RNA–Protein interactions for RNA: ENSMUST00000029414.11

Ssr3-201, Transcript of Translocon-associated protein subunit gamma, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ssr3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr3-201ENSMUST00000029414 D630036H23RikQ3UQD6 204 aa9.59□□□□□ -0.87
Ssr3-201ENSMUST00000029414 Ncbp1Q3UYV9 790 aaKnown RBP9.59□□□□□ -0.87
Ssr3-201ENSMUST00000029414 Mum1l1Q4VA55 681 aa9.59□□□□□ -0.87
Ssr3-201ENSMUST00000029414 Lmod1Q8BVA4 595 aa9.59□□□□□ -0.87
Ssr3-201ENSMUST00000029414 Gpsm2Q8VDU0 679 aa9.59□□□□□ -0.87
Ssr3-201ENSMUST00000029414 Tjap1Q9DCD5 539 aa9.59□□□□□ -0.87
Ssr3-201ENSMUST00000029414 Gm44503E9PYU5 387 aa9.59□□□□□ -0.87
Ssr3-201ENSMUST00000029414 FlgP11088 336 aa9.59□□□□□ -0.87
Ssr3-201ENSMUST00000029414 CtshP49935 333 aa9.59□□□□□ -0.87
Ssr3-201ENSMUST00000029414 Sv2cQ69ZS6 727 aa9.59□□□□□ -0.87
Ssr3-201ENSMUST00000029414 H2-Q4Q8HWB2 354 aa9.59□□□□□ -0.87
Ssr3-201ENSMUST00000029414 Dnaaf4Q8R368 420 aa9.59□□□□□ -0.87
Ssr3-201ENSMUST00000029414 Cluap1Q8R3P7 413 aa9.59□□□□□ -0.87
Ssr3-201ENSMUST00000029414 CsadQ9DBE0 493 aa9.59□□□□□ -0.87
Ssr3-201ENSMUST00000029414 Ralgps2Q9ERD6 590 aa9.59□□□□□ -0.87
Ssr3-201ENSMUST00000029414 Rfpl4bJ3QPR6 266 aa9.58□□□□□ -0.88
Ssr3-201ENSMUST00000029414 Ccnd3P30282 292 aa9.58□□□□□ -0.88
Ssr3-201ENSMUST00000029414 Ncf1Q09014 390 aa9.58□□□□□ -0.88
Ssr3-201ENSMUST00000029414 Pramel6Q810Y9 485 aa9.58□□□□□ -0.88
Ssr3-201ENSMUST00000029414 Slc45a1Q8BIV7 751 aa9.58□□□□□ -0.88
Ssr3-201ENSMUST00000029414 Syt5Q9R0N5 386 aa9.58□□□□□ -0.88
Ssr3-201ENSMUST00000029414 Usp31E9Q6Y8 1344 aa9.58□□□□□ -0.88
Ssr3-201ENSMUST00000029414 ChgaP26339 463 aaKnown RBP9.58□□□□□ -0.88
Ssr3-201ENSMUST00000029414 Map2k1P31938 393 aa9.58□□□□□ -0.88
Ssr3-201ENSMUST00000029414 NpeppsQ11011 920 aa9.58□□□□□ -0.88
Ssr3-201ENSMUST00000029414 Gtf2a1Q99PM3 378 aa9.58□□□□□ -0.88
Ssr3-201ENSMUST00000029414 Il1rapl2Q9ERS6 686 aa9.58□□□□□ -0.88
Ssr3-201ENSMUST00000029414 Frmd7A2AD83 703 aa9.57□□□□□ -0.88
Ssr3-201ENSMUST00000029414 Fam178bQ24JP3 464 aa9.57□□□□□ -0.88
Ssr3-201ENSMUST00000029414 Usp33Q8R5K2 909 aa9.57□□□□□ -0.88
Ssr3-201ENSMUST00000029414 TicrrQ8BQ33 1889 aa9.57□□□□□ -0.88
