RNA–Protein interactions for RNA: ENSMUST00000029549.15

Tpm3-201, Transcript of Tropomyosin alpha-3 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm3, Length 2,230 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm3-201ENSMUST00000029549 Ccdc39Q9D5Y1 937 aa16.77■□□□□ 0.28
Tpm3-201ENSMUST00000029549 Acot9Q9R0X4 439 aaKnown RBP16.77■□□□□ 0.28
Tpm3-201ENSMUST00000029549 Prr16A3KMN5 304 aa16.77■□□□□ 0.27
Tpm3-201ENSMUST00000029549 Hmgb2P30681 210 aaKnown RBP16.77■□□□□ 0.27
Tpm3-201ENSMUST00000029549 Bend4P86174 541 aa16.77■□□□□ 0.27
Tpm3-201ENSMUST00000029549 Uba5Q8VE47 403 aa16.77■□□□□ 0.27
Tpm3-201ENSMUST00000029549 St5Q924W7 1134 aa16.77■□□□□ 0.27
Tpm3-201ENSMUST00000029549 NenfQ9CQ45 171 aa16.77■□□□□ 0.27
Tpm3-201ENSMUST00000029549 Psd3Q2PFD7 1037 aa16.76■□□□□ 0.27
Tpm3-201ENSMUST00000029549 Cep131Q62036 1060 aa16.76■□□□□ 0.27
Tpm3-201ENSMUST00000029549 Ttll4Q80UG8 1193 aa16.76■□□□□ 0.27
Tpm3-201ENSMUST00000029549 Tmem179Q8BHH9 233 aa16.76■□□□□ 0.27
Tpm3-201ENSMUST00000029549 Nop2Q922K7 793 aaKnown RBP16.76■□□□□ 0.27
Tpm3-201ENSMUST00000029549 NesQ6P5H2 1864 aaKnown RBP16.76■□□□□ 0.27
Tpm3-201ENSMUST00000029549 Zscan20B2KFW1 1030 aa16.76■□□□□ 0.27
Tpm3-201ENSMUST00000029549 Tmed8Q3UHI4 326 aa16.76■□□□□ 0.27
Tpm3-201ENSMUST00000029549 Mindy4Q3UQI9 744 aa16.76■□□□□ 0.27
Tpm3-201ENSMUST00000029549 Kif1bpQ6ZPU9 617 aa16.76■□□□□ 0.27
Tpm3-201ENSMUST00000029549 Kcnj14Q8JZN3 434 aa16.76■□□□□ 0.27
Tpm3-201ENSMUST00000029549 Cep89Q9CZX2 791 aa16.76■□□□□ 0.27
Tpm3-201ENSMUST00000029549 Epb41l3Q9WV92 929 aa16.76■□□□□ 0.27
Tpm3-201ENSMUST00000029549 Gm3893E9Q1I1 302 aa16.75■□□□□ 0.27
Tpm3-201ENSMUST00000029549 Ampd3O08739 766 aa16.75■□□□□ 0.27
Tpm3-201ENSMUST00000029549 TbcaP48428 108 aaKnown RBP16.75■□□□□ 0.27
Tpm3-201ENSMUST00000029549 Gja5Q01231 358 aa16.75■□□□□ 0.27
Tpm3-201ENSMUST00000029549 Mum1l1Q4VA55 681 aa16.75■□□□□ 0.27
Tpm3-201ENSMUST00000029549 Zfp202Q8C879 641 aa16.75■□□□□ 0.27
Tpm3-201ENSMUST00000029549 Q8K2W9 541 aa16.75■□□□□ 0.27
Tpm3-201ENSMUST00000029549 UvssaQ9D479 717 aa16.75■□□□□ 0.27
Tpm3-201ENSMUST00000029549 Eif4enif1Q9EST3 983 aaKnown RBP16.75■□□□□ 0.27
Tpm3-201ENSMUST00000029549 Calm1P0DP26 149 aaKnown RBP16.74■□□□□ 0.27
