RNA–Protein interactions for RNA: ENSMUST00000088973.10

Smarca1-202, Transcript of Probable global transcription activator SNF2L1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Smarca1, Length 4,798 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca1-202ENSMUST00000088973 Krt20Q9D312 431 aa11.17□□□□□ -0.62
Smarca1-202ENSMUST00000088973 Fsip1Q9D3V5 435 aa11.17□□□□□ -0.62
Smarca1-202ENSMUST00000088973 Ddx23D3Z0M9 819 aaKnown RBP11.17□□□□□ -0.62
Smarca1-202ENSMUST00000088973 Gm20425E9Q035 978 aaKnown RBP11.17□□□□□ -0.62
Smarca1-202ENSMUST00000088973 SrprbP47758 269 aa11.17□□□□□ -0.62
Smarca1-202ENSMUST00000088973 Sap30bpQ02614 308 aa11.17□□□□□ -0.62
Smarca1-202ENSMUST00000088973 NfkbibQ60778 359 aa11.17□□□□□ -0.62
Smarca1-202ENSMUST00000088973 Clic6Q8BHB9 596 aa11.17□□□□□ -0.62
Smarca1-202ENSMUST00000088973 Tubgcp2Q921G8 905 aa11.17□□□□□ -0.62
Smarca1-202ENSMUST00000088973 Bbs5Q9CZQ9 341 aa11.17□□□□□ -0.62
Smarca1-202ENSMUST00000088973 Ebag9Q9D0V7 213 aa11.17□□□□□ -0.62
Smarca1-202ENSMUST00000088973 Znf335A2A5K6 1337 aa11.17□□□□□ -0.62
Smarca1-202ENSMUST00000088973 Sos2Q02384 1333 aa11.17□□□□□ -0.62
Smarca1-202ENSMUST00000088973 Nup160Q9Z0W3 1402 aaKnown RBP11.17□□□□□ -0.62
Smarca1-202ENSMUST00000088973 Tuft1O08970 390 aa11.17□□□□□ -0.62
Smarca1-202ENSMUST00000088973 Kif5cP28738 956 aaKnown RBP11.17□□□□□ -0.62
Smarca1-202ENSMUST00000088973 Kif2bQ8C0N1 668 aa11.17□□□□□ -0.62
Smarca1-202ENSMUST00000088973 Cbfa2t2O70374 594 aa11.16□□□□□ -0.62
Smarca1-202ENSMUST00000088973 Tbc1d9bQ5SVR0 1263 aa11.16□□□□□ -0.62
Smarca1-202ENSMUST00000088973 Cfap100Q80VN0 613 aa11.16□□□□□ -0.62
Smarca1-202ENSMUST00000088973 Wdr3Q8BHB4 942 aaKnown RBP11.16□□□□□ -0.62
Smarca1-202ENSMUST00000088973 Taf5lQ91WQ5 589 aa11.16□□□□□ -0.62
Smarca1-202ENSMUST00000088973 Asic2Q925H0 512 aa11.16□□□□□ -0.62
Smarca1-202ENSMUST00000088973 Cfap57Q9D180 1249 aa11.16□□□□□ -0.62
Smarca1-202ENSMUST00000088973 Ugt1a5B2RT14 529 aa11.16□□□□□ -0.62
Smarca1-202ENSMUST00000088973 Sept7O55131 436 aa11.16□□□□□ -0.62
Smarca1-202ENSMUST00000088973 NppbP40753 121 aa11.16□□□□□ -0.62
Smarca1-202ENSMUST00000088973 Nucks1Q80XU3 234 aaKnown RBP11.16□□□□□ -0.62
Smarca1-202ENSMUST00000088973 Bola3Q8CEI1 110 aa11.16□□□□□ -0.62
Smarca1-202ENSMUST00000088973 Ndufab1Q9CR21 156 aa11.16□□□□□ -0.62
Smarca1-202ENSMUST00000088973 Art2aP17981 287 aa11.16□□□□□ -0.62
