RNA–Protein interactions for RNA: ENSMUST00000057438.6

Vcpip1-201, Transcript of Deubiquitinating protein VCIP135, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vcpip1, Length 9,749 nt, Biotype protein coding, Subcellular localisation Nucleus, Pseudopodium .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1-201ENSMUST00000057438 Atp6v1aP50516 617 aaKnown RBP13.75□□□□□ -0.21
Vcpip1-201ENSMUST00000057438 Ddx41Q91VN6 622 aaKnown RBP13.75□□□□□ -0.21
Vcpip1-201ENSMUST00000057438 Ttc14Q9CSP9 761 aa13.75□□□□□ -0.21
Vcpip1-201ENSMUST00000057438 Ptpn14Q62130 1189 aa13.75□□□□□ -0.21
Vcpip1-201ENSMUST00000057438 Cep152A2AUM9 1736 aaKnown RBP13.75□□□□□ -0.21
Vcpip1-201ENSMUST00000057438 Rbbp5Q8BX09 538 aaKnown RBP13.75□□□□□ -0.21
Vcpip1-201ENSMUST00000057438 Pcdhb22Q91XZ8 794 aa13.75□□□□□ -0.21
Vcpip1-201ENSMUST00000057438 Rps6ka2Q9WUT3 733 aa13.75□□□□□ -0.21
Vcpip1-201ENSMUST00000057438 Pja2Q80U04 707 aa13.75□□□□□ -0.21
Vcpip1-201ENSMUST00000057438 Usp35M0QWN7 1009 aa13.74□□□□□ -0.21
Vcpip1-201ENSMUST00000057438 Tmed1Q3V009 227 aa13.74□□□□□ -0.21
Vcpip1-201ENSMUST00000057438 Kif2bQ8C0N1 668 aa13.74□□□□□ -0.21
Vcpip1-201ENSMUST00000057438 C130026I21RikQ8C898 291 aa13.74□□□□□ -0.21
Vcpip1-201ENSMUST00000057438 Sde2Q8K1J5 448 aaKnown RBP13.74□□□□□ -0.21
Vcpip1-201ENSMUST00000057438 Taf12Q8VE65 161 aa13.74□□□□□ -0.21
Vcpip1-201ENSMUST00000057438 Xab2Q9DCD2 855 aaKnown RBP13.74□□□□□ -0.21
Vcpip1-201ENSMUST00000057438 Zkscan16A2ALW2 728 aa13.74□□□□□ -0.21
Vcpip1-201ENSMUST00000057438 ChkbO55229 394 aa13.74□□□□□ -0.21
Vcpip1-201ENSMUST00000057438 Suds3Q8BR65 328 aa13.74□□□□□ -0.21
Vcpip1-201ENSMUST00000057438 Acot11Q8VHQ9 594 aa13.74□□□□□ -0.21
Vcpip1-201ENSMUST00000057438 Edc4Q3UJB9 1406 aaKnown RBP13.74□□□□□ -0.21
Vcpip1-201ENSMUST00000057438 Anks6Q6GQX6 883 aa13.74□□□□□ -0.21
Vcpip1-201ENSMUST00000057438 Bank1Q80VH0 783 aa13.74□□□□□ -0.21
Vcpip1-201ENSMUST00000057438 Tceanc2Q8R2M0 207 aa13.74□□□□□ -0.21
Vcpip1-201ENSMUST00000057438 Slc26a7Q8R2Z3 656 aa13.74□□□□□ -0.21
Vcpip1-201ENSMUST00000057438 Fancd2Q80V62 1450 aa13.74□□□□□ -0.21
Vcpip1-201ENSMUST00000057438 Ubash3aQ3V3E1 624 aa13.74□□□□□ -0.21
Vcpip1-201ENSMUST00000057438 Ccdc125Q5U465 500 aa13.74□□□□□ -0.21
Vcpip1-201ENSMUST00000057438 Trim37Q6PCX9 961 aa13.74□□□□□ -0.21
Vcpip1-201ENSMUST00000057438 Q8BZJ8 459 aa13.74□□□□□ -0.21