Ssr3-201ENSMUST00000029414 Ldlrad1D3YYZ1 218 aa9.57□□□□□ -0.88
Ssr3-201ENSMUST00000029414 DaxxO35613 739 aa9.57□□□□□ -0.88
Ssr3-201ENSMUST00000029414 Erc2Q6PH08 957 aa9.57□□□□□ -0.88
Ssr3-201ENSMUST00000029414 Rlbp1Q9Z275 317 aa9.57□□□□□ -0.88
Ssr3-201ENSMUST00000029414 Prss40A6H6T1 365 aa9.57□□□□□ -0.88
Ssr3-201ENSMUST00000029414 Tnni2P13412 182 aa9.57□□□□□ -0.88
Ssr3-201ENSMUST00000029414 NefhP19246 1090 aa9.57□□□□□ -0.88
Ssr3-201ENSMUST00000029414 Dcaf15Q6PFH3 600 aa9.57□□□□□ -0.88
Ssr3-201ENSMUST00000029414 KhnynQ80U38 671 aa9.57□□□□□ -0.88
Ssr3-201ENSMUST00000029414 Rhot2Q8JZN7 620 aa9.57□□□□□ -0.88
Ssr3-201ENSMUST00000029414 Rai14Q9EP71 979 aaKnown RBP9.57□□□□□ -0.88
Ssr3-201ENSMUST00000029414 Fam186bD3Z420 943 aa9.56□□□□□ -0.88
Ssr3-201ENSMUST00000029414 ThbdP15306 577 aa9.56□□□□□ -0.88
Ssr3-201ENSMUST00000029414 Eps15P42567 897 aa9.56□□□□□ -0.88
Ssr3-201ENSMUST00000029414 Slc16a10Q3U9N9 512 aa9.56□□□□□ -0.88
Ssr3-201ENSMUST00000029414 Prkrip1Q9CWV6 186 aaKnown RBP9.56□□□□□ -0.88
Ssr3-201ENSMUST00000029414 Ak7Q9D2H2 614 aa9.56□□□□□ -0.88
Ssr3-201ENSMUST00000029414 Cd2apQ9JLQ0 637 aa9.56□□□□□ -0.88
Ssr3-201ENSMUST00000029414 Acot3Q9QYR7 432 aa9.56□□□□□ -0.88
Ssr3-201ENSMUST00000029414 Tbc1d8bA3KGB4 1114 aa9.56□□□□□ -0.88
Ssr3-201ENSMUST00000029414 Pus7B7ZNL8 666 aaKnown RBP9.56□□□□□ -0.88
Ssr3-201ENSMUST00000029414 Ly6dP35459 127 aa9.56□□□□□ -0.88
Ssr3-201ENSMUST00000029414 Tex2Q6ZPJ0 1128 aaKnown RBP9.56□□□□□ -0.88
Ssr3-201ENSMUST00000029414 Itm2cQ91VK4 269 aa9.56□□□□□ -0.88
Ssr3-201ENSMUST00000029414 4933402E13RikQ9D4D2 429 aa9.56□□□□□ -0.88
Ssr3-201ENSMUST00000029414 PhipQ8VDD9 1821 aaKnown RBP9.55□□□□□ -0.88
Ssr3-201ENSMUST00000029414 Lamp1P11438 406 aaKnown RBP9.55□□□□□ -0.88
Ssr3-201ENSMUST00000029414 Cyp2d9P11714 504 aa9.55□□□□□ -0.88
Ssr3-201ENSMUST00000029414 Prpf38aQ4FK66 312 aaKnown RBP9.55□□□□□ -0.88
Ssr3-201ENSMUST00000029414 Specc1Q5SXY1 1067 aa9.55□□□□□ -0.88
Ssr3-201ENSMUST00000029414 Fam196bQ6GQV1 535 aa9.55□□□□□ -0.88
Ssr3-201ENSMUST00000029414 Aldh8a1Q8BH00 487 aa9.55□□□□□ -0.88
Ssr3-201ENSMUST00000029414 Sp8Q8BMJ8 486 aa9.55□□□□□ -0.88
Ssr3-201ENSMUST00000029414 Nek9Q8K1R7 984 aa9.55□□□□□ -0.88
Ssr3-201ENSMUST00000029414 Apbb1ipQ8R5A3 670 aa9.55□□□□□ -0.88
