RNA–Protein interactions for RNA: ENSMUST00000086483.3

Ccdc60-202, Transcript of Coiled-coil domain-containing protein 60, mousemouse

TSL 1 (best) BASIC

Gene Ccdc60, Length 2,168 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60-202ENSMUST00000086483 Myh6Q02566 1938 aaKnown RBP13.39□□□□□ -0.27
Ccdc60-202ENSMUST00000086483 Rexo5D3YW29 759 aa13.38□□□□□ -0.27
Ccdc60-202ENSMUST00000086483 HmgcrQ01237 887 aa13.38□□□□□ -0.27
Ccdc60-202ENSMUST00000086483 Ncf1Q09014 390 aa13.38□□□□□ -0.27
Ccdc60-202ENSMUST00000086483 Mrgprb1Q3UG61 350 aa13.38□□□□□ -0.27
Ccdc60-202ENSMUST00000086483 Dpp9Q8BVG4 862 aa13.38□□□□□ -0.27
Ccdc60-202ENSMUST00000086483 Epb41l3Q9WV92 929 aa13.38□□□□□ -0.27
Ccdc60-202ENSMUST00000086483 Gm9857F7CXR1 130 aa13.38□□□□□ -0.27
Ccdc60-202ENSMUST00000086483 Ptpn22P29352 802 aa13.38□□□□□ -0.27
Ccdc60-202ENSMUST00000086483 Rnf157Q3TEL6 685 aa13.38□□□□□ -0.27
Ccdc60-202ENSMUST00000086483 Fndc3bQ6NWW9 1207 aaKnown RBP13.38□□□□□ -0.27
Ccdc60-202ENSMUST00000086483 Cfap69Q8BH53 942 aa13.38□□□□□ -0.27
Ccdc60-202ENSMUST00000086483 Riok1Q922Q2 567 aa13.38□□□□□ -0.27
Ccdc60-202ENSMUST00000086483 Scnn1bQ9WU38 638 aa13.38□□□□□ -0.27
Ccdc60-202ENSMUST00000086483 Rad9aQ9Z0F6 389 aa13.38□□□□□ -0.27
Ccdc60-202ENSMUST00000086483 Dhx16G3X8X0 1044 aaKnown RBP13.37□□□□□ -0.27
Ccdc60-202ENSMUST00000086483 Ppp4cP97470 307 aa13.37□□□□□ -0.27
Ccdc60-202ENSMUST00000086483 D630036H23RikQ3UQD6 204 aa13.37□□□□□ -0.27
Ccdc60-202ENSMUST00000086483 Klhdc9Q3USL1 350 aa13.37□□□□□ -0.27
Ccdc60-202ENSMUST00000086483 Cdcp1Q5U462 833 aa13.37□□□□□ -0.27
Ccdc60-202ENSMUST00000086483 Nlrp9aQ66X03 949 aa13.37□□□□□ -0.27
Ccdc60-202ENSMUST00000086483 Ubap2lQ80X50 1107 aaKnown RBP13.37□□□□□ -0.27
Ccdc60-202ENSMUST00000086483 Tbc1d10bQ8BHL3 798 aa13.37□□□□□ -0.27
Ccdc60-202ENSMUST00000086483 Fam102bQ8BQS4 339 aa13.37□□□□□ -0.27
Ccdc60-202ENSMUST00000086483 Myh3P13541 1940 aa13.37□□□□□ -0.27
Ccdc60-202ENSMUST00000086483 ThbdP15306 577 aa13.37□□□□□ -0.27
Ccdc60-202ENSMUST00000086483 Fscn2Q32M02 492 aa13.37□□□□□ -0.27
Ccdc60-202ENSMUST00000086483 Kiaa1211Q5PR69 1207 aa13.37□□□□□ -0.27
Ccdc60-202ENSMUST00000086483 NfkbibQ60778 359 aa13.37□□□□□ -0.27
Ccdc60-202ENSMUST00000086483 Stac3Q8BZ71 360 aa13.37□□□□□ -0.27
Ccdc60-202ENSMUST00000086483 Trib2Q8K4K3 343 aa13.37□□□□□ -0.27