Smarca1-202ENSMUST00000088973 Ccdc129Q14B48 1034 aa11.16□□□□□ -0.62
Smarca1-202ENSMUST00000088973 Sik1Q60670 779 aa11.16□□□□□ -0.62
Smarca1-202ENSMUST00000088973 Tubb2aQ7TMM9 445 aa11.16□□□□□ -0.62
Smarca1-202ENSMUST00000088973 Haus1Q8BHX1 278 aa11.16□□□□□ -0.62
Smarca1-202ENSMUST00000088973 Tubb2bQ9CWF2 445 aa11.16□□□□□ -0.62
Smarca1-202ENSMUST00000088973 Cpb1B2RS76 415 aa11.16□□□□□ -0.62
Smarca1-202ENSMUST00000088973 Atf5O70191 283 aa11.16□□□□□ -0.62
Smarca1-202ENSMUST00000088973 Tspyl1O88852 379 aa11.16□□□□□ -0.62
Smarca1-202ENSMUST00000088973 Cep63Q3UPP8 700 aa11.16□□□□□ -0.62
Smarca1-202ENSMUST00000088973 Arhgef1Q61210 920 aaKnown RBP11.16□□□□□ -0.62
Smarca1-202ENSMUST00000088973 Spata16Q8C636 571 aa11.16□□□□□ -0.62
Smarca1-202ENSMUST00000088973 Galnt15Q9D2N8 638 aa11.16□□□□□ -0.62
Smarca1-202ENSMUST00000088973 Lrp2bpQ9D4C6 346 aa11.16□□□□□ -0.62
Smarca1-202ENSMUST00000088973 Ccdc91Q9D8L5 442 aa11.16□□□□□ -0.62
Smarca1-202ENSMUST00000088973 Akap8Q9DBR0 687 aaKnown RBP11.16□□□□□ -0.62
Smarca1-202ENSMUST00000088973 Parp2O88554 559 aa11.15□□□□□ -0.62
Smarca1-202ENSMUST00000088973 Eif3j1Q3UGC7 261 aaKnown RBP11.15□□□□□ -0.62
Smarca1-202ENSMUST00000088973 Eif3j2Q66JS6 263 aa11.15□□□□□ -0.62
Smarca1-202ENSMUST00000088973 Unc5clQ6R653 518 aa11.15□□□□□ -0.62
Smarca1-202ENSMUST00000088973 PigbQ9JJQ0 542 aa11.15□□□□□ -0.62
Smarca1-202ENSMUST00000088973 Uhrf1bp1lA2RSJ4 1457 aa11.15□□□□□ -0.62
Smarca1-202ENSMUST00000088973 Kiaa1107Q80TK0 1369 aa11.15□□□□□ -0.62
Smarca1-202ENSMUST00000088973 Eef1dP57776 281 aaKnown RBP11.15□□□□□ -0.62
Smarca1-202ENSMUST00000088973 Dcaf5Q80T85 946 aa11.15□□□□□ -0.62
Smarca1-202ENSMUST00000088973 Klhl7Q8BUL5 586 aa11.15□□□□□ -0.62
Smarca1-202ENSMUST00000088973 Tnpo2Q99LG2 887 aaKnown RBP11.15□□□□□ -0.62
Smarca1-202ENSMUST00000088973 Psrc1Q9D0P7 329 aa11.15□□□□□ -0.62
Smarca1-202ENSMUST00000088973 Myl7Q9QVP4 175 aa11.15□□□□□ -0.62
Smarca1-202ENSMUST00000088973 Zkscan5Q9Z1D8 819 aa11.15□□□□□ -0.62
Smarca1-202ENSMUST00000088973 Magi3Q9EQJ9 1476 aa11.15□□□□□ -0.62
Smarca1-202ENSMUST00000088973 Ncapd2Q8K2Z4 1392 aa11.15□□□□□ -0.62
Smarca1-202ENSMUST00000088973 Speer2E9Q9U2 264 aa11.15□□□□□ -0.62
Smarca1-202ENSMUST00000088973 Atp2a2O55143 1044 aaKnown RBP11.15□□□□□ -0.62
Smarca1-202ENSMUST00000088973 Kifap3P70188 793 aa11.15□□□□□ -0.62
Smarca1-202ENSMUST00000088973 Prpf38aQ4FK66 312 aaKnown RBP11.15□□□□□ -0.62
