gpsm2Q8VDU0 679 aa11.25□□□□□ -0.61
Ssr3-202ENSMUST00000119896 Syt17Q920M7 470 aa11.25□□□□□ -0.61
Ssr3-202ENSMUST00000119896 MthfsQ9D110 203 aa11.25□□□□□ -0.61
Ssr3-202ENSMUST00000119896 FliiQ9JJ28 1271 aa11.25□□□□□ -0.61
Ssr3-202ENSMUST00000119896 Abcc4E9Q236 1325 aa11.25□□□□□ -0.61
Ssr3-202ENSMUST00000119896 Disp2Q8CIP5 1345 aa11.25□□□□□ -0.61
Ssr3-202ENSMUST00000119896 Btbd1P58544 488 aa11.24□□□□□ -0.61
Ssr3-202ENSMUST00000119896 Esyt2Q3TZZ7 845 aa11.24□□□□□ -0.61
Ssr3-202ENSMUST00000119896 Dync1li2Q6PDL0 492 aaKnown RBP11.24□□□□□ -0.61
Ssr3-202ENSMUST00000119896 Ube2oQ6ZPJ3 1288 aa11.24□□□□□ -0.61
Ssr3-202ENSMUST00000119896 Spata7Q80VP2 582 aa11.24□□□□□ -0.61
Ssr3-202ENSMUST00000119896 Ube3bQ9ES34 1070 aa11.24□□□□□ -0.61
Ssr3-202ENSMUST00000119896 Acot3Q9QYR7 432 aa11.24□□□□□ -0.61
Ssr3-202ENSMUST00000119896 Tsc2Q61037 1814 aa11.23□□□□□ -0.61
Ssr3-202ENSMUST00000119896 TnksQ6PFX9 1320 aa11.23□□□□□ -0.61
Ssr3-202ENSMUST00000119896 Hsp90b1P08113 802 aaKnown RBP11.23□□□□□ -0.61
Ssr3-202ENSMUST00000119896 Morf4l1P60762 362 aa11.23□□□□□ -0.61
Ssr3-202ENSMUST00000119896 Ptpn18Q61152 453 aa11.23□□□□□ -0.61
Ssr3-202ENSMUST00000119896 Fsip1Q9D3V5 435 aa11.23□□□□□ -0.61
Ssr3-202ENSMUST00000119896 Sept12Q9D451 317 aa11.23□□□□□ -0.61
Ssr3-202ENSMUST00000119896 Capn10Q9ESK3 666 aa11.23□□□□□ -0.61
Ssr3-202ENSMUST00000119896 Sart3Q9JLI8 962 aaKnown RBP11.23□□□□□ -0.61
Ssr3-202ENSMUST00000119896 Dynll1P63168 89 aa11.22□□□□□ -0.61
Ssr3-202ENSMUST00000119896 Gas1Q01721 343 aa11.22□□□□□ -0.61
Ssr3-202ENSMUST00000119896 Rpusd2Q149F1 553 aa11.22□□□□□ -0.61
Ssr3-202ENSMUST00000119896 Prr7Q3V0I2 269 aa11.22□□□□□ -0.61
Ssr3-202ENSMUST00000119896 Cyp24a1Q64441 514 aa11.22□□□□□ -0.61
Ssr3-202ENSMUST00000119896 Ltv1Q6NSQ7 470 aaKnown RBP11.22□□□□□ -0.61
Ssr3-202ENSMUST00000119896 Krt24A1L317 512 aa11.21□□□□□ -0.61
Ssr3-202ENSMUST00000119896 DnttP09838 530 aa11.21□□□□□ -0.61
Ssr3-202ENSMUST00000119896 Atp9bP98195 1146 aa11.21□□□□□ -0.61
Ssr3-202ENSMUST00000119896 Cntnap5bQ0V8T8 1292 aa11.21□□□□□ -0.61
Ssr3-202ENSMUST00000119896 Ube2q1Q7TSS2 422 aa11.21□□□□□ -0.61
Ssr3-202ENSMUST00000119896 KhnynQ80U38 671 aa11.21□□□□□ -0.61
Ssr3-202ENSMUST00000119896 Adck5Q80V03 582 aa11.21□□□□□ -0.61
Ssr3-202ENSMUST00000119896 Pramel6Q810Y9 485 aa11.21□□□□□ -0.61
Ssr3-202ENSMUST00000119896 Nim1kQ8BHI9 436 aa11.21□□□□□ -0.61
Ssr3-202ENSMUST00000119896 Inpp5bQ8K337 993 aa11.21□□□□□ -0.61
Ssr3-202ENSMUST00000119896 Xrn2Q9DBR1 951 aaKnown RBP11.21□□□□□ -0.61
Ssr3-202ENSMUST00000119896 PfkpQ9WUA3 784 aaKnown RBP11.21□□□□□ -0.61
Ssr3-202ENSMUST00000119896 Btnl4A2CG29 586 aa11.2□□□□□ -0.62
Ssr3-202ENSMUST00000119896 Csf2raQ00941 388 aa11.2□□□□□ -0.62
Ssr3-202ENSMUST00000119896 Rnf157Q3TEL6 685 aa11.2□□□□□ -0.62
Ssr3-202ENSMUST00000119896 Btg1-ps1Q3V0S2 161 aa11.2□□□□□ -0.62
Ssr3-202ENSMUST00000119896 Btg1-ps2Q3V0X0 161 aa11.2□□□□□ -0.62
Ssr3-202ENSMUST00000119896 Mum1l1Q4VA55 681 aa11.2□□□□□ -0.62