Vcpip1-201ENSMUST00000057438 Cd274Q9EP73 290 aa13.74□□□□□ -0.21
Vcpip1-201ENSMUST00000057438 Adcy10Q8C0T9 1614 aa13.74□□□□□ -0.21
Vcpip1-201ENSMUST00000057438 Trappc8E9PWG2 1437 aa13.74□□□□□ -0.21
Vcpip1-201ENSMUST00000057438 Rnf168Q80XJ2 565 aa13.74□□□□□ -0.21
Vcpip1-201ENSMUST00000057438 Morc4Q8BMD7 928 aa13.74□□□□□ -0.21
Vcpip1-201ENSMUST00000057438 Myl6bQ8CI43 207 aa13.74□□□□□ -0.21
Vcpip1-201ENSMUST00000057438 Pus7B7ZNL8 666 aaKnown RBP13.73□□□□□ -0.21
Vcpip1-201ENSMUST00000057438 Parp1P11103 1013 aaKnown RBP13.73□□□□□ -0.21
Vcpip1-201ENSMUST00000057438 YwhaeP62259 255 aaKnown RBP13.73□□□□□ -0.21
Vcpip1-201ENSMUST00000057438 Acnat2Q8BGG9 420 aa13.73□□□□□ -0.21
Vcpip1-201ENSMUST00000057438 Lrrc9Q8CDN9 1456 aa13.73□□□□□ -0.21
Vcpip1-201ENSMUST00000057438 Rab11fip4Q8BQP8 635 aa13.73□□□□□ -0.21
Vcpip1-201ENSMUST00000057438 Trerf1Q8BXJ2 1205 aa13.73□□□□□ -0.21
Vcpip1-201ENSMUST00000057438 Hgh1Q8C3I8 393 aa13.73□□□□□ -0.21
Vcpip1-201ENSMUST00000057438 Gm6121L7MUF1 212 aa13.73□□□□□ -0.21
Vcpip1-201ENSMUST00000057438 Kiaa1024Q8K3V7 917 aa13.73□□□□□ -0.21
Vcpip1-201ENSMUST00000057438 Ptgs1P22437 602 aa13.73□□□□□ -0.21
Vcpip1-201ENSMUST00000057438 AdpgkQ8VDL4 496 aa13.73□□□□□ -0.21
Vcpip1-201ENSMUST00000057438 Mdm2P23804 489 aa13.73□□□□□ -0.21
Vcpip1-201ENSMUST00000057438 Surf6P70279 355 aaKnown RBP13.73□□□□□ -0.21
Vcpip1-201ENSMUST00000057438 Tmx1Q8VBT0 278 aa13.73□□□□□ -0.21
Vcpip1-201ENSMUST00000057438 Rilpl1Q9JJC6 406 aa13.73□□□□□ -0.21
Vcpip1-201ENSMUST00000057438 Psma7Q9Z2U0 248 aa13.73□□□□□ -0.21
Vcpip1-201ENSMUST00000057438 Fgd5Q80UZ0 1219 aa13.73□□□□□ -0.21
Vcpip1-201ENSMUST00000057438 Ctnna1P26231 906 aaKnown RBP13.72□□□□□ -0.21
Vcpip1-201ENSMUST00000057438 Rabep2Q91WG2 554 aa13.72□□□□□ -0.21
Vcpip1-201ENSMUST00000057438 Ubn2Q80WC1 1314 aa13.72□□□□□ -0.21
Vcpip1-201ENSMUST00000057438 Satb1Q60611 764 aa13.72□□□□□ -0.21
Vcpip1-201ENSMUST00000057438 SnrkQ8VDU5 748 aa13.72□□□□□ -0.21
Vcpip1-201ENSMUST00000057438 Efcab2Q9CQ46 164 aa13.72□□□□□ -0.21
Vcpip1-201ENSMUST00000057438 Nsd3Q6P2L6 1439 aa13.72□□□□□ -0.21
Vcpip1-201ENSMUST00000057438 Slc12a2P55012 1205 aa13.72□□□□□ -0.21
Vcpip1-201ENSMUST00000057438 Pbrm1Q8BSQ9 1634 aaKnown RBP13.72□□□□□ -0.21
Vcpip1-201ENSMUST00000057438 Ythdc2B2RR83 1445 aaKnown RBP13.72□□□□□ -0.21
Vcpip1-201ENSMUST00000057438 Cnot10Q8BH15 744 aa13.72□□□□□ -0.21
