RNA–Protein interactions for RNA: ENSMUST00000027367.13

Ctdsp1-201, Transcript of Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctdsp1, Length 2,876 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdsp1-201ENSMUST00000027367 Pla2g12bQ99P27 195 aa23.25■■□□□ 1.31
Ctdsp1-201ENSMUST00000027367 Ccdc39Q9D5Y1 937 aa23.25■■□□□ 1.31
Ctdsp1-201ENSMUST00000027367 Mmel1Q9JLI3 765 aa23.25■■□□□ 1.31
Ctdsp1-201ENSMUST00000027367 Slfn1Q9Z0I7 337 aa23.25■■□□□ 1.31
Ctdsp1-201ENSMUST00000027367 Aox4Q3TYQ9 1336 aa23.25■■□□□ 1.31
Ctdsp1-201ENSMUST00000027367 Rrp1P56183 494 aaKnown RBP23.25■■□□□ 1.31
Ctdsp1-201ENSMUST00000027367 Cypt2Q6P924 180 aa23.25■■□□□ 1.31
Ctdsp1-201ENSMUST00000027367 Gm973E9Q295 1059 aa23.24■■□□□ 1.31
Ctdsp1-201ENSMUST00000027367 Nucb2P81117 420 aa23.24■■□□□ 1.31
Ctdsp1-201ENSMUST00000027367 PcQ05920 1178 aa23.24■■□□□ 1.31
Ctdsp1-201ENSMUST00000027367 BbxQ8VBW5 907 aa23.24■■□□□ 1.31
Ctdsp1-201ENSMUST00000027367 Dusp10Q9ESS0 483 aa23.24■■□□□ 1.31
Ctdsp1-201ENSMUST00000027367 Pnpla6Q3TRM4 1355 aa23.24■■□□□ 1.31
Ctdsp1-201ENSMUST00000027367 Epha2Q03145 977 aa23.24■■□□□ 1.31
Ctdsp1-201ENSMUST00000027367 Sugp2Q8CH09 1067 aa23.24■■□□□ 1.31
Ctdsp1-201ENSMUST00000027367 Sumf1Q8R0F3 372 aa23.24■■□□□ 1.31
Ctdsp1-201ENSMUST00000027367 Clec11aO88200 328 aa23.23■■□□□ 1.31
Ctdsp1-201ENSMUST00000027367 Strip1Q8C079 837 aa23.23■■□□□ 1.31
Ctdsp1-201ENSMUST00000027367 Ubxn4Q8VCH8 506 aa23.23■■□□□ 1.31
Ctdsp1-201ENSMUST00000027367 Tcof1O08784 1320 aaKnown RBP23.23■■□□□ 1.31
Ctdsp1-201ENSMUST00000027367 Ica1lQ3TY65 431 aa23.23■■□□□ 1.31
Ctdsp1-201ENSMUST00000027367 Ccdc51Q3URS9 406 aa23.23■■□□□ 1.31
Ctdsp1-201ENSMUST00000027367 Ddx41Q91VN6 622 aaKnown RBP23.23■■□□□ 1.31
Ctdsp1-201ENSMUST00000027367 Ccdc96Q9CR92 584 aa23.23■■□□□ 1.31
Ctdsp1-201ENSMUST00000027367 Ly75Q60767 1723 aa23.23■■□□□ 1.31
Ctdsp1-201ENSMUST00000027367 Spg7Q3ULF4 781 aa23.22■■□□□ 1.31
Ctdsp1-201ENSMUST00000027367 Mum1l1Q4VA55 681 aa23.22■■□□□ 1.31
Ctdsp1-201ENSMUST00000027367 Vps37dQ810I0 261 aa23.22■■□□□ 1.31
Ctdsp1-201ENSMUST00000027367 Kcnj14Q8JZN3 434 aa23.22■■□□□ 1.31
Ctdsp1-201ENSMUST00000027367 Cfap157Q0VFX2 523 aa23.21■■□□□ 1.31
Ctdsp1-201ENSMUST00000027367 CpzQ8R4V4 654 aa23.21■■□□□ 1.31
