RNA–Protein interactions for RNA: ENSMUST00000074679.3

Sh3rf2-202, Transcript of Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

TSL 1 (best) BASIC

Gene Sh3rf2, Length 4,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2-202ENSMUST00000074679 LyarQ08288 388 aaKnown RBP8.3□□□□□ -1.08
Sh3rf2-202ENSMUST00000074679 Fam198bQ3UPI1 517 aa8.3□□□□□ -1.08
Sh3rf2-202ENSMUST00000074679 Ppp1r1bQ60829 194 aa8.3□□□□□ -1.08
Sh3rf2-202ENSMUST00000074679 Lamb3Q61087 1168 aa8.3□□□□□ -1.08
Sh3rf2-202ENSMUST00000074679 Hs6st3Q9QYK4 470 aa8.3□□□□□ -1.08
Sh3rf2-202ENSMUST00000074679 Zfyve9A2A8R0 1397 aa8.3□□□□□ -1.08
Sh3rf2-202ENSMUST00000074679 Ccdc172Q810N9 267 aa8.3□□□□□ -1.08
Sh3rf2-202ENSMUST00000074679 U2af1l4Q8BGJ9 220 aa8.3□□□□□ -1.08
Sh3rf2-202ENSMUST00000074679 Ccz1Q8C1Y8 480 aa8.3□□□□□ -1.08
Sh3rf2-202ENSMUST00000074679 Tango6Q8C3S2 1079 aa8.3□□□□□ -1.08
Sh3rf2-202ENSMUST00000074679 Cxcl11Q9JHH5 100 aa8.3□□□□□ -1.08
Sh3rf2-202ENSMUST00000074679 Ubn2Q80WC1 1314 aa8.3□□□□□ -1.08
Sh3rf2-202ENSMUST00000074679 Ctdnep1Q3TP92 244 aa8.3□□□□□ -1.08
Sh3rf2-202ENSMUST00000074679 Snx25Q3ZT31 840 aa8.3□□□□□ -1.08
Sh3rf2-202ENSMUST00000074679 Usp28Q5I043 1051 aa8.3□□□□□ -1.08
Sh3rf2-202ENSMUST00000074679 Trim56Q80VI1 734 aaKnown RBP8.3□□□□□ -1.08
Sh3rf2-202ENSMUST00000074679 Lrrc8aQ80WG5 810 aa8.3□□□□□ -1.08
Sh3rf2-202ENSMUST00000074679 Mb21d2Q8C525 428 aa8.3□□□□□ -1.08
Sh3rf2-202ENSMUST00000074679 Kcnk13Q8R1P5 405 aa8.3□□□□□ -1.08
Sh3rf2-202ENSMUST00000074679 Map3k15A2AQW0 1331 aa8.3□□□□□ -1.08
Sh3rf2-202ENSMUST00000074679 Eef2kO08796 724 aa8.3□□□□□ -1.08
Sh3rf2-202ENSMUST00000074679 Zbtb7aO88939 569 aaKnown RBP8.3□□□□□ -1.08
Sh3rf2-202ENSMUST00000074679 Psd3Q2PFD7 1037 aa8.3□□□□□ -1.08
Sh3rf2-202ENSMUST00000074679 Bag1Q60739 355 aa8.3□□□□□ -1.08
Sh3rf2-202ENSMUST00000074679 Nxf7Q80SZ6 620 aaKnown RBP8.3□□□□□ -1.08
Sh3rf2-202ENSMUST00000074679 Tmco3Q8BH01 678 aa8.3□□□□□ -1.08
Sh3rf2-202ENSMUST00000074679 Slc39a11Q8BWY7 342 aa8.3□□□□□ -1.08
Sh3rf2-202ENSMUST00000074679 Mtmr3Q8K296 1196 aa8.3□□□□□ -1.08
Sh3rf2-202ENSMUST00000074679 Bmp2kQ91Z96 1138 aa8.3□□□□□ -1.08
Sh3rf2-202ENSMUST00000074679 Hps4Q99KG7 671 aa8.3□□□□□ -1.08
Sh3rf2-202ENSMUST00000074679 Rbm33Q9CXK9 1231 aaKnown RBP8.3□□□□□ -1.08
Sh3rf2-202ENSMUST00000074679 Dhx8A2A4P0 1244 aaKnown RBP8.29□□□□□ -1.08
