RNA–Protein interactions for RNA: ENSMUST00000070487.11

Cpsf4-201, Transcript of Cleavage and polyadenylation specificity factor subunit 4, mousemouse

TSL 1 (best) BASIC

Gene Cpsf4, Length 1,606 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4-201ENSMUST00000070487 Col11a1Q61245 1804 aa29.22■■■□□ 2.27
Cpsf4-201ENSMUST00000070487 Cfap99A0A140LIX9 648 aa29.22■■■□□ 2.27
Cpsf4-201ENSMUST00000070487 Garem2Q6PAJ3 880 aa29.22■■■□□ 2.27
Cpsf4-201ENSMUST00000070487 Eaf2Q91ZD6 262 aa29.22■■■□□ 2.27
Cpsf4-201ENSMUST00000070487 Atoh1P48985 351 aa29.21■■■□□ 2.27
Cpsf4-201ENSMUST00000070487 Spryd7Q3TFQ1 196 aa29.21■■■□□ 2.27
Cpsf4-201ENSMUST00000070487 Aak1Q3UHJ0 959 aa29.21■■■□□ 2.27
Cpsf4-201ENSMUST00000070487 Znf287Q9EQB9 759 aa29.21■■■□□ 2.27
Cpsf4-201ENSMUST00000070487 Qrich1Q3UA37 777 aa29.2■■■□□ 2.27
Cpsf4-201ENSMUST00000070487 Kank4Q6P9J5 1016 aa29.2■■■□□ 2.27
Cpsf4-201ENSMUST00000070487 Ubxn10Q8BG34 277 aa29.2■■■□□ 2.27
Cpsf4-201ENSMUST00000070487 Bap1Q99PU7 728 aa29.2■■■□□ 2.27
Cpsf4-201ENSMUST00000070487 Ltbp2O08999 1813 aa29.2■■■□□ 2.27
Cpsf4-201ENSMUST00000070487 A0A1W2P6Q8 802 aa29.2■■■□□ 2.26
Cpsf4-201ENSMUST00000070487 Gm9048A0A1W2P7H4 802 aa29.2■■■□□ 2.26
Cpsf4-201ENSMUST00000070487 A0A1W2P7Z8 802 aa29.2■■■□□ 2.26
Cpsf4-201ENSMUST00000070487 Gm9046A0A1W2P855 802 aa29.2■■■□□ 2.26
Cpsf4-201ENSMUST00000070487 Prpmp5E9PXN1 296 aa29.2■■■□□ 2.26
Cpsf4-201ENSMUST00000070487 Ythdc1E9Q5K9 736 aaKnown RBP29.2■■■□□ 2.26
Cpsf4-201ENSMUST00000070487 Usp17ldG5E8G2 545 aa29.2■■■□□ 2.26
Cpsf4-201ENSMUST00000070487 Usp17lcG5E8I7 545 aa29.2■■■□□ 2.26
Cpsf4-201ENSMUST00000070487 Pde11aP0C1Q2 933 aa29.2■■■□□ 2.26
Cpsf4-201ENSMUST00000070487 Acap3Q6NXL5 833 aa29.2■■■□□ 2.26
Cpsf4-201ENSMUST00000070487 Ndufv1Q91YT0 464 aa29.2■■■□□ 2.26
Cpsf4-201ENSMUST00000070487 Tnni2P13412 182 aa29.19■■■□□ 2.26
Cpsf4-201ENSMUST00000070487 Mybl2P48972 704 aa29.19■■■□□ 2.26
Cpsf4-201ENSMUST00000070487 Cep131Q62036 1060 aa29.19■■■□□ 2.26
Cpsf4-201ENSMUST00000070487 Htatsf1Q8BGC0 757 aa29.19■■■□□ 2.26
Cpsf4-201ENSMUST00000070487 Rbm28Q8CGC6 750 aaKnown RBP29.19■■■□□ 2.26
Cpsf4-201ENSMUST00000070487 Sirt2Q8VDQ8 389 aa29.19■■■□□ 2.26
Cpsf4-201ENSMUST00000070487 Klrc1Q9Z202 244 aa29.19■■■□□ 2.26