Tpm3-201ENSMUST00000029549 Calm2P0DP27 149 aaKnown RBP16.74■□□□□ 0.27
Tpm3-201ENSMUST00000029549 Calm3P0DP28 149 aaKnown RBP16.74■□□□□ 0.27
Tpm3-201ENSMUST00000029549 Pfkfb1P70266 471 aa16.74■□□□□ 0.27
Tpm3-201ENSMUST00000029549 Dock5B2RY04 1868 aa16.74■□□□□ 0.27
Tpm3-201ENSMUST00000029549 Slc1a4O35874 532 aa16.74■□□□□ 0.27
Tpm3-201ENSMUST00000029549 CebpaP53566 359 aa16.74■□□□□ 0.27
Tpm3-201ENSMUST00000029549 Gas1Q01721 343 aa16.74■□□□□ 0.27
Tpm3-201ENSMUST00000029549 Traf3ip1Q149C2 625 aa16.74■□□□□ 0.27
Tpm3-201ENSMUST00000029549 Pcdhb14Q6PB90 796 aa16.74■□□□□ 0.27
Tpm3-201ENSMUST00000029549 Mtcl1Q3UHU5 1945 aa16.74■□□□□ 0.27
Tpm3-201ENSMUST00000029549 Atp6v0a2P15920 856 aa16.73■□□□□ 0.27
Tpm3-201ENSMUST00000029549 Tmtc2Q56A06 836 aa16.73■□□□□ 0.27
Tpm3-201ENSMUST00000029549 Slc27a1Q60714 646 aa16.73■□□□□ 0.27
Tpm3-201ENSMUST00000029549 Tsen34Q8BMZ5 316 aa16.73■□□□□ 0.27
Tpm3-201ENSMUST00000029549 Atp2b1G5E829 1220 aa16.73■□□□□ 0.27
Tpm3-201ENSMUST00000029549 Rad23bP54728 416 aa16.73■□□□□ 0.27
Tpm3-201ENSMUST00000029549 Tbc1d31Q6NXY1 996 aa16.73■□□□□ 0.27
Tpm3-201ENSMUST00000029549 Oxsr1Q6P9R2 527 aa16.73■□□□□ 0.27
Tpm3-201ENSMUST00000029549 Rbm28Q8CGC6 750 aaKnown RBP16.73■□□□□ 0.27
Tpm3-201ENSMUST00000029549 Prpf3Q922U1 683 aaKnown RBP16.73■□□□□ 0.27
Tpm3-201ENSMUST00000029549 Rbm6S4R1W5 1118 aaKnown RBP16.73■□□□□ 0.27
Tpm3-201ENSMUST00000029549 Cyp3a25O09158 503 aa16.72■□□□□ 0.27
Tpm3-201ENSMUST00000029549 Tpm3P21107 285 aaKnown RBP16.72■□□□□ 0.27
Tpm3-201ENSMUST00000029549 Tcp11l1Q8BTG3 509 aa16.72■□□□□ 0.27
Tpm3-201ENSMUST00000029549 Pnma3Q8JZW8 466 aa16.72■□□□□ 0.27
Tpm3-201ENSMUST00000029549 Nop14Q8R3N1 860 aaKnown RBP16.72■□□□□ 0.27
Tpm3-201ENSMUST00000029549 Trim11Q99PQ2 467 aa16.72■□□□□ 0.27
Tpm3-201ENSMUST00000029549 Pik3ap1Q9EQ32 811 aa16.72■□□□□ 0.27
Tpm3-201ENSMUST00000029549 Rec8Q8C5S7 591 aa16.72■□□□□ 0.27
Tpm3-201ENSMUST00000029549 Gtf2a1Q99PM3 378 aa16.72■□□□□ 0.27
Tpm3-201ENSMUST00000029549 Trmt44Q9D2Q2 713 aa16.72■□□□□ 0.27
Tpm3-201ENSMUST00000029549 Etnk1Q9D4V0 363 aa16.72■□□□□ 0.27
Tpm3-201ENSMUST00000029549 Prdm11A2AGX3 565 aa16.71■□□□□ 0.27
Tpm3-201ENSMUST00000029549 Nmt2O70311 529 aa16.71■□□□□ 0.27
Tpm3-201ENSMUST00000029549 Ppp4cP97470 307 aa16.71■□□□□ 0.27
