RNA–Protein interactions for RNA: ENST00000641991.1

CASC19-272, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 1,360 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-272ENST00000641991 FCGBPQ9Y6R7 5405 aaPredicted RBP4.42□□□□□ -1.7
CASC19-272ENST00000641991 KRTAP12-3P60328 96 aa4.32□□□□□ -1.72
CASC19-272ENST00000641991 KRTAP19-5Q3LI72 72 aa4.32□□□□□ -1.72
CASC19-272ENST00000641991 KRTAP19-7Q3SYF9 63 aa4.29□□□□□ -1.72
CASC19-272ENST00000641991 KRTAP9-7A8MTY7 169 aa4.23□□□□□ -1.73
CASC19-272ENST00000641991 MT1EP04732 61 aa4.22□□□□□ -1.73
CASC19-272ENST00000641991 KRTAP15-1Q3LI76 137 aa4.22□□□□□ -1.73
CASC19-272ENST00000641991 KMT2DO14686 5537 aa4.22□□□□□ -1.73
CASC19-272ENST00000641991 MACF1Q9UPN3 7388 aaKnown RBP4.13□□□□□ -1.75
CASC19-272ENST00000641991 KRTAP5-9P26371 169 aa4.13□□□□□ -1.75
CASC19-272ENST00000641991 MT1LQ93083 61 aa4.13□□□□□ -1.75
CASC19-272ENST00000641991 SPRR2FQ96RM1 72 aa4.13□□□□□ -1.75
CASC19-272ENST00000641991 KRTAP6-3Q3LI67 103 aa4.06□□□□□ -1.76
CASC19-272ENST00000641991 KRTAP19-4Q3LI73 84 aa4.04□□□□□ -1.76
CASC19-272ENST00000641991 KRTAP19-3Q7Z4W3 81 aa4.04□□□□□ -1.76
CASC19-272ENST00000641991 SPRR5A0A1B0GTR4 108 aa4.03□□□□□ -1.76
CASC19-272ENST00000641991 LCE3CQ5T5A8 94 aa4.03□□□□□ -1.76
CASC19-272ENST00000641991 MT1GP13640 62 aa4□□□□□ -1.77
CASC19-272ENST00000641991 LCE1AQ5T7P2 110 aa3.99□□□□□ -1.77
CASC19-272ENST00000641991 MT1MQ8N339 61 aa3.97□□□□□ -1.77
CASC19-272ENST00000641991 MUC12Q9UKN1 5478 aa3.97□□□□□ -1.77
CASC19-272ENST00000641991 SYNE2Q8WXH0 6885 aaKnown RBP3.93□□□□□ -1.78
CASC19-272ENST00000641991 SPRR2EP22531 72 aa3.93□□□□□ -1.78
CASC19-272ENST00000641991 SPRR2BP35325 72 aa3.93□□□□□ -1.78
CASC19-272ENST00000641991 SPRR2AP35326 72 aa3.93□□□□□ -1.78
CASC19-272ENST00000641991 KRTAP4-3Q9BYR4 195 aa3.89□□□□□ -1.79
CASC19-272ENST00000641991 KRTAP9-6A8MVA2 160 aa3.85□□□□□ -1.79
CASC19-272ENST00000641991 MDN1Q9NU22 5596 aa3.81□□□□□ -1.8
CASC19-272ENST00000641991 SPRR2DP22532 72 aa3.79□□□□□ -1.8
CASC19-272ENST00000641991 LUZP6Q538Z0 58 aa3.79□□□□□ -1.8
CASC19-272ENST00000641991 H3BS24 57 aa3.77□□□□□ -1.81
CASC19-272ENST00000641991 NDUFAF8A1L188 74 aa3.71□□□□□ -1.82
CASC19-272ENST00000641991 NEBP20929 6669 aa3.69□□□□□ -1.82
CASC19-272ENST00000641991 KRTAP5-5Q701N2 237 aaPredicted RBP3.6□□□□□ -1.83
CASC19-272ENST00000641991 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.56□□□□□ -1.84
CASC19-272ENST00000641991 DSTQ03001 7570 aaKnown RBP3.54□□□□□ -1.84
CASC19-272ENST00000641991 KRTAP2-3P0C7H8 128 aa3.53□□□□□ -1.84
CASC19-272ENST00000641991 KRTAP2-4Q9BYR9 128 aa3.53□□□□□ -1.84