Sh3rf2-202ENSMUST00000074679 Gcom1E9PZ54 550 aa8.29□□□□□ -1.08
Sh3rf2-202ENSMUST00000074679 Apba2P98084 750 aa8.29□□□□□ -1.08
Sh3rf2-202ENSMUST00000074679 MyzapQ3UIJ9 466 aa8.29□□□□□ -1.08
Sh3rf2-202ENSMUST00000074679 Wdr3Q8BHB4 942 aaKnown RBP8.29□□□□□ -1.08
Sh3rf2-202ENSMUST00000074679 Pnpla2Q8BJ56 486 aa8.29□□□□□ -1.08
Sh3rf2-202ENSMUST00000074679 Pold4Q9CWP8 107 aa8.29□□□□□ -1.08
Sh3rf2-202ENSMUST00000074679 Gtf3c6Q9D8P7 227 aa8.29□□□□□ -1.08
Sh3rf2-202ENSMUST00000074679 ErmnQ5EBJ4 281 aa8.29□□□□□ -1.08
Sh3rf2-202ENSMUST00000074679 Prdm1Q60636 856 aa8.29□□□□□ -1.08
Sh3rf2-202ENSMUST00000074679 Znf653Q6YND2 615 aa8.29□□□□□ -1.08
Sh3rf2-202ENSMUST00000074679 Zfp317Q8C0Q5 607 aa8.29□□□□□ -1.08
Sh3rf2-202ENSMUST00000074679 Matr3Q8K310 846 aaKnown RBP8.29□□□□□ -1.08
Sh3rf2-202ENSMUST00000074679 Tmem132aQ922P8 1018 aa8.29□□□□□ -1.08
Sh3rf2-202ENSMUST00000074679 Add2Q9QYB8 725 aa8.29□□□□□ -1.08
Sh3rf2-202ENSMUST00000074679 Tekt3Q6X6Z7 490 aa8.29□□□□□ -1.08
Sh3rf2-202ENSMUST00000074679 Atad2Q8CDM1 1040 aa8.29□□□□□ -1.08
Sh3rf2-202ENSMUST00000074679 Inpp5bQ8K337 993 aa8.29□□□□□ -1.08
Sh3rf2-202ENSMUST00000074679 4931408C20RikE9PWP9 1381 aa8.29□□□□□ -1.08
Sh3rf2-202ENSMUST00000074679 Plekhg2Q6KAU7 1340 aa8.28□□□□□ -1.08
Sh3rf2-202ENSMUST00000074679 Large2Q5XPT3 690 aa8.28□□□□□ -1.08
Sh3rf2-202ENSMUST00000074679 Ddx31Q6NZQ2 687 aaKnown RBP8.28□□□□□ -1.08
Sh3rf2-202ENSMUST00000074679 Cnksr2Q80YA9 1032 aa8.28□□□□□ -1.08
Sh3rf2-202ENSMUST00000074679 9230110C19RikQ8CC70 267 aa8.28□□□□□ -1.08
Sh3rf2-202ENSMUST00000074679 Dnaaf4Q8R368 420 aa8.28□□□□□ -1.08
Sh3rf2-202ENSMUST00000074679 Lrrc2Q8VDB8 371 aa8.28□□□□□ -1.08
Sh3rf2-202ENSMUST00000074679 Xpo4Q9ESJ0 1151 aa8.28□□□□□ -1.08
Sh3rf2-202ENSMUST00000074679 Aox4Q3TYQ9 1336 aa8.28□□□□□ -1.08
Sh3rf2-202ENSMUST00000074679 Znhit6Q3UFB2 460 aaKnown RBP8.28□□□□□ -1.08
Sh3rf2-202ENSMUST00000074679 Tom1l2Q5SRX1 507 aa8.28□□□□□ -1.08
Sh3rf2-202ENSMUST00000074679 Map3k12Q60700 888 aa8.28□□□□□ -1.08
Sh3rf2-202ENSMUST00000074679 Stn1Q8K2X3 378 aa8.28□□□□□ -1.08
Sh3rf2-202ENSMUST00000074679 Cd248Q91V98 765 aa8.28□□□□□ -1.08
Sh3rf2-202ENSMUST00000074679 IcoslgQ9JHJ8 322 aa8.28□□□□□ -1.08
Sh3rf2-202ENSMUST00000074679 Cetn2Q9R1K9 172 aa8.28□□□□□ -1.08