Ccdc60-202ENSMUST00000086483 Rad50P70388 1312 aa13.36□□□□□ -0.27
Ccdc60-202ENSMUST00000086483 Taco1Q8K0Z7 294 aaKnown RBP13.36□□□□□ -0.27
Ccdc60-202ENSMUST00000086483 Vta1Q9CR26 309 aa13.36□□□□□ -0.27
Ccdc60-202ENSMUST00000086483 Pramef17A2ASJ1 475 aa13.35□□□□□ -0.27
Ccdc60-202ENSMUST00000086483 Slc6a20bO88575 635 aa13.35□□□□□ -0.27
Ccdc60-202ENSMUST00000086483 Pa2g4P50580 394 aaKnown RBP13.35□□□□□ -0.27
Ccdc60-202ENSMUST00000086483 Timm10P62073 90 aa13.35□□□□□ -0.27
Ccdc60-202ENSMUST00000086483 Mctp2Q5RJH2 878 aa13.35□□□□□ -0.27
Ccdc60-202ENSMUST00000086483 Ube3cQ80U95 1083 aa13.35□□□□□ -0.27
Ccdc60-202ENSMUST00000086483 Trmt2aQ8BNV1 574 aaKnown RBP13.35□□□□□ -0.27
Ccdc60-202ENSMUST00000086483 Disp2Q8CIP5 1345 aa13.35□□□□□ -0.27
Ccdc60-202ENSMUST00000086483 Tsc2Q61037 1814 aa13.35□□□□□ -0.27
Ccdc60-202ENSMUST00000086483 Zfp957Q3UT76 567 aa13.35□□□□□ -0.27
Ccdc60-202ENSMUST00000086483 Btg1-ps1Q3V0S2 161 aa13.35□□□□□ -0.27
Ccdc60-202ENSMUST00000086483 Btg1-ps2Q3V0X0 161 aa13.35□□□□□ -0.27
Ccdc60-202ENSMUST00000086483 Aldh1l1Q8R0Y6 902 aa13.35□□□□□ -0.27
Ccdc60-202ENSMUST00000086483 Lamb1P02469 1786 aa13.34□□□□□ -0.27
Ccdc60-202ENSMUST00000086483 1700003F12RikA2AKE5 210 aa13.34□□□□□ -0.27
Ccdc60-202ENSMUST00000086483 Prl3d1P18121 224 aa13.34□□□□□ -0.27
Ccdc60-202ENSMUST00000086483 Ncbp1Q3UYV9 790 aaKnown RBP13.34□□□□□ -0.27
Ccdc60-202ENSMUST00000086483 Srrm1Q52KI8 946 aaKnown RBP13.34□□□□□ -0.27
Ccdc60-202ENSMUST00000086483 Ddx4Q61496 702 aa13.34□□□□□ -0.27
Ccdc60-202ENSMUST00000086483 Fxr1Q61584 677 aaKnown RBP13.34□□□□□ -0.27
Ccdc60-202ENSMUST00000086483 Krt40Q6IFX3 439 aa13.34□□□□□ -0.27
Ccdc60-202ENSMUST00000086483 Acot3Q9QYR7 432 aa13.34□□□□□ -0.27
Ccdc60-202ENSMUST00000086483 Eef2P58252 858 aaKnown RBP13.34□□□□□ -0.27
Ccdc60-202ENSMUST00000086483 Slc4a10Q5DTL9 1118 aa13.34□□□□□ -0.27
Ccdc60-202ENSMUST00000086483 Tbc1d23Q8K0F1 684 aa13.34□□□□□ -0.27
Ccdc60-202ENSMUST00000086483 Usp14Q9JMA1 493 aaKnown RBP13.34□□□□□ -0.27
Ccdc60-202ENSMUST00000086483 Tmigd3G3X8R9 209 aa13.33□□□□□ -0.28
Ccdc60-202ENSMUST00000086483 Sema3eP70275 775 aa13.33□□□□□ -0.28
Ccdc60-202ENSMUST00000086483 Esyt2Q3TZZ7 845 aa13.33□□□□□ -0.28
Ccdc60-202ENSMUST00000086483 Pnpla6Q3TRM4 1355 aa13.33□□□□□ -0.28
Ccdc60-202ENSMUST00000086483 Ier5O89113 308 aa13.32□□□□□ -0.28
Ccdc60-202ENSMUST00000086483 Vcam1P29533 739 aa13.32□□□□□ -0.28
