RNA–Protein interactions for RNA: ENSMUST00000110301.1

Clcn3-204, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,099 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-204ENSMUST00000110301 AsnsQ61024 561 aa15.24■□□□□ 0.03
Clcn3-204ENSMUST00000110301 Madcam1Q61826 405 aa15.24■□□□□ 0.03
Clcn3-204ENSMUST00000110301 IqcgQ80W32 419 aa15.24■□□□□ 0.03
Clcn3-204ENSMUST00000110301 Dpp8Q80YA7 892 aa15.24■□□□□ 0.03
Clcn3-204ENSMUST00000110301 Necab1Q8BG18 352 aa15.24■□□□□ 0.03
Clcn3-204ENSMUST00000110301 Zfp202Q8C879 641 aa15.24■□□□□ 0.03
Clcn3-204ENSMUST00000110301 Cd22P35329 862 aa15.24■□□□□ 0.03
Clcn3-204ENSMUST00000110301 Cdkn1cP49919 348 aa15.24■□□□□ 0.03
Clcn3-204ENSMUST00000110301 RragbQ6NTA4 374 aa15.24■□□□□ 0.03
Clcn3-204ENSMUST00000110301 PicalmQ7M6Y3 660 aaKnown RBP15.24■□□□□ 0.03
Clcn3-204ENSMUST00000110301 Paf1Q8K2T8 535 aa15.24■□□□□ 0.03
Clcn3-204ENSMUST00000110301 Calcoco2A2A6M5 331 aa15.24■□□□□ 0.03
Clcn3-204ENSMUST00000110301 Nap1l1P28656 391 aaKnown RBP15.24■□□□□ 0.03
Clcn3-204ENSMUST00000110301 Pald1P70261 859 aa15.24■□□□□ 0.03
Clcn3-204ENSMUST00000110301 Tmtc2Q56A06 836 aa15.24■□□□□ 0.03
Clcn3-204ENSMUST00000110301 Adck5Q80V03 582 aa15.24■□□□□ 0.03
Clcn3-204ENSMUST00000110301 Ankrd1Q9CR42 319 aa15.24■□□□□ 0.03
Clcn3-204ENSMUST00000110301 Sept12Q9D451 317 aa15.24■□□□□ 0.03
Clcn3-204ENSMUST00000110301 Pik3c2aQ61194 1686 aa15.24■□□□□ 0.03
Clcn3-204ENSMUST00000110301 Foxp1P58462 705 aa15.23■□□□□ 0.03
Clcn3-204ENSMUST00000110301 Slc27a1Q60714 646 aa15.23■□□□□ 0.03
Clcn3-204ENSMUST00000110301 Edrf1Q6GQV7 1239 aa15.23■□□□□ 0.03
Clcn3-204ENSMUST00000110301 Ccdc122Q8BVN0 290 aa15.23■□□□□ 0.03
Clcn3-204ENSMUST00000110301 Pdcd6ipQ9WU78 869 aaKnown RBP15.23■□□□□ 0.03
Clcn3-204ENSMUST00000110301 Sycp2lA0A0M3U1B0 842 aa15.23■□□□□ 0.03
Clcn3-204ENSMUST00000110301 Atp6v0a2P15920 856 aa15.23■□□□□ 0.03
Clcn3-204ENSMUST00000110301 Fdx1P46656 188 aa15.23■□□□□ 0.03
Clcn3-204ENSMUST00000110301 Lrrfip1Q3UZ39 729 aaKnown RBP15.23■□□□□ 0.03
Clcn3-204ENSMUST00000110301 Ankrd40Q5SUE8 363 aa15.23■□□□□ 0.03
Clcn3-204ENSMUST00000110301 Smarcc2Q6PDG5 1213 aa15.23■□□□□ 0.03
Clcn3-204ENSMUST00000110301 Ano10Q8BH79 659 aa15.23■□□□□ 0.03
Clcn3-204ENSMUST00000110301 Gpcpd1Q8C0L9 675 aa15.23■□□□□ 0.03