Ssr3-202ENSMUST00000119896 Zfp90Q61967 636 aa11.2□□□□□ -0.62
Ssr3-202ENSMUST00000119896 Zfp341Q6PGC9 846 aa11.2□□□□□ -0.62
Ssr3-202ENSMUST00000119896 Ttc7aQ8BGB2 858 aa11.2□□□□□ -0.62
Ssr3-202ENSMUST00000119896 Bri3bpQ8BXV2 253 aa11.2□□□□□ -0.62
Ssr3-202ENSMUST00000119896 Slc26a8Q8R0C3 999 aa11.2□□□□□ -0.62
Ssr3-202ENSMUST00000119896 Apbb1ipQ8R5A3 670 aa11.2□□□□□ -0.62
Ssr3-202ENSMUST00000119896 Krt25Q8VCW2 446 aa11.2□□□□□ -0.62
Ssr3-202ENSMUST00000119896 Trex1Q91XB0 314 aa11.2□□□□□ -0.62
Ssr3-202ENSMUST00000119896 Pla2g12bQ99P27 195 aa11.2□□□□□ -0.62
Ssr3-202ENSMUST00000119896 Sall2Q9QX96 1004 aa11.2□□□□□ -0.62
Ssr3-202ENSMUST00000119896 Cspp1B2RX88 1205 aa11.19□□□□□ -0.62
Ssr3-202ENSMUST00000119896 Cyp3a57D3YYZ0 503 aa11.19□□□□□ -0.62
Ssr3-202ENSMUST00000119896 Gm9857F7CXR1 130 aa11.19□□□□□ -0.62
Ssr3-202ENSMUST00000119896 Tmigd3G3X8R9 209 aa11.19□□□□□ -0.62
Ssr3-202ENSMUST00000119896 Col19a1Q0VF58 1136 aa11.19□□□□□ -0.62
Ssr3-202ENSMUST00000119896 Fsd2Q8BZ52 692 aa11.19□□□□□ -0.62
Ssr3-202ENSMUST00000119896 Smoc2Q8CD91 447 aa11.19□□□□□ -0.62
Ssr3-202ENSMUST00000119896 Trim32Q8CH72 655 aa11.19□□□□□ -0.62
Ssr3-202ENSMUST00000119896 Ppp1r11Q8K1L5 131 aa11.19□□□□□ -0.62
Ssr3-202ENSMUST00000119896 Pof1bQ8K4L4 587 aa11.19□□□□□ -0.62
Ssr3-202ENSMUST00000119896 Ero1aQ8R180 464 aa11.19□□□□□ -0.62
Ssr3-202ENSMUST00000119896 Smc1bQ920F6 1248 aa11.19□□□□□ -0.62
Ssr3-202ENSMUST00000119896 Ddx50Q99MJ9 734 aaKnown RBP11.19□□□□□ -0.62
Ssr3-202ENSMUST00000119896 Rai14Q9EP71 979 aaKnown RBP11.19□□□□□ -0.62
Ssr3-202ENSMUST00000119896 Cxcl11Q9JHH5 100 aa11.19□□□□□ -0.62
Ssr3-202ENSMUST00000119896 Usp31E9Q6Y8 1344 aa11.19□□□□□ -0.62
Ssr3-202ENSMUST00000119896 RptorQ8K4Q0 1335 aa11.19□□□□□ -0.62
Ssr3-202ENSMUST00000119896 Mmp8O70138 465 aa11.19□□□□□ -0.62
Ssr3-202ENSMUST00000119896 Tm6sf1P58749 370 aa11.19□□□□□ -0.62
Ssr3-202ENSMUST00000119896 Fam178bQ24JP3 464 aa11.19□□□□□ -0.62
Ssr3-202ENSMUST00000119896 PomkQ3TUA9 349 aa11.19□□□□□ -0.62
Ssr3-202ENSMUST00000119896 Qrich1Q3UA37 777 aa11.19□□□□□ -0.62
Ssr3-202ENSMUST00000119896 Zbtb45Q52KG4 520 aa11.19□□□□□ -0.62
Ssr3-202ENSMUST00000119896 Cracr2bQ80ZJ8 394 aa11.19□□□□□ -0.62
Ssr3-202ENSMUST00000119896 Trib2Q8K4K3 343 aa11.19□□□□□ -0.62
Ssr3-202ENSMUST00000119896 Pank1Q8K4K6 548 aa11.19□□□□□ -0.62
Ssr3-202ENSMUST00000119896 Ptcd2Q8R3K3 381 aaKnown RBP11.19□□□□□ -0.62
Ssr3-202ENSMUST00000119896 Bag3Q9JLV1 577 aaKnown RBP11.19□□□□□ -0.62
Ssr3-202ENSMUST00000119896 Myh3P13541 1940 aa11.18□□□□□ -0.62
Ssr3-202ENSMUST00000119896 Prss40A6H6T1 365 aa11.18□□□□□ -0.62
Ssr3-202ENSMUST00000119896 MyocO70624 490 aa11.18□□□□□ -0.62
Ssr3-202ENSMUST00000119896 MycP01108 439 aa11.18□□□□□ -0.62
Ssr3-202ENSMUST00000119896 Nol8Q3UHX0 1147 aaKnown RBP11.18□□□□□ -0.62
Ssr3-202ENSMUST00000119896 Ncbp1Q3UYV9 790 aaKnown RBP11.18□□□□□ -0.62
Ssr3-202ENSMUST00000119896 Cfap52Q5F201 620 aa11.18□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 12.7 ms