CASC19-272ENST00000641991 KRTAP2-1Q9BYU5 128 aa3.52□□□□□ -1.85
CASC19-272ENST00000641991 MT1AP04731 61 aa3.51□□□□□ -1.85
CASC19-272ENST00000641991 KRTAP20-1Q3LI63 56 aa3.49□□□□□ -1.85
CASC19-272ENST00000641991 KRTAP6-1Q3LI64 71 aa3.47□□□□□ -1.85
CASC19-272ENST00000641991 KRTAP2-2Q9BYT5 123 aa3.46□□□□□ -1.86
CASC19-272ENST00000641991 KRTAP5-4Q6L8H1 288 aa3.45□□□□□ -1.86
CASC19-272ENST00000641991 KRTAP12-4P60329 112 aa3.3□□□□□ -1.88
CASC19-272ENST00000641991 MT4P47944 62 aa3.27□□□□□ -1.89
CASC19-272ENST00000641991 KRTAP5-11Q6L8G4 156 aa3.24□□□□□ -1.89
CASC19-272ENST00000641991 SYNE1Q8NF91 8797 aaKnown RBP3.23□□□□□ -1.89
CASC19-272ENST00000641991 A0A0A0MQY5 61 aa3.22□□□□□ -1.89
CASC19-272ENST00000641991 KRTAP20-2Q3LI61 65 aa3.22□□□□□ -1.89
CASC19-272ENST00000641991 KRTAP6-2Q3LI66 62 aa3.2□□□□□ -1.9
CASC19-272ENST00000641991 MT3P25713 68 aa3.15□□□□□ -1.9
CASC19-272ENST00000641991 KRTAP5-2Q701N4 177 aa3.14□□□□□ -1.91
CASC19-272ENST00000641991 HMCN1Q96RW7 5635 aa3.14□□□□□ -1.91
CASC19-272ENST00000641991 INE1O15225 51 aa3.05□□□□□ -1.92
CASC19-272ENST00000641991 KRTAP5-1Q6L8H4 278 aa3.03□□□□□ -1.92
CASC19-272ENST00000641991 LCE3DQ9BYE3 92 aa3□□□□□ -1.93
CASC19-272ENST00000641991 KRTAP4-4Q9BYR3 166 aa2.95□□□□□ -1.94
CASC19-272ENST00000641991 LCE3EQ5T5B0 92 aa2.92□□□□□ -1.94
CASC19-272ENST00000641991 LCE1EQ5T753 118 aa2.84□□□□□ -1.96
CASC19-272ENST00000641991 AHNAK2Q8IVF2 5795 aa2.79□□□□□ -1.96
CASC19-272ENST00000641991 OBSCNQ5VST9 7968 aa2.77□□□□□ -1.97
CASC19-272ENST00000641991 KRTAP5-10Q6L8G5 202 aa2.73□□□□□ -1.97
CASC19-272ENST00000641991 KRTAP5-8O75690 187 aa2.7□□□□□ -1.98
CASC19-272ENST00000641991 KRTAP5-7Q6L8G8 165 aa2.62□□□□□ -1.99
CASC19-272ENST00000641991 LCE1CQ5T751 118 aa2.57□□□□□ -2
CASC19-272ENST00000641991 LCE1BQ5T7P3 118 aa2.57□□□□□ -2
CASC19-272ENST00000641991 GPR98Q8WXG9 6306 aa2.56□□□□□ -2
CASC19-272ENST00000641991 PRM1P04553 51 aa2.54□□□□□ -2
CASC19-272ENST00000641991 MUC5ACP98088 5654 aa2.48□□□□□ -2.01
CASC19-272ENST00000641991 KRTAP21-2Q3LI59 83 aa2.28□□□□□ -2.04
CASC19-272ENST00000641991 MUC5BQ9HC84 5762 aaPredicted RBP2.24□□□□□ -2.05
CASC19-272ENST00000641991 AHNAKQ09666 5890 aaKnown RBP2.1□□□□□ -2.07
CASC19-272ENST00000641991 LCE1FQ5T754 118 aa2.06□□□□□ -2.08
CASC19-272ENST00000641991 PHGR1C9JFL3 82 aa1.97□□□□□ -2.09
CASC19-272ENST00000641991 MUC19Q7Z5P9 8384 aa1.62□□□□□ -2.15
CASC19-272ENST00000641991 KRTAP21-1Q3LI58 79 aa1.56□□□□□ -2.16
CASC19-272ENST00000641991 MUC16Q8WXI7 14507 aa1.23□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 11.3 ms