Ctdsp1-201ENSMUST00000027367 Uba5Q8VE47 403 aa23.21■■□□□ 1.31
Ctdsp1-201ENSMUST00000027367 Adck5Q80V03 582 aa23.21■■□□□ 1.31
Ctdsp1-201ENSMUST00000027367 Pus7lQ8CE46 702 aa23.21■■□□□ 1.31
Ctdsp1-201ENSMUST00000027367 Mrpl12Q9DB15 201 aaKnown RBP23.21■■□□□ 1.31
Ctdsp1-201ENSMUST00000027367 TbcaP48428 108 aaKnown RBP23.2■■□□□ 1.3
Ctdsp1-201ENSMUST00000027367 QarsQ8BML9 775 aa23.2■■□□□ 1.3
Ctdsp1-201ENSMUST00000027367 Wasf1Q8R5H6 559 aa23.2■■□□□ 1.3
Ctdsp1-201ENSMUST00000027367 4930548H24RikQ9D496 437 aa23.2■■□□□ 1.3
Ctdsp1-201ENSMUST00000027367 Stk39Q9Z1W9 556 aa23.2■■□□□ 1.3
Ctdsp1-201ENSMUST00000027367 Gm43638A0A0J9YU36 694 aa23.19■■□□□ 1.3
Ctdsp1-201ENSMUST00000027367 Prr16A3KMN5 304 aa23.19■■□□□ 1.3
Ctdsp1-201ENSMUST00000027367 Mei1Q9D4I2 1268 aa23.19■■□□□ 1.3
Ctdsp1-201ENSMUST00000027367 Acot9Q9R0X4 439 aaKnown RBP23.19■■□□□ 1.3
Ctdsp1-201ENSMUST00000027367 Dock5B2RY04 1868 aa23.19■■□□□ 1.3
Ctdsp1-201ENSMUST00000027367 Esyt2Q3TZZ7 845 aa23.19■■□□□ 1.3
Ctdsp1-201ENSMUST00000027367 Ttll4Q80UG8 1193 aa23.19■■□□□ 1.3
Ctdsp1-201ENSMUST00000027367 Evc2Q8K1G2 1220 aa23.19■■□□□ 1.3
Ctdsp1-201ENSMUST00000027367 Tshz1Q5DTH5 1084 aa23.19■■□□□ 1.3
Ctdsp1-201ENSMUST00000027367 Tbc1d5Q80XQ2 815 aa23.19■■□□□ 1.3
Ctdsp1-201ENSMUST00000027367 Ube2q2Q8K2Z8 378 aa23.19■■□□□ 1.3
Ctdsp1-201ENSMUST00000027367 AatfQ9JKX4 526 aaKnown RBP23.19■■□□□ 1.3
Ctdsp1-201ENSMUST00000027367 Epb41l3Q9WV92 929 aa23.19■■□□□ 1.3
Ctdsp1-201ENSMUST00000027367 Psd3Q2PFD7 1037 aa23.18■■□□□ 1.3
Ctdsp1-201ENSMUST00000027367 St5Q924W7 1134 aa23.18■■□□□ 1.3
Ctdsp1-201ENSMUST00000027367 Cep89Q9CZX2 791 aa23.18■■□□□ 1.3
Ctdsp1-201ENSMUST00000027367 Pik3ap1Q9EQ32 811 aa23.18■■□□□ 1.3
Ctdsp1-201ENSMUST00000027367 Ess2O70279 479 aa23.18■■□□□ 1.3
Ctdsp1-201ENSMUST00000027367 Nmt2O70311 529 aa23.18■■□□□ 1.3
Ctdsp1-201ENSMUST00000027367 NenfQ9CQ45 171 aa23.18■■□□□ 1.3
Ctdsp1-201ENSMUST00000027367 Tbc1d8bA3KGB4 1114 aa23.17■■□□□ 1.3
Ctdsp1-201ENSMUST00000027367 Stx1aO35526 288 aa23.17■■□□□ 1.3
Ctdsp1-201ENSMUST00000027367 Cdkn1cP49919 348 aa23.17■■□□□ 1.3
Ctdsp1-201ENSMUST00000027367 Tmem179Q8BHH9 233 aa23.17■■□□□ 1.3
Ctdsp1-201ENSMUST00000027367 Gm3893E9Q1I1 302 aa23.17■■□□□ 1.3
Ctdsp1-201ENSMUST00000027367 Irx2P81066 474 aa23.17■■□□□ 1.3