Clcn3-204ENSMUST00000110301 Sf3b3Q921M3 1217 aaKnown RBP15.23■□□□□ 0.03
Clcn3-204ENSMUST00000110301 Lmtk3Q5XJV6 1424 aa15.23■□□□□ 0.03
Clcn3-204ENSMUST00000110301 LdhaP06151 332 aaKnown RBP15.23■□□□□ 0.03
Clcn3-204ENSMUST00000110301 Armc2Q3URY6 854 aa15.23■□□□□ 0.03
Clcn3-204ENSMUST00000110301 Luc7l2Q7TNC4 392 aaKnown RBP15.23■□□□□ 0.03
Clcn3-204ENSMUST00000110301 Pus7lQ8CE46 702 aa15.23■□□□□ 0.03
Clcn3-204ENSMUST00000110301 HdlbpQ8VDJ3 1268 aaKnown RBP15.23■□□□□ 0.03
Clcn3-204ENSMUST00000110301 Klhl10Q9D5V2 608 aa15.23■□□□□ 0.03
Clcn3-204ENSMUST00000110301 Myoz2Q9JJW5 264 aa15.23■□□□□ 0.03
Clcn3-204ENSMUST00000110301 Lnx1O70263 728 aa15.22■□□□□ 0.03
Clcn3-204ENSMUST00000110301 PparaP23204 468 aa15.22■□□□□ 0.03
Clcn3-204ENSMUST00000110301 ErmnQ5EBJ4 281 aa15.22■□□□□ 0.03
Clcn3-204ENSMUST00000110301 Tom1l2Q5SRX1 507 aa15.22■□□□□ 0.03
Clcn3-204ENSMUST00000110301 Spocd1B1ASB6 936 aa15.22■□□□□ 0.03
Clcn3-204ENSMUST00000110301 Krt40Q6IFX3 439 aa15.22■□□□□ 0.03
Clcn3-204ENSMUST00000110301 Tbc1d23Q8K0F1 684 aa15.22■□□□□ 0.03
Clcn3-204ENSMUST00000110301 Mettl5Q8K1A0 209 aa15.22■□□□□ 0.03
Clcn3-204ENSMUST00000110301 PcQ05920 1178 aa15.22■□□□□ 0.03
Clcn3-204ENSMUST00000110301 Nlrp2Q4PLS0 1046 aaKnown RBP15.22■□□□□ 0.03
Clcn3-204ENSMUST00000110301 Zfp317Q8C0Q5 607 aa15.22■□□□□ 0.03
Clcn3-204ENSMUST00000110301 CenpqQ9CPQ5 267 aa15.22■□□□□ 0.03
Clcn3-204ENSMUST00000110301 Sipa1l2Q80TE4 1722 aa15.22■□□□□ 0.03
Clcn3-204ENSMUST00000110301 Zscan18E9PUD6 809 aa15.22■□□□□ 0.03
Clcn3-204ENSMUST00000110301 Nmt2O70311 529 aa15.22■□□□□ 0.03
Clcn3-204ENSMUST00000110301 Chrna5Q2MKA5 467 aa15.22■□□□□ 0.03
Clcn3-204ENSMUST00000110301 Cyp2c67Q569X9 491 aa15.22■□□□□ 0.03
Clcn3-204ENSMUST00000110301 Map3k15A2AQW0 1331 aa15.21■□□□□ 0.03
Clcn3-204ENSMUST00000110301 Tbc1d2B1AVH7 922 aa15.21■□□□□ 0.03
Clcn3-204ENSMUST00000110301 Gm9992B2RWK3 458 aa15.21■□□□□ 0.03
Clcn3-204ENSMUST00000110301 1700113H08RikE9Q9Q5 327 aa15.21■□□□□ 0.03
Clcn3-204ENSMUST00000110301 Cyp2d10P24456 504 aa15.21■□□□□ 0.03
Clcn3-204ENSMUST00000110301 Sycp1Q62209 993 aa15.21■□□□□ 0.03
Clcn3-204ENSMUST00000110301 Unc93aQ710D3 458 aa15.21■□□□□ 0.03
Clcn3-204ENSMUST00000110301 Mrvi1Q9WUX5 899 aaKnown RBP15.21■□□□□ 0.03