Vcpip1-201ENSMUST00000057438 Ccdc68Q8BVC4 333 aa13.72□□□□□ -0.21
Vcpip1-201ENSMUST00000057438 Ankrd50F7BE84 1390 aa13.72□□□□□ -0.21
Vcpip1-201ENSMUST00000057438 CaluO35887 315 aa13.72□□□□□ -0.21
Vcpip1-201ENSMUST00000057438 FanccP50652 591 aa13.72□□□□□ -0.21
Vcpip1-201ENSMUST00000057438 Cog7Q3UM29 770 aa13.72□□□□□ -0.21
Vcpip1-201ENSMUST00000057438 LgsnQ8CIX8 563 aa13.72□□□□□ -0.21
Vcpip1-201ENSMUST00000057438 Farp2Q91VS8 1065 aa13.72□□□□□ -0.21
Vcpip1-201ENSMUST00000057438 Trim42Q9D2H5 723 aa13.72□□□□□ -0.21
Vcpip1-201ENSMUST00000057438 Zscan25B2RX31 543 aa13.72□□□□□ -0.21
Vcpip1-201ENSMUST00000057438 Kifc2O08672 792 aa13.72□□□□□ -0.21
Vcpip1-201ENSMUST00000057438 Abtb2Q7TQI7 1024 aa13.72□□□□□ -0.21
Vcpip1-201ENSMUST00000057438 Morc2aQ69ZX6 1030 aa13.72□□□□□ -0.21
Vcpip1-201ENSMUST00000057438 Smc6Q924W5 1097 aa13.72□□□□□ -0.21
Vcpip1-201ENSMUST00000057438 Zfp781Q0P5U5 243 aa13.71□□□□□ -0.21
Vcpip1-201ENSMUST00000057438 Spc25Q3UA16 226 aa13.71□□□□□ -0.21
Vcpip1-201ENSMUST00000057438 Azi2Q9QYP6 405 aa13.71□□□□□ -0.21
Vcpip1-201ENSMUST00000057438 SdsQ8VBT2 327 aa13.71□□□□□ -0.21
Vcpip1-201ENSMUST00000057438 Gdpd2Q9ESM6 539 aa13.71□□□□□ -0.21
Vcpip1-201ENSMUST00000057438 Frmpd1A2AKB4 1549 aa13.71□□□□□ -0.21
Vcpip1-201ENSMUST00000057438 ErmnQ5EBJ4 281 aa13.71□□□□□ -0.21
Vcpip1-201ENSMUST00000057438 Krt14Q61781 484 aa13.71□□□□□ -0.21
Vcpip1-201ENSMUST00000057438 Stac3Q8BZ71 360 aa13.71□□□□□ -0.21
Vcpip1-201ENSMUST00000057438 Iws1Q8C1D8 766 aa13.71□□□□□ -0.21
Vcpip1-201ENSMUST00000057438 Ophn1Q99J31 802 aa13.71□□□□□ -0.21
Vcpip1-201ENSMUST00000057438 Amotl2Q8K371 772 aa13.71□□□□□ -0.21
Vcpip1-201ENSMUST00000057438 PtprkP35822 1457 aa13.71□□□□□ -0.21
Vcpip1-201ENSMUST00000057438 Wdr62Q3U3T8 1523 aa13.71□□□□□ -0.21
Vcpip1-201ENSMUST00000057438 Gm28043E0CXC2 719 aa13.71□□□□□ -0.21
Vcpip1-201ENSMUST00000057438 Apol11aE9PZG0 334 aa13.71□□□□□ -0.21
Vcpip1-201ENSMUST00000057438 Rtel1Q0VGM9 1203 aa13.71□□□□□ -0.21
Vcpip1-201ENSMUST00000057438 Rbm12b2Q66JV4 834 aaKnown RBP13.71□□□□□ -0.21
Vcpip1-201ENSMUST00000057438 Tnpo2Q99LG2 887 aaKnown RBP13.71□□□□□ -0.21
Vcpip1-201ENSMUST00000057438 Ccdc70Q9D9B0 223 aa13.71□□□□□ -0.21
Vcpip1-201ENSMUST00000057438 Sh3tc1G3X9F6 1346 aa13.71□□□□□ -0.21
Vcpip1-201ENSMUST00000057438 1700018F24RikB2RW27 314 aa13.71□□□□□ -0.21
Retrieved 100 of 22,080 RNA–protein pairs in 38.6 ms