Ccdc60-202ENSMUST00000086483 Col6a1Q04857 1025 aa13.32□□□□□ -0.28
Ccdc60-202ENSMUST00000086483 Smim22J3QP37 91 aa13.32□□□□□ -0.28
Ccdc60-202ENSMUST00000086483 AoahO35298 574 aa13.32□□□□□ -0.28
Ccdc60-202ENSMUST00000086483 Parp2O88554 559 aa13.32□□□□□ -0.28
Ccdc60-202ENSMUST00000086483 Hoxc6P10629 235 aa13.32□□□□□ -0.28
Ccdc60-202ENSMUST00000086483 Tmed8Q3UHI4 326 aa13.32□□□□□ -0.28
Ccdc60-202ENSMUST00000086483 Dync1li2Q6PDL0 492 aaKnown RBP13.32□□□□□ -0.28
Ccdc60-202ENSMUST00000086483 Cracr2bQ80ZJ8 394 aa13.32□□□□□ -0.28
Ccdc60-202ENSMUST00000086483 Q8C5S3 137 aa13.32□□□□□ -0.28
Ccdc60-202ENSMUST00000086483 IrgqQ8VIM9 583 aa13.32□□□□□ -0.28
Ccdc60-202ENSMUST00000086483 Ankrd54Q91WK7 299 aa13.32□□□□□ -0.28
Ccdc60-202ENSMUST00000086483 Pidd1Q9ERV7 915 aa13.32□□□□□ -0.28
Ccdc60-202ENSMUST00000086483 Mroh6V9GX81 722 aa13.32□□□□□ -0.28
Ccdc60-202ENSMUST00000086483 Gnai2P08752 355 aaKnown RBP13.31□□□□□ -0.28
Ccdc60-202ENSMUST00000086483 Nme8Q715T0 586 aa13.31□□□□□ -0.28
Ccdc60-202ENSMUST00000086483 Asap2Q7SIG6 958 aa13.31□□□□□ -0.28
Ccdc60-202ENSMUST00000086483 Scfd2Q8BTY8 684 aa13.31□□□□□ -0.28
Ccdc60-202ENSMUST00000086483 Stn1Q8K2X3 378 aa13.31□□□□□ -0.28
Ccdc60-202ENSMUST00000086483 Pqbp1Q91VJ5 263 aaKnown RBP13.31□□□□□ -0.28
Ccdc60-202ENSMUST00000086483 Cndp2Q9D1A2 475 aaKnown RBP13.31□□□□□ -0.28
Ccdc60-202ENSMUST00000086483 Adgra3Q7TT36 1310 aa13.31□□□□□ -0.28
Ccdc60-202ENSMUST00000086483 Col2a1P28481 1487 aa13.31□□□□□ -0.28
Ccdc60-202ENSMUST00000086483 Pnmal2G3X9N3 661 aa13.31□□□□□ -0.28
Ccdc60-202ENSMUST00000086483 Neurod6P48986 337 aa13.31□□□□□ -0.28
Ccdc60-202ENSMUST00000086483 Fgd1P52734 960 aa13.31□□□□□ -0.28
Ccdc60-202ENSMUST00000086483 Fam160b2Q80YR2 744 aa13.31□□□□□ -0.28
Ccdc60-202ENSMUST00000086483 MylipQ8BM54 445 aa13.31□□□□□ -0.28
Ccdc60-202ENSMUST00000086483 Slc4a1P04919 929 aa13.3□□□□□ -0.28
Ccdc60-202ENSMUST00000086483 Ets1P27577 440 aa13.3□□□□□ -0.28
Ccdc60-202ENSMUST00000086483 Entpd3Q8BFW6 529 aa13.3□□□□□ -0.28
Ccdc60-202ENSMUST00000086483 Alpk1Q9CXB8 1231 aa13.3□□□□□ -0.28
Ccdc60-202ENSMUST00000086483 MycP01108 439 aa13.3□□□□□ -0.28
Ccdc60-202ENSMUST00000086483 Lpar1P61793 364 aa13.3□□□□□ -0.28
Ccdc60-202ENSMUST00000086483 Il6stQ00560 917 aa13.3□□□□□ -0.28
Retrieved 100 of 22,080 RNA–protein pairs in 47.1 ms