Clcn3-204ENSMUST00000110301 Aox4Q3TYQ9 1336 aa15.21■□□□□ 0.03
Clcn3-204ENSMUST00000110301 Pip4k2aO70172 405 aa15.21■□□□□ 0.03
Clcn3-204ENSMUST00000110301 Asic1Q6NXK8 526 aa15.21■□□□□ 0.03
Clcn3-204ENSMUST00000110301 Ano6Q6P9J9 911 aa15.21■□□□□ 0.03
Clcn3-204ENSMUST00000110301 Clic6Q8BHB9 596 aa15.21■□□□□ 0.03
Clcn3-204ENSMUST00000110301 Ercc6lQ8BHK9 1240 aa15.21■□□□□ 0.03
Clcn3-204ENSMUST00000110301 Slc13a4Q8BZ82 625 aa15.21■□□□□ 0.03
Clcn3-204ENSMUST00000110301 Terb1Q8C0V1 768 aa15.21■□□□□ 0.03
Clcn3-204ENSMUST00000110301 Cnpy3Q9DAU1 276 aa15.21■□□□□ 0.03
Clcn3-204ENSMUST00000110301 Sik3Q6P4S6 1311 aa15.21■□□□□ 0.03
Clcn3-204ENSMUST00000110301 Ssrp1Q08943 708 aaKnown RBP15.21■□□□□ 0.02
Clcn3-204ENSMUST00000110301 Hps6Q8BLY7 805 aa15.21■□□□□ 0.02
Clcn3-204ENSMUST00000110301 Tab2Q99K90 693 aa15.21■□□□□ 0.02
Clcn3-204ENSMUST00000110301 Stk39Q9Z1W9 556 aa15.21■□□□□ 0.02
Clcn3-204ENSMUST00000110301 Eddm13E9Q7F5 164 aa15.2■□□□□ 0.02
Clcn3-204ENSMUST00000110301 Wdr70Q3TWF6 657 aa15.2■□□□□ 0.02
Clcn3-204ENSMUST00000110301 Cep63Q3UPP8 700 aa15.2■□□□□ 0.02
Clcn3-204ENSMUST00000110301 CtcfQ61164 736 aaKnown RBP15.2■□□□□ 0.02
Clcn3-204ENSMUST00000110301 Fam196bQ6GQV1 535 aa15.2■□□□□ 0.02
Clcn3-204ENSMUST00000110301 Usp50Q6P8X6 390 aa15.2■□□□□ 0.02
Clcn3-204ENSMUST00000110301 Ano2Q8CFW1 1002 aa15.2■□□□□ 0.02
Clcn3-204ENSMUST00000110301 Trmt112Q9DCG9 125 aa15.2■□□□□ 0.02
Clcn3-204ENSMUST00000110301 Zfp804bA0A0G2JGH6 1343 aa15.2■□□□□ 0.02
Clcn3-204ENSMUST00000110301 Cyp3a59D3Z2W7 503 aa15.2■□□□□ 0.02
Clcn3-204ENSMUST00000110301 Lrrc36Q3V0M2 755 aa15.2■□□□□ 0.02
Clcn3-204ENSMUST00000110301 Ppp2r5bQ6PD28 497 aa15.2■□□□□ 0.02
Clcn3-204ENSMUST00000110301 Nfat5Q9WV30 1534 aa15.2■□□□□ 0.02
Clcn3-204ENSMUST00000110301 Palm3A2TJV2 734 aa15.2■□□□□ 0.02
Clcn3-204ENSMUST00000110301 Cacna2d4Q5RJF7 1116 aa15.2■□□□□ 0.02
Clcn3-204ENSMUST00000110301 Npy5rO70342 466 aa15.19■□□□□ 0.02
Clcn3-204ENSMUST00000110301 Cfap157Q0VFX2 523 aa15.19■□□□□ 0.02
Clcn3-204ENSMUST00000110301 Arhgef6Q8K4I3 771 aa15.19■□□□□ 0.02
Clcn3-204ENSMUST00000110301 Pkd2l2Q9JLG4 621 aa15.19■□□□□ 0.02
Clcn3-204ENSMUST00000110301 Gpr101Q80T62 511 aa15.19■□□□□ 0.02
Retrieved 100 of 22,080 RNA–protein pairs in 29.5 ms