Sh3rf2-202ENSMUST00000074679 Usp42B2RQC2 1324 aaKnown RBP8.28□□□□□ -1.08
Sh3rf2-202ENSMUST00000074679 Atp8b3Q6UQ17 1335 aa8.28□□□□□ -1.08
Sh3rf2-202ENSMUST00000074679 Usp5P56399 858 aaKnown RBP8.28□□□□□ -1.08
Sh3rf2-202ENSMUST00000074679 Ces5aQ6AW46 575 aa8.28□□□□□ -1.08
Sh3rf2-202ENSMUST00000074679 Sept9Q80UG5 583 aa8.28□□□□□ -1.08
Sh3rf2-202ENSMUST00000074679 Tmem179Q8BHH9 233 aa8.28□□□□□ -1.08
Sh3rf2-202ENSMUST00000074679 Q8BZJ8 459 aa8.28□□□□□ -1.08
Sh3rf2-202ENSMUST00000074679 Zkscan5Q9Z1D8 819 aa8.28□□□□□ -1.08
Sh3rf2-202ENSMUST00000074679 Eif6O55135 245 aa8.28□□□□□ -1.08
Sh3rf2-202ENSMUST00000074679 Actn3O88990 900 aaKnown RBP8.28□□□□□ -1.08
Sh3rf2-202ENSMUST00000074679 Gng11P61953 73 aa8.28□□□□□ -1.08
Sh3rf2-202ENSMUST00000074679 Spata18Q0P557 537 aa8.28□□□□□ -1.08
Sh3rf2-202ENSMUST00000074679 1810065E05RikQ5NC41 235 aa8.28□□□□□ -1.08
Sh3rf2-202ENSMUST00000074679 Ankrd40Q5SUE8 363 aa8.28□□□□□ -1.08
Sh3rf2-202ENSMUST00000074679 AsnsQ61024 561 aa8.28□□□□□ -1.08
Sh3rf2-202ENSMUST00000074679 Cep120Q7TSG1 988 aa8.28□□□□□ -1.08
Sh3rf2-202ENSMUST00000074679 SdsQ8VBT2 327 aa8.28□□□□□ -1.08
Sh3rf2-202ENSMUST00000074679 Pdcd6ipQ9WU78 869 aaKnown RBP8.28□□□□□ -1.08
Sh3rf2-202ENSMUST00000074679 Clip2Q9Z0H8 1047 aa8.28□□□□□ -1.08
Sh3rf2-202ENSMUST00000074679 Cfap70D3YVL2 1141 aa8.27□□□□□ -1.09
Sh3rf2-202ENSMUST00000074679 Clec11aO88200 328 aa8.27□□□□□ -1.09
Sh3rf2-202ENSMUST00000074679 Slc27a3O88561 667 aa8.27□□□□□ -1.09
Sh3rf2-202ENSMUST00000074679 Calm1P0DP26 149 aaKnown RBP8.27□□□□□ -1.09
Sh3rf2-202ENSMUST00000074679 Calm2P0DP27 149 aaKnown RBP8.27□□□□□ -1.09
Sh3rf2-202ENSMUST00000074679 Calm3P0DP28 149 aaKnown RBP8.27□□□□□ -1.09
Sh3rf2-202ENSMUST00000074679 Psmb7P70195 277 aa8.27□□□□□ -1.09
Sh3rf2-202ENSMUST00000074679 PcQ05920 1178 aa8.27□□□□□ -1.09
Sh3rf2-202ENSMUST00000074679 Brd2Q7JJ13 798 aaKnown RBP8.27□□□□□ -1.09
Sh3rf2-202ENSMUST00000074679 Atxn2lQ7TQH0 1049 aaKnown RBP8.27□□□□□ -1.09
Sh3rf2-202ENSMUST00000074679 Skida1Q80YR3 822 aa8.27□□□□□ -1.09
Sh3rf2-202ENSMUST00000074679 Slc13a4Q8BZ82 625 aa8.27□□□□□ -1.09
Sh3rf2-202ENSMUST00000074679 Ttc27Q8CD92 847 aa8.27□□□□□ -1.09
Sh3rf2-202ENSMUST00000074679 Taf12Q8VE65 161 aa8.27□□□□□ -1.09
Sh3rf2-202ENSMUST00000074679 Aox1O54754 1333 aa8.27□□□□□ -1.09
Retrieved 100 of 22,080 RNA–protein pairs in 27.8 ms