Ctdsp1-201ENSMUST00000027367 Etnk1Q9D4V0 363 aa23.17■■□□□ 1.3
Ctdsp1-201ENSMUST00000027367 Tulp1Q9Z273 543 aa23.17■■□□□ 1.3
Ctdsp1-201ENSMUST00000027367 Pfkfb1P70266 471 aa23.16■■□□□ 1.3
Ctdsp1-201ENSMUST00000027367 Pim2Q62070 370 aa23.16■■□□□ 1.3
Ctdsp1-201ENSMUST00000027367 Zkscan5Q9Z1D8 819 aa23.16■■□□□ 1.3
Ctdsp1-201ENSMUST00000027367 Snapc4Q8BP86 1333 aa23.16■■□□□ 1.3
Ctdsp1-201ENSMUST00000027367 Atp2b1G5E829 1220 aa23.16■■□□□ 1.3
Ctdsp1-201ENSMUST00000027367 Col20a1Q923P0 1320 aa23.16■■□□□ 1.3
Ctdsp1-201ENSMUST00000027367 Myl3P09542 204 aa23.15■■□□□ 1.3
Ctdsp1-201ENSMUST00000027367 Kif22Q3V300 660 aa23.15■■□□□ 1.3
Ctdsp1-201ENSMUST00000027367 Taf3Q5HZG4 932 aa23.15■■□□□ 1.3
Ctdsp1-201ENSMUST00000027367 Kcnf1Q7TSH7 493 aa23.15■■□□□ 1.3
Ctdsp1-201ENSMUST00000027367 Nol7Q9D7Z3 254 aaKnown RBP23.15■■□□□ 1.3
Ctdsp1-201ENSMUST00000027367 Zscan20B2KFW1 1030 aa23.15■■□□□ 1.3
Ctdsp1-201ENSMUST00000027367 1810065E05RikQ5NC41 235 aa23.15■■□□□ 1.3
Ctdsp1-201ENSMUST00000027367 Fnbp4Q6ZQ03 1031 aa23.15■■□□□ 1.3
Ctdsp1-201ENSMUST00000027367 RbsnQ80Y56 783 aa23.15■■□□□ 1.3
Ctdsp1-201ENSMUST00000027367 Zfp202Q8C879 641 aa23.15■■□□□ 1.3
Ctdsp1-201ENSMUST00000027367 Ubac1Q8VDI7 409 aa23.15■■□□□ 1.3
Ctdsp1-201ENSMUST00000027367 Clstn1Q9EPL2 979 aa23.15■■□□□ 1.3
Ctdsp1-201ENSMUST00000027367 Hmgn5Q9JL35 406 aa23.15■■□□□ 1.3
Ctdsp1-201ENSMUST00000027367 Chd5A2A8L1 1946 aa23.15■■□□□ 1.3
Ctdsp1-201ENSMUST00000027367 Pcdhb14Q6PB90 796 aa23.15■■□□□ 1.3
Ctdsp1-201ENSMUST00000027367 Ulbp1Q8HWA3 334 aa23.15■■□□□ 1.3
Ctdsp1-201ENSMUST00000027367 Nop2Q922K7 793 aaKnown RBP23.15■■□□□ 1.3
Ctdsp1-201ENSMUST00000027367 1700017N19RikA0A087WPJ1 469 aa23.14■■□□□ 1.29
Ctdsp1-201ENSMUST00000027367 Gm36210A0A1B0GS00 229 aa23.14■■□□□ 1.29
Ctdsp1-201ENSMUST00000027367 MeiocA2AG06 965 aa23.14■■□□□ 1.29
Ctdsp1-201ENSMUST00000027367 Cspp1B2RX88 1205 aa23.14■■□□□ 1.29
Ctdsp1-201ENSMUST00000027367 Slc1a4O35874 532 aa23.14■■□□□ 1.29
Ctdsp1-201ENSMUST00000027367 Atp6v0a2P15920 856 aa23.14■■□□□ 1.29
Ctdsp1-201ENSMUST00000027367 Bend4P86174 541 aa23.14■■□□□ 1.29
Ctdsp1-201ENSMUST00000027367 Vars2Q3U2A8 1060 aa23.14■■□□□ 1.29
Ctdsp1-201ENSMUST00000027367 Tsen34Q8BMZ5 316 aa23.14■■□□□ 1.29
Retrieved 100 of 22,080 RNA–protein pairs in 13.9 ms