Tpm3-201ENSMUST00000029549 Ppm1fQ8CGA0 452 aa16.71■□□□□ 0.27
Tpm3-201ENSMUST00000029549 Stn1Q8K2X3 378 aa16.71■□□□□ 0.27
Tpm3-201ENSMUST00000029549 Tspyl4Q8VD63 406 aa16.71■□□□□ 0.27
Tpm3-201ENSMUST00000029549 Ythdc1E9Q5K9 736 aaKnown RBP16.7■□□□□ 0.26
Tpm3-201ENSMUST00000029549 Epb41l2O70318 988 aaKnown RBP16.7■□□□□ 0.26
Tpm3-201ENSMUST00000029549 Q8C6G1 249 aa16.7■□□□□ 0.26
Tpm3-201ENSMUST00000029549 Golph3lQ8R088 285 aaKnown RBP16.7■□□□□ 0.26
Tpm3-201ENSMUST00000029549 Ubac1Q8VDI7 409 aa16.7■□□□□ 0.26
Tpm3-201ENSMUST00000029549 Znf638Q61464 1960 aaKnown RBP16.7■□□□□ 0.26
Tpm3-201ENSMUST00000029549 Tpd52l1O54818 204 aa16.7■□□□□ 0.26
Tpm3-201ENSMUST00000029549 Myo1bP46735 1107 aa16.7■□□□□ 0.26
Tpm3-201ENSMUST00000029549 Rpusd2Q149F1 553 aa16.7■□□□□ 0.26
Tpm3-201ENSMUST00000029549 Fam89aQ14BJ1 175 aa16.7■□□□□ 0.26
Tpm3-201ENSMUST00000029549 Dhx40Q6PE54 779 aaKnown RBP16.7■□□□□ 0.26
Tpm3-201ENSMUST00000029549 Q8BZJ8 459 aa16.7■□□□□ 0.26
Tpm3-201ENSMUST00000029549 Nup133Q8R0G9 1155 aa16.7■□□□□ 0.26
Tpm3-201ENSMUST00000029549 Tob2Q9JM55 345 aa16.7■□□□□ 0.26
Tpm3-201ENSMUST00000029549 Stxbp4Q9WV89 557 aa16.7■□□□□ 0.26
Tpm3-201ENSMUST00000029549 EgfrQ01279 1210 aa16.69■□□□□ 0.26
Tpm3-201ENSMUST00000029549 Ubxn2bQ0KL01 331 aa16.69■□□□□ 0.26
Tpm3-201ENSMUST00000029549 Fxr1Q61584 677 aaKnown RBP16.69■□□□□ 0.26
Tpm3-201ENSMUST00000029549 Haus7Q8BKT8 364 aa16.69■□□□□ 0.26
Tpm3-201ENSMUST00000029549 Slc51aQ8R000 340 aa16.69■□□□□ 0.26
Tpm3-201ENSMUST00000029549 Tfcp2Q9ERA0 502 aa16.69■□□□□ 0.26
Tpm3-201ENSMUST00000029549 A0A1Y7VML8 143 aa16.69■□□□□ 0.26
Tpm3-201ENSMUST00000029549 Myl3P09542 204 aa16.69■□□□□ 0.26
Tpm3-201ENSMUST00000029549 XpcP51612 930 aa16.69■□□□□ 0.26
Tpm3-201ENSMUST00000029549 Arhgef16Q3U5C8 713 aa16.69■□□□□ 0.26
Tpm3-201ENSMUST00000029549 Cyp7b1Q60991 507 aa16.69■□□□□ 0.26
Tpm3-201ENSMUST00000029549 Syt10Q9R0N4 523 aa16.69■□□□□ 0.26
Tpm3-201ENSMUST00000029549 Chd5A2A8L1 1946 aa16.68■□□□□ 0.26
Tpm3-201ENSMUST00000029549 Ano3A2AHL1 981 aa16.68■□□□□ 0.26
Tpm3-201ENSMUST00000029549 Cavin1O54724 392 aa16.68■□□□□ 0.26
Tpm3-201ENSMUST00000029549 Dapk3O54784 448 aa16.68■□□□□ 0.26
Retrieved 100 of 22,080 RNA–protein pairs in 38.7 ms