RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 MT1EP04732 61 aa3.52□□□□□ -1.85
PHGDH-215ENST00000641371 KMT2DO14686 5537 aa3.52□□□□□ -1.85
PHGDH-215ENST00000641371 MUC12Q9UKN1 5478 aa3.52□□□□□ -1.85
PHGDH-215ENST00000641371 LCE3CQ5T5A8 94 aa3.46□□□□□ -1.86
PHGDH-215ENST00000641371 MT1LQ93083 61 aa3.45□□□□□ -1.86
PHGDH-215ENST00000641371 KRTAP2-3P0C7H8 128 aa3.42□□□□□ -1.86
PHGDH-215ENST00000641371 KRTAP2-4Q9BYR9 128 aa3.42□□□□□ -1.86
PHGDH-215ENST00000641371 MT1GP13640 62 aa3.4□□□□□ -1.87
PHGDH-215ENST00000641371 KRTAP19-3Q7Z4W3 81 aa3.4□□□□□ -1.87
PHGDH-215ENST00000641371 SPRR2FQ96RM1 72 aa3.4□□□□□ -1.87
PHGDH-215ENST00000641371 MDN1Q9NU22 5596 aa3.39□□□□□ -1.87
PHGDH-215ENST00000641371 KRTAP5-9P26371 169 aa3.39□□□□□ -1.87
PHGDH-215ENST00000641371 NDUFAF8A1L188 74 aa3.36□□□□□ -1.87
PHGDH-215ENST00000641371 LCE5AQ5TCM9 118 aa3.32□□□□□ -1.88
PHGDH-215ENST00000641371 MT1MQ8N339 61 aa3.31□□□□□ -1.88
PHGDH-215ENST00000641371 LCE1AQ5T7P2 110 aa3.28□□□□□ -1.88
PHGDH-215ENST00000641371 KRTAP2-2Q9BYT5 123 aa3.28□□□□□ -1.88
PHGDH-215ENST00000641371 KRTAP2-1Q9BYU5 128 aa3.28□□□□□ -1.88
PHGDH-215ENST00000641371 SPRR2EP22531 72 aa3.27□□□□□ -1.89
PHGDH-215ENST00000641371 SPRR2BP35325 72 aa3.27□□□□□ -1.89
PHGDH-215ENST00000641371 SPRR2AP35326 72 aa3.27□□□□□ -1.89
PHGDH-215ENST00000641371 GPR98Q8WXG9 6306 aa3.27□□□□□ -1.89
PHGDH-215ENST00000641371 KRTAP4-7Q9BYR0 210 aa3.22□□□□□ -1.89
PHGDH-215ENST00000641371 KRTAP9-6A8MVA2 160 aa3.17□□□□□ -1.9
PHGDH-215ENST00000641371 SPRR2DP22532 72 aa3.16□□□□□ -1.9
PHGDH-215ENST00000641371 KRTAP4-3Q9BYR4 195 aa3.12□□□□□ -1.91
PHGDH-215ENST00000641371 A0A0A0MQY5 61 aa3.11□□□□□ -1.91
PHGDH-215ENST00000641371 LCE3BQ5TA77 95 aa3.1□□□□□ -1.91
PHGDH-215ENST00000641371 KRTAP4-9Q9BYQ8 210 aa3.05□□□□□ -1.92
PHGDH-215ENST00000641371 LOC100996750A0A140TA64 210 aa3.03□□□□□ -1.92
PHGDH-215ENST00000641371 H3BS24 57 aa3.03□□□□□ -1.92
PHGDH-215ENST00000641371 DSTQ03001 7570 aaKnown RBP3.02□□□□□ -1.93
PHGDH-215ENST00000641371 KRTAP5-5Q701N2 237 aaPredicted RBP2.98□□□□□ -1.93
PHGDH-215ENST00000641371 MT1AP04731 61 aa2.97□□□□□ -1.93
PHGDH-215ENST00000641371 INE1O15225 51 aa2.92□□□□□ -1.94
PHGDH-215ENST00000641371 LCE1DQ5T752 114 aa2.89□□□□□ -1.95
PHGDH-215ENST00000641371 AHNAK2Q8IVF2 5795 aa2.89□□□□□ -1.95
PHGDH-215ENST00000641371 HMCN1Q96RW7 5635 aa2.88□□□□□ -1.95
PHGDH-215ENST00000641371 KRTAP6-1Q3LI64 71 aa2.87□□□□□ -1.95
PHGDH-215ENST00000641371 KRTAP5-10Q6L8G5 202 aa2.87□□□□□ -1.95