Cpsf4-201ENSMUST00000070487 Myh14Q6URW6 2000 aa29.19■■■□□ 2.26
Cpsf4-201ENSMUST00000070487 Frmpd4A2AFR3 1320 aa29.18■■■□□ 2.26
Cpsf4-201ENSMUST00000070487 Usp31E9Q6Y8 1344 aa29.18■■■□□ 2.26
Cpsf4-201ENSMUST00000070487 Cbx2P30658 519 aa29.18■■■□□ 2.26
Cpsf4-201ENSMUST00000070487 Traf5P70191 558 aa29.18■■■□□ 2.26
Cpsf4-201ENSMUST00000070487 Otud5Q3U2S4 566 aa29.18■■■□□ 2.26
Cpsf4-201ENSMUST00000070487 Cnksr2Q80YA9 1032 aa29.18■■■□□ 2.26
Cpsf4-201ENSMUST00000070487 Rfc4Q99J62 364 aa29.18■■■□□ 2.26
Cpsf4-201ENSMUST00000070487 Rnf181Q9CY62 165 aa29.18■■■□□ 2.26
Cpsf4-201ENSMUST00000070487 Cd3dP04235 173 aa29.17■■■□□ 2.26
Cpsf4-201ENSMUST00000070487 Q3TYL0 343 aa29.17■■■□□ 2.26
Cpsf4-201ENSMUST00000070487 Sv2cQ69ZS6 727 aa29.17■■■□□ 2.26
Cpsf4-201ENSMUST00000070487 Trex1Q91XB0 314 aa29.17■■■□□ 2.26
Cpsf4-201ENSMUST00000070487 Slc34a2Q9DBP0 697 aa29.17■■■□□ 2.26
Cpsf4-201ENSMUST00000070487 PtpraP18052 829 aa29.16■■■□□ 2.26
Cpsf4-201ENSMUST00000070487 MyrflQ3UN70 904 aa29.16■■■□□ 2.26
Cpsf4-201ENSMUST00000070487 Hand2Q61039 217 aa29.16■■■□□ 2.26
Cpsf4-201ENSMUST00000070487 Btn2a2A4QPC6 514 aa29.16■■■□□ 2.26
Cpsf4-201ENSMUST00000070487 Has3O08650 554 aa29.16■■■□□ 2.26
Cpsf4-201ENSMUST00000070487 Evi5P97366 809 aa29.16■■■□□ 2.26
Cpsf4-201ENSMUST00000070487 4930567H17RikQ3V0K5 233 aa29.16■■■□□ 2.26
Cpsf4-201ENSMUST00000070487 Brip1Q5SXJ3 1174 aa29.16■■■□□ 2.26
Cpsf4-201ENSMUST00000070487 Ifit2Q64112 472 aa29.16■■■□□ 2.26
Cpsf4-201ENSMUST00000070487 Scfd2Q8BTY8 684 aa29.16■■■□□ 2.26
Cpsf4-201ENSMUST00000070487 Podxl2Q8CAE9 603 aa29.16■■■□□ 2.26
Cpsf4-201ENSMUST00000070487 ImmtQ8CAQ8 757 aaKnown RBP29.16■■■□□ 2.26
Cpsf4-201ENSMUST00000070487 Gm44503E9PYU5 387 aa29.15■■■□□ 2.26
Cpsf4-201ENSMUST00000070487 Slc1a4O35874 532 aa29.15■■■□□ 2.26
Cpsf4-201ENSMUST00000070487 Ube2oQ6ZPJ3 1288 aa29.15■■■□□ 2.26
Cpsf4-201ENSMUST00000070487 Inpp5bQ8K337 993 aa29.15■■■□□ 2.26
Cpsf4-201ENSMUST00000070487 Dnaaf4Q8R368 420 aa29.15■■■□□ 2.26
Cpsf4-201ENSMUST00000070487 Snap47Q8R570 413 aa29.15■■■□□ 2.26
Cpsf4-201ENSMUST00000070487 Fbxo33Q8VE08 562 aa29.15■■■□□ 2.26
Cpsf4-201ENSMUST00000070487 Pmfbp1Q9WVQ0 1022 aa29.15■■■□□ 2.26
Cpsf4-201ENSMUST00000070487 Bub1bQ9Z1S0 1052 aa29.15■■■□□ 2.26
