RNA–Protein interactions for RNA: ENSMUST00000031628.9

Ptcd1-201, Transcript of Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptcd1, Length 3,087 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1-201ENSMUST00000031628 WtapQ9ER69 396 aa12.2□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Myo1cQ9WTI7 1063 aa12.2□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Gm11983V9GXS8 105 aa12.2□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 CpdO89001 1377 aa12.2□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Sipa1l3G3X9J0 1776 aa12.2□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Speer4dL7N216 212 aa12.2□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Serpinb6bO08804 377 aa12.2□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 PnnO35691 725 aaKnown RBP12.2□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Cyp24a1Q64441 514 aa12.2□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Rtn1Q8K0T0 780 aa12.2□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Otud6bQ8K2H2 294 aa12.2□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Telo2Q9DC40 840 aaKnown RBP12.2□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Ubn2Q80WC1 1314 aa12.2□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 TbcaP48428 108 aaKnown RBP12.19□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Cdkl5Q3UTQ8 938 aa12.19□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Abtb2Q7TQI7 1024 aa12.19□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Slc39a11Q8BWY7 342 aa12.19□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Ubac1Q8VDI7 409 aa12.19□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Lrp6O88572 1613 aa12.19□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Setdb1O88974 1307 aa12.19□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Ssc5dQ8BV57 1371 aa12.19□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Gm4340L7N2C4 268 aa12.19□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Mapkapk5O54992 473 aa12.19□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Snrpa1P57784 255 aaKnown RBP12.19□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Plekhf1Q3TB82 279 aa12.19□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Plbd2Q3TCN2 594 aa12.19□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Klra4Q60651 263 aa12.19□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Trim25Q61510 634 aaKnown RBP12.19□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Krt39Q6IFX4 482 aa12.19□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Kri1Q8VDQ9 704 aaKnown RBP12.19□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 CenpqQ9CPQ5 267 aa12.19□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Abca3Q8R420 1704 aa12.19□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Rsph10bE9PYQ0 876 aa12.19□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Nmt2O70311 529 aa12.19□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Eif5P59325 429 aaKnown RBP12.19□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Anks1aP59672 1150 aa12.19□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Pde4dQ01063 747 aa12.19□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 HelbQ6NVF4 1074 aa12.19□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Dusp9Q7TNL7 452 aa12.19□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Necab1Q8BG18 352 aa12.19□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Eno4Q8C042 619 aa12.19□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 GdaQ9R111 454 aa12.19□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Med23Q80YQ2 1367 aa12.18□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 A0A1Y7VML8 143 aa12.18□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Ddb1Q3U1J4 1140 aaKnown RBP12.18□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Vps37dQ810I0 261 aa12.18□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Q8VDP2 222 aa12.18□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Tab2Q99K90 693 aa12.18□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 SufuQ9Z0P7 484 aa12.18□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Hspa1lP16627 641 aa12.18□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Spata5Q3UMC0 893 aaKnown RBP12.18□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Drc7Q6V3W6 876 aa12.18□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Abcb6Q9DC29 842 aa12.18□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Rgs12Q8CGE9 1381 aa12.18□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Col3a1P08121 1464 aa12.18□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Dennd3A2RT67 1274 aa12.17□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Atp8b5A3FIN4 1183 aa12.17□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Gm5624F6ZZG8 207 aa12.17□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Bnip3O55003 187 aa12.17□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Pde11aP0C1Q2 933 aa12.17□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Paxbp1P58501 919 aa12.17□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Cdcp1Q5U462 833 aa12.17□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Klhl30Q8C3F7 581 aa12.17□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Cep89Q9CZX2 791 aa12.17□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Ccdc39Q9D5Y1 937 aa12.17□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Cnpy3Q9DAU1 276 aa12.17□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 MetP16056 1379 aa12.17□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Surf1P09925 306 aa12.17□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Nap1l1P28656 391 aaKnown RBP12.17□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Siah1aP61092 282 aa12.17□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Fam83bQ0VBM2 1012 aa12.17□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Dpf2Q61103 391 aaKnown RBP12.17□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Vps18Q8R307 973 aa12.17□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Ndufb9Q9CQJ8 179 aa12.17□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Hip1rQ9JKY5 1068 aa12.17□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Hic2Q9JLZ6 619 aaKnown RBP12.17□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 NagaQ9QWR8 415 aa12.17□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Myh7Q91Z83 1935 aa12.17□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Cyp2j7A0A140T8U1 504 aa12.17□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Hap1O35668 628 aa12.17□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Wnt7aP24383 349 aa12.17□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Vps33bP59016 617 aa12.17□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Slitrk3Q810B9 980 aa12.17□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Tcp11l1Q8BTG3 509 aa12.17□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Spata32Q8C5V0 334 aa12.17□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Anapc4Q91W96 807 aa12.17□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Krtap5-3Q9D226 196 aa12.17□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Desi2Q9D291 194 aa12.17□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 FliiQ9JJ28 1271 aa12.17□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Phldb3E9QAF4 648 aa12.16□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 CltaO08585 235 aa12.16□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Sdc2P43407 202 aa12.16□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Arhgef16Q3U5C8 713 aa12.16□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Cyp4x1Q6A152 507 aa12.16□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Terb1Q8C0V1 768 aa12.16□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Trim11Q99PQ2 467 aa12.16□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 PdiltQ9DAN1 588 aa12.16□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Stk39Q9Z1W9 556 aa12.16□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Casp12O08736 419 aa12.16□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Eva1cP58659 440 aa12.16□□□□□ -0.46
Retrieved 100 of 22,080 RNA–protein pairs in 25.2 ms