RNA–Protein interactions for RNA: ENST00000641711.1

PHGDH-224, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 712 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-224ENST00000641711 MACF1Q9UPN3 7388 aaKnown RBP4.16□□□□□ -1.74
PHGDH-224ENST00000641711 KRTAP6-3Q3LI67 103 aa4.1□□□□□ -1.75
PHGDH-224ENST00000641711 KRTAP10-12P60413 245 aa4.04□□□□□ -1.76
PHGDH-224ENST00000641711 LCE3AQ5TA76 89 aa4.04□□□□□ -1.76
PHGDH-224ENST00000641711 KRTAP5-9P26371 169 aa4.02□□□□□ -1.77
PHGDH-224ENST00000641711 KRTAP8-1Q8IUC2 63 aa4.01□□□□□ -1.77
PHGDH-224ENST00000641711 SYNE2Q8WXH0 6885 aaKnown RBP4□□□□□ -1.77
PHGDH-224ENST00000641711 KRTAP10-7P60409 375 aaPredicted RBP4□□□□□ -1.77
PHGDH-224ENST00000641711 SPRR5A0A1B0GTR4 108 aa3.91□□□□□ -1.78
PHGDH-224ENST00000641711 KRTAP12-3P60328 96 aa3.89□□□□□ -1.79
PHGDH-224ENST00000641711 SPRR2FQ96RM1 72 aa3.89□□□□□ -1.79
PHGDH-224ENST00000641711 NDUFAF8A1L188 74 aa3.87□□□□□ -1.79
PHGDH-224ENST00000641711 KMT2DO14686 5537 aa3.86□□□□□ -1.79
PHGDH-224ENST00000641711 LUZP6Q538Z0 58 aa3.82□□□□□ -1.8
PHGDH-224ENST00000641711 NEBP20929 6669 aa3.8□□□□□ -1.8
PHGDH-224ENST00000641711 SPRR2EP22531 72 aa3.79□□□□□ -1.8
PHGDH-224ENST00000641711 SPRR2BP35325 72 aa3.79□□□□□ -1.8
PHGDH-224ENST00000641711 SPRR2AP35326 72 aa3.79□□□□□ -1.8
PHGDH-224ENST00000641711 MUC12Q9UKN1 5478 aa3.79□□□□□ -1.8
PHGDH-224ENST00000641711 KRTAP19-5Q3LI72 72 aa3.78□□□□□ -1.8
PHGDH-224ENST00000641711 KRTAP19-7Q3SYF9 63 aa3.77□□□□□ -1.81
PHGDH-224ENST00000641711 LCE1AQ5T7P2 110 aa3.77□□□□□ -1.81
PHGDH-224ENST00000641711 MDN1Q9NU22 5596 aa3.75□□□□□ -1.81
PHGDH-224ENST00000641711 A0A0A0MQY5 61 aa3.75□□□□□ -1.81
PHGDH-224ENST00000641711 MT1EP04732 61 aa3.74□□□□□ -1.81
PHGDH-224ENST00000641711 KRTAP5-3Q6L8H2 238 aa3.68□□□□□ -1.82
PHGDH-224ENST00000641711 KRTAP20-1Q3LI63 56 aa3.67□□□□□ -1.82
PHGDH-224ENST00000641711 KRTAP19-3Q7Z4W3 81 aa3.67□□□□□ -1.82
PHGDH-224ENST00000641711 SPRR2DP22532 72 aa3.66□□□□□ -1.82
PHGDH-224ENST00000641711 LCE3CQ5T5A8 94 aa3.65□□□□□ -1.83
PHGDH-224ENST00000641711 KRTAP2-3P0C7H8 128 aa3.64□□□□□ -1.83
PHGDH-224ENST00000641711 KRTAP2-4Q9BYR9 128 aa3.64□□□□□ -1.83
PHGDH-224ENST00000641711 MT1GP13640 62 aa3.63□□□□□ -1.83
PHGDH-224ENST00000641711 MT1LQ93083 61 aa3.61□□□□□ -1.83
PHGDH-224ENST00000641711 MT1MQ8N339 61 aa3.54□□□□□ -1.84
PHGDH-224ENST00000641711 KRTAP2-2Q9BYT5 123 aa3.54□□□□□ -1.84
PHGDH-224ENST00000641711 KRTAP2-1Q9BYU5 128 aa3.54□□□□□ -1.84
PHGDH-224ENST00000641711 DSTQ03001 7570 aaKnown RBP3.46□□□□□ -1.86