Smarca1-202ENSMUST00000088973 Scaf1Q5U4C3 1256 aaKnown RBP11.15□□□□□ -0.62
Smarca1-202ENSMUST00000088973 Desi2Q9D291 194 aa11.15□□□□□ -0.62
Smarca1-202ENSMUST00000088973 Gucy1a3Q9ERL9 691 aa11.15□□□□□ -0.62
Smarca1-202ENSMUST00000088973 Hdac6Q9Z2V5 1149 aa11.15□□□□□ -0.62
Smarca1-202ENSMUST00000088973 Btn2a2A4QPC6 514 aa11.15□□□□□ -0.63
Smarca1-202ENSMUST00000088973 1700113H08RikE9Q9Q5 327 aa11.15□□□□□ -0.63
Smarca1-202ENSMUST00000088973 Akr1b8P45377 316 aa11.15□□□□□ -0.63
Smarca1-202ENSMUST00000088973 Mex3cQ05A36 652 aaKnown RBP11.15□□□□□ -0.63
Smarca1-202ENSMUST00000088973 DbnlQ62418 436 aa11.15□□□□□ -0.63
Smarca1-202ENSMUST00000088973 Slc7a6osQ7TPE5 306 aa11.15□□□□□ -0.63
Smarca1-202ENSMUST00000088973 Camsap3Q80VC9 1252 aa11.15□□□□□ -0.63
Smarca1-202ENSMUST00000088973 RragaQ80X95 313 aa11.15□□□□□ -0.63
Smarca1-202ENSMUST00000088973 Gbp7Q91Z40 638 aa11.15□□□□□ -0.63
Smarca1-202ENSMUST00000088973 FibpQ9JI19 357 aa11.15□□□□□ -0.63
Smarca1-202ENSMUST00000088973 Kdm6aO70546 1401 aa11.15□□□□□ -0.63
Smarca1-202ENSMUST00000088973 Col20a1Q923P0 1320 aa11.14□□□□□ -0.63
Smarca1-202ENSMUST00000088973 Mast1Q9R1L5 1570 aa11.14□□□□□ -0.63
Smarca1-202ENSMUST00000088973 Mcm5P49718 733 aa11.14□□□□□ -0.63
Smarca1-202ENSMUST00000088973 SbdsP70122 250 aa11.14□□□□□ -0.63
Smarca1-202ENSMUST00000088973 Pkp1P97350 728 aaKnown RBP11.14□□□□□ -0.63
Smarca1-202ENSMUST00000088973 Ints8Q80V86 995 aa11.14□□□□□ -0.63
Smarca1-202ENSMUST00000088973 Lzts2Q91YU6 671 aa11.14□□□□□ -0.63
Smarca1-202ENSMUST00000088973 Ssfa2Q922B9 1252 aa11.14□□□□□ -0.63
Smarca1-202ENSMUST00000088973 Exoc3l2D3YUP5 789 aa11.14□□□□□ -0.63
Smarca1-202ENSMUST00000088973 Dnajc21E9Q8D0 531 aa11.14□□□□□ -0.63
Smarca1-202ENSMUST00000088973 Ap1b1O35643 943 aaKnown RBP11.14□□□□□ -0.63
Smarca1-202ENSMUST00000088973 Cct6aP80317 531 aaKnown RBP11.14□□□□□ -0.63
Smarca1-202ENSMUST00000088973 Eya3P97480 510 aa11.14□□□□□ -0.63
Smarca1-202ENSMUST00000088973 Hirip3Q8BLH7 601 aa11.14□□□□□ -0.63
Smarca1-202ENSMUST00000088973 Acot11Q8VHQ9 594 aa11.14□□□□□ -0.63
Smarca1-202ENSMUST00000088973 Bmp2kQ91Z96 1138 aa11.14□□□□□ -0.63
Smarca1-202ENSMUST00000088973 Fam228aQ8CDW1 299 aa11.14□□□□□ -0.63
Smarca1-202ENSMUST00000088973 HmcesQ8R1M0 353 aaKnown RBP11.14□□□□□ -0.63
Smarca1-202ENSMUST00000088973 JmyQ9QXM1 983 aa11.14□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 21 ms