PHGDH-215ENST00000641371 LCE4AQ5TA78 99 aa2.85□□□□□ -1.95
PHGDH-215ENST00000641371 KRTAP5-4Q6L8H1 288 aa2.85□□□□□ -1.95
PHGDH-215ENST00000641371 MT4P47944 62 aa2.83□□□□□ -1.96
PHGDH-215ENST00000641371 KRTAP12-4P60329 112 aa2.83□□□□□ -1.96
PHGDH-215ENST00000641371 SYNE1Q8NF91 8797 aaKnown RBP2.82□□□□□ -1.96
PHGDH-215ENST00000641371 KRTAP5-7Q6L8G8 165 aa2.8□□□□□ -1.96
PHGDH-215ENST00000641371 KRTAP9-4Q9BYQ2 154 aa2.8□□□□□ -1.96
PHGDH-215ENST00000641371 MT3P25713 68 aa2.72□□□□□ -1.97
PHGDH-215ENST00000641371 KRTAP5-3Q6L8H2 238 aa2.7□□□□□ -1.98
PHGDH-215ENST00000641371 KRTAP4-6Q9BYQ5 205 aa2.7□□□□□ -1.98
PHGDH-215ENST00000641371 KRTAP20-2Q3LI61 65 aa2.64□□□□□ -1.99
PHGDH-215ENST00000641371 KRTAP6-2Q3LI66 62 aa2.64□□□□□ -1.99
PHGDH-215ENST00000641371 LCE3DQ9BYE3 92 aa2.63□□□□□ -1.99
PHGDH-215ENST00000641371 KRTAP5-2Q701N4 177 aa2.59□□□□□ -1.99
PHGDH-215ENST00000641371 LCE3EQ5T5B0 92 aa2.58□□□□□ -2
PHGDH-215ENST00000641371 AHNAKQ09666 5890 aaKnown RBP2.51□□□□□ -2.01
PHGDH-215ENST00000641371 MUC5ACP98088 5654 aa2.45□□□□□ -2.02
PHGDH-215ENST00000641371 OBSCNQ5VST9 7968 aa2.43□□□□□ -2.02
PHGDH-215ENST00000641371 MUC5BQ9HC84 5762 aaPredicted RBP2.4□□□□□ -2.02
PHGDH-215ENST00000641371 KRTAP4-11Q9BYQ6 195 aa2.39□□□□□ -2.03
PHGDH-215ENST00000641371 LCE1EQ5T753 118 aa2.38□□□□□ -2.03
PHGDH-215ENST00000641371 KRTAP5-8O75690 187 aa2.36□□□□□ -2.03
PHGDH-215ENST00000641371 KRTAP9-9Q9BYP9 154 aa2.26□□□□□ -2.05
PHGDH-215ENST00000641371 PRM1P04553 51 aa2.21□□□□□ -2.06
PHGDH-215ENST00000641371 KRTAP5-1Q6L8H4 278 aa2.2□□□□□ -2.06
PHGDH-215ENST00000641371 LCE1CQ5T751 118 aa2.19□□□□□ -2.06
PHGDH-215ENST00000641371 LCE1BQ5T7P3 118 aa2.19□□□□□ -2.06
PHGDH-215ENST00000641371 KRTAP4-2Q9BYR5 136 aa2.12□□□□□ -2.07
PHGDH-215ENST00000641371 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.07□□□□□ -2.08
PHGDH-215ENST00000641371 KRTAP5-11Q6L8G4 156 aa1.94□□□□□ -2.1
PHGDH-215ENST00000641371 KRTAP21-2Q3LI59 83 aa1.88□□□□□ -2.11
PHGDH-215ENST00000641371 KRTAP4-12Q9BQ66 201 aa1.85□□□□□ -2.11
PHGDH-215ENST00000641371 LCE1FQ5T754 118 aa1.79□□□□□ -2.12
PHGDH-215ENST00000641371 PHGR1C9JFL3 82 aa1.7□□□□□ -2.14
PHGDH-215ENST00000641371 KRTAP4-4Q9BYR3 166 aa1.59□□□□□ -2.15
PHGDH-215ENST00000641371 KRTAP21-1Q3LI58 79 aa1.39□□□□□ -2.19
PHGDH-215ENST00000641371 MUC19Q7Z5P9 8384 aa1.38□□□□□ -2.19
PHGDH-215ENST00000641371 MUC16Q8WXI7 14507 aa1.14□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 48.3 ms