Cpsf4-201ENSMUST00000070487 Ppp1r1bQ60829 194 aa29.14■■■□□ 2.26
Cpsf4-201ENSMUST00000070487 Wdr43Q6ZQL4 677 aaKnown RBP29.14■■■□□ 2.26
Cpsf4-201ENSMUST00000070487 Ift74Q8BKE9 600 aa29.14■■■□□ 2.26
Cpsf4-201ENSMUST00000070487 Usp44Q8C2S0 711 aa29.14■■■□□ 2.26
Cpsf4-201ENSMUST00000070487 Vmn1r199Q8R280 367 aa29.14■■■□□ 2.26
Cpsf4-201ENSMUST00000070487 Ercc3P49135 783 aa29.13■■■□□ 2.25
Cpsf4-201ENSMUST00000070487 Otop3Q80UF9 577 aa29.13■■■□□ 2.25
Cpsf4-201ENSMUST00000070487 Dpp8Q80YA7 892 aa29.13■■■□□ 2.25
Cpsf4-201ENSMUST00000070487 Rnf41Q8BH75 317 aa29.13■■■□□ 2.25
Cpsf4-201ENSMUST00000070487 Efcc1Q9JJF6 558 aa29.13■■■□□ 2.25
Cpsf4-201ENSMUST00000070487 Ak2Q9WTP6 239 aa29.13■■■□□ 2.25
Cpsf4-201ENSMUST00000070487 FAM186AQ9D9R9 1790 aa29.13■■■□□ 2.25
Cpsf4-201ENSMUST00000070487 Rbm8a2A0A0N4SUH6 174 aa29.12■■■□□ 2.25
Cpsf4-201ENSMUST00000070487 Prl7a2O54831 253 aa29.12■■■□□ 2.25
Cpsf4-201ENSMUST00000070487 Adamts19P59509 1210 aa29.12■■■□□ 2.25
Cpsf4-201ENSMUST00000070487 Eya3P97480 510 aa29.12■■■□□ 2.25
Cpsf4-201ENSMUST00000070487 Arl14Q3SXC5 192 aa29.12■■■□□ 2.25
Cpsf4-201ENSMUST00000070487 Trmt1Q3TX08 663 aa29.12■■■□□ 2.25
Cpsf4-201ENSMUST00000070487 Rbm8aQ9CWZ3 174 aa29.12■■■□□ 2.25
Cpsf4-201ENSMUST00000070487 Plcg1Q62077 1302 aa29.12■■■□□ 2.25
Cpsf4-201ENSMUST00000070487 Spty2d1Q68FG3 682 aa29.11■■■□□ 2.25
Cpsf4-201ENSMUST00000070487 Rassf8Q8CJ96 419 aa29.11■■■□□ 2.25
Cpsf4-201ENSMUST00000070487 SmapQ9R0P4 181 aaKnown RBP29.11■■■□□ 2.25
Cpsf4-201ENSMUST00000070487 Btbd19S4R1I0 287 aa29.11■■■□□ 2.25
Cpsf4-201ENSMUST00000070487 Gm36210A0A1B0GS00 229 aa29.1■■■□□ 2.25
Cpsf4-201ENSMUST00000070487 Casp12O08736 419 aa29.1■■■□□ 2.25
Cpsf4-201ENSMUST00000070487 Sept2P42208 361 aaKnown RBP29.1■■■□□ 2.25
Cpsf4-201ENSMUST00000070487 Dcaf15Q6PFH3 600 aa29.1■■■□□ 2.25
Cpsf4-201ENSMUST00000070487 Adam39Q7M762 756 aa29.1■■■□□ 2.25
Cpsf4-201ENSMUST00000070487 Shisa4Q8CA71 197 aa29.1■■■□□ 2.25
Cpsf4-201ENSMUST00000070487 Nup133Q8R0G9 1155 aa29.1■■■□□ 2.25
Cpsf4-201ENSMUST00000070487 Cnot6lQ8VEG6 555 aa29.1■■■□□ 2.25
Cpsf4-201ENSMUST00000070487 Mlh1Q9JK91 760 aa29.1■■■□□ 2.25
Cpsf4-201ENSMUST00000070487 Prr14lE9Q7C4 1971 aa29.09■■■□□ 2.25
Retrieved 100 of 22,080 RNA–protein pairs in 274.2 ms