PHGDH-224ENST00000641711 KRTAP9-6A8MVA2 160 aa3.45□□□□□ -1.86
PHGDH-224ENST00000641711 KRTAP4-3Q9BYR4 195 aa3.36□□□□□ -1.87
PHGDH-224ENST00000641711 KRTAP5-4Q6L8H1 288 aa3.27□□□□□ -1.89
PHGDH-224ENST00000641711 MT3P25713 68 aa3.25□□□□□ -1.89
PHGDH-224ENST00000641711 INE1O15225 51 aa3.24□□□□□ -1.89
PHGDH-224ENST00000641711 KRTAP5-5Q701N2 237 aaPredicted RBP3.23□□□□□ -1.89
PHGDH-224ENST00000641711 MT4P47944 62 aa3.14□□□□□ -1.91
PHGDH-224ENST00000641711 KRTAP12-4P60329 112 aa3.12□□□□□ -1.91
PHGDH-224ENST00000641711 MT1AP04731 61 aa3.1□□□□□ -1.91
PHGDH-224ENST00000641711 HMCN1Q96RW7 5635 aa3.1□□□□□ -1.91
PHGDH-224ENST00000641711 KRTAP20-2Q3LI61 65 aa3.05□□□□□ -1.92
PHGDH-224ENST00000641711 LCE1FQ5T754 118 aa3.05□□□□□ -1.92
PHGDH-224ENST00000641711 SYNE1Q8NF91 8797 aaKnown RBP3.04□□□□□ -1.92
PHGDH-224ENST00000641711 KRTAP6-1Q3LI64 71 aa3.01□□□□□ -1.93
PHGDH-224ENST00000641711 LCE1EQ5T753 118 aa3□□□□□ -1.93
PHGDH-224ENST00000641711 KRTAP5-11Q6L8G4 156 aa2.98□□□□□ -1.93
PHGDH-224ENST00000641711 GPR98Q8WXG9 6306 aa2.94□□□□□ -1.94
PHGDH-224ENST00000641711 AHNAK2Q8IVF2 5795 aa2.92□□□□□ -1.94
PHGDH-224ENST00000641711 KRTAP5-2Q701N4 177 aa2.91□□□□□ -1.94
PHGDH-224ENST00000641711 KRTAP5-10Q6L8G5 202 aa2.86□□□□□ -1.95
PHGDH-224ENST00000641711 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.85□□□□□ -1.95
PHGDH-224ENST00000641711 KRTAP6-2Q3LI66 62 aa2.83□□□□□ -1.96
PHGDH-224ENST00000641711 LCE3DQ9BYE3 92 aa2.76□□□□□ -1.97
PHGDH-224ENST00000641711 KRTAP5-7Q6L8G8 165 aa2.75□□□□□ -1.97
PHGDH-224ENST00000641711 LCE3EQ5T5B0 92 aa2.72□□□□□ -1.97
PHGDH-224ENST00000641711 OBSCNQ5VST9 7968 aa2.63□□□□□ -1.99
PHGDH-224ENST00000641711 KRTAP5-8O75690 187 aa2.62□□□□□ -1.99
PHGDH-224ENST00000641711 KRTAP5-1Q6L8H4 278 aa2.55□□□□□ -2
PHGDH-224ENST00000641711 MUC5ACP98088 5654 aa2.47□□□□□ -2.01
PHGDH-224ENST00000641711 PRM1P04553 51 aa2.45□□□□□ -2.02
PHGDH-224ENST00000641711 MUC5BQ9HC84 5762 aaPredicted RBP2.38□□□□□ -2.03
PHGDH-224ENST00000641711 LCE1CQ5T751 118 aa2.37□□□□□ -2.03
PHGDH-224ENST00000641711 LCE1BQ5T7P3 118 aa2.37□□□□□ -2.03
PHGDH-224ENST00000641711 KRTAP4-4Q9BYR3 166 aa2.37□□□□□ -2.03
PHGDH-224ENST00000641711 AHNAKQ09666 5890 aaKnown RBP2.34□□□□□ -2.04
PHGDH-224ENST00000641711 KRTAP21-2Q3LI59 83 aa1.99□□□□□ -2.09
PHGDH-224ENST00000641711 PHGR1C9JFL3 82 aa1.82□□□□□ -2.12
PHGDH-224ENST00000641711 MUC19Q7Z5P9 8384 aa1.68□□□□□ -2.14
PHGDH-224ENST00000641711 KRTAP21-1Q3LI58 79 aa1.56□□□□□ -2.16
PHGDH-224ENST00000641711 MUC16Q8WXI7 14507 aa1.19□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 170 ms