Ssr3-201ENSMUST00000029414 Pold4Q9CWP8 107 aa9.55□□□□□ -0.88
Ssr3-201ENSMUST00000029414 Ubxn11Q9D572 484 aa9.55□□□□□ -0.88
Ssr3-201ENSMUST00000029414 Mms22lB1AUR6 1238 aa9.55□□□□□ -0.88
Ssr3-201ENSMUST00000029414 B020004C17RikJ3QP07 232 aa9.55□□□□□ -0.88
Ssr3-201ENSMUST00000029414 Bnip3O55003 187 aa9.55□□□□□ -0.88
Ssr3-201ENSMUST00000029414 Cyp2b10P12791 500 aa9.55□□□□□ -0.88
Ssr3-201ENSMUST00000029414 Sema3eP70275 775 aa9.55□□□□□ -0.88
Ssr3-201ENSMUST00000029414 Wwc1Q5SXA9 1104 aa9.55□□□□□ -0.88
Ssr3-201ENSMUST00000029414 Ppp1r11Q8K1L5 131 aa9.55□□□□□ -0.88
Ssr3-201ENSMUST00000029414 Col26a1Q91VF6 440 aa9.55□□□□□ -0.88
Ssr3-201ENSMUST00000029414 Clul1Q3ZRW6 464 aa9.54□□□□□ -0.88
Ssr3-201ENSMUST00000029414 Ube2oQ6ZPJ3 1288 aa9.54□□□□□ -0.88
Ssr3-201ENSMUST00000029414 Wdr43Q6ZQL4 677 aaKnown RBP9.54□□□□□ -0.88
Ssr3-201ENSMUST00000029414 Appbp2Q9DAX9 585 aa9.54□□□□□ -0.88
Ssr3-201ENSMUST00000029414 Add2Q9QYB8 725 aa9.54□□□□□ -0.88
Ssr3-201ENSMUST00000029414 Pdlim7Q3TJD7 457 aa9.54□□□□□ -0.88
Ssr3-201ENSMUST00000029414 Ppp1r26Q6A025 1163 aa9.54□□□□□ -0.88
Ssr3-201ENSMUST00000029414 Scfd2Q8BTY8 684 aa9.54□□□□□ -0.88
Ssr3-201ENSMUST00000029414 MlphQ91V27 590 aa9.54□□□□□ -0.88
Ssr3-201ENSMUST00000029414 Mov10l1Q99MV5 1187 aa9.54□□□□□ -0.88
Ssr3-201ENSMUST00000029414 Dhx30Q99PU8 1217 aaKnown RBP9.54□□□□□ -0.88
Ssr3-201ENSMUST00000029414 Styxl1Q9DAR2 321 aa9.54□□□□□ -0.88
Ssr3-201ENSMUST00000029414 Cyp46a1Q9WVK8 500 aa9.54□□□□□ -0.88
Ssr3-201ENSMUST00000029414 Hoxa7P02830 229 aa9.54□□□□□ -0.88
Ssr3-201ENSMUST00000029414 Il7P10168 154 aa9.54□□□□□ -0.88
Ssr3-201ENSMUST00000029414 Irf5P56477 497 aa9.54□□□□□ -0.88
Ssr3-201ENSMUST00000029414 Qrich1Q3UA37 777 aa9.54□□□□□ -0.88
Ssr3-201ENSMUST00000029414 Olfm4Q3UZZ4 505 aa9.54□□□□□ -0.88
Ssr3-201ENSMUST00000029414 Ddx11Q6AXC6 880 aa9.54□□□□□ -0.88
Ssr3-201ENSMUST00000029414 Rbm28Q8CGC6 750 aaKnown RBP9.54□□□□□ -0.88
Ssr3-201ENSMUST00000029414 Trex1Q91XB0 314 aa9.54□□□□□ -0.88
Ssr3-201ENSMUST00000029414 HibadhQ99L13 335 aaKnown RBP9.54□□□□□ -0.88
Ssr3-201ENSMUST00000029414 Ngly1Q9JI78 651 aa9.54□□□□□ -0.88
Ssr3-201ENSMUST00000029414 Bcar3Q9QZK2 820 aa9.54□□□□□ -0.88
Retrieved 100 of 22,080 RNA–protein pairs in 14.5 ms