RNA–Protein interactions for RNA: ENST00000641272.1

PHGDH-213, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-213ENST00000641272 A8MU10 97 aa5.81□□□□□ -1.48
PHGDH-213ENST00000641272 KRTAP5-4Q6L8H1 288 aa5.79□□□□□ -1.48
PHGDH-213ENST00000641272 KRTAP4-6Q9BYQ5 205 aa5.78□□□□□ -1.48
PHGDH-213ENST00000641272 SMIM26A0A096LP01 95 aa5.76□□□□□ -1.49
PHGDH-213ENST00000641272 A0A1B0GU69 56 aa5.74□□□□□ -1.49
PHGDH-213ENST00000641272 PCP4P48539 62 aa5.73□□□□□ -1.49
PHGDH-213ENST00000641272 KRTAP5-10Q6L8G5 202 aa5.73□□□□□ -1.49
PHGDH-213ENST00000641272 TNP1P09430 55 aa5.72□□□□□ -1.49
PHGDH-213ENST00000641272 KRTAP4-7Q9BYR0 210 aa5.69□□□□□ -1.5
PHGDH-213ENST00000641272 PRR15LQ9BU68 103 aa5.65□□□□□ -1.5
PHGDH-213ENST00000641272 LINC01558Q9Y6Z2 57 aa5.63□□□□□ -1.51
PHGDH-213ENST00000641272 KRTAP12-3P60328 96 aa5.57□□□□□ -1.52
PHGDH-213ENST00000641272 KRTAP5-3Q6L8H2 238 aa5.56□□□□□ -1.52
PHGDH-213ENST00000641272 V9GYY9 64 aa5.56□□□□□ -1.52
PHGDH-213ENST00000641272 RPS28P62857 69 aaKnown RBP5.52□□□□□ -1.53
PHGDH-213ENST00000641272 KRTAP20-2Q3LI61 65 aa5.52□□□□□ -1.53
PHGDH-213ENST00000641272 KRTAP5-7Q6L8G8 165 aa5.52□□□□□ -1.53
PHGDH-213ENST00000641272 Q1T7F1 81 aa5.49□□□□□ -1.53
PHGDH-213ENST00000641272 KRTAP5-5Q701N2 237 aaPredicted RBP5.47□□□□□ -1.53
PHGDH-213ENST00000641272 UQCR11O14957 56 aa5.46□□□□□ -1.54
PHGDH-213ENST00000641272 LOC100996750A0A140TA64 210 aa5.4□□□□□ -1.54
PHGDH-213ENST00000641272 SPRR5A0A1B0GTR4 108 aa5.4□□□□□ -1.54
PHGDH-213ENST00000641272 PSPHP1O15172 72 aa5.39□□□□□ -1.55
PHGDH-213ENST00000641272 KRTAP12-4P60329 112 aa5.37□□□□□ -1.55
PHGDH-213ENST00000641272 SYNE1Q8NF91 8797 aaKnown RBP5.36□□□□□ -1.55
PHGDH-213ENST00000641272 MIR22HGQ0VDD5 57 aa5.35□□□□□ -1.55
PHGDH-213ENST00000641272 A6NED7 52 aa5.26□□□□□ -1.57
PHGDH-213ENST00000641272 KRTAP25-1Q3LHN0 102 aa5.26□□□□□ -1.57
PHGDH-213ENST00000641272 K7ERS5 55 aa5.24□□□□□ -1.57
PHGDH-213ENST00000641272 KRTAP15-1Q3LI76 137 aa5.11□□□□□ -1.59
PHGDH-213ENST00000641272 CDC42SE1Q9NRR8 79 aa5.1□□□□□ -1.59
PHGDH-213ENST00000641272 LCE3CQ5T5A8 94 aa5.09□□□□□ -1.59
PHGDH-213ENST00000641272 KRTAP4-11Q9BYQ6 195 aa5.07□□□□□ -1.6
PHGDH-213ENST00000641272 KRTAP19-4Q3LI73 84 aa5.06□□□□□ -1.6
PHGDH-213ENST00000641272 KRTAP6-1Q3LI64 71 aa5.05□□□□□ -1.6
PHGDH-213ENST00000641272 MT1AP04731 61 aa5.04□□□□□ -1.6
PHGDH-213ENST00000641272 KRTAP5-2Q701N4 177 aa5.03□□□□□ -1.6
PHGDH-213ENST00000641272 KRTAP23-1A1A580 65 aa4.96□□□□□ -1.62
PHGDH-213ENST00000641272 AHNAKQ09666 5890 aaKnown RBP4.93□□□□□ -1.62
PHGDH-213ENST00000641272 KRTAP5-8O75690 187 aa4.92□□□□□ -1.62
PHGDH-213ENST00000641272 ROMO1P60602 79 aa4.9□□□□□ -1.63
PHGDH-213ENST00000641272 MUC5ACP98088 5654 aa4.88□□□□□ -1.63
PHGDH-213ENST00000641272 KRTAP9-6A8MVA2 160 aa4.87□□□□□ -1.63
PHGDH-213ENST00000641272 KRTAP6-2Q3LI66 62 aa4.87□□□□□ -1.63
PHGDH-213ENST00000641272 BRK1Q8WUW1 75 aa4.86□□□□□ -1.63
PHGDH-213ENST00000641272 KRTAP9-4Q9BYQ2 154 aa4.86□□□□□ -1.63
PHGDH-213ENST00000641272 OBSCNQ5VST9 7968 aa4.85□□□□□ -1.63
PHGDH-213ENST00000641272 MUC5BQ9HC84 5762 aaPredicted RBP4.84□□□□□ -1.64
PHGDH-213ENST00000641272 KRTAP9-9Q9BYP9 154 aa4.69□□□□□ -1.66
PHGDH-213ENST00000641272 PMAIP1Q13794 54 aa4.62□□□□□ -1.67
PHGDH-213ENST00000641272 MT3P25713 68 aa4.59□□□□□ -1.67
PHGDH-213ENST00000641272 KRTAP5-1Q6L8H4 278 aa4.57□□□□□ -1.68
PHGDH-213ENST00000641272 PRO0628Q9UI54 55 aa4.55□□□□□ -1.68
PHGDH-213ENST00000641272 PRAC1Q96KF2 57 aa4.3□□□□□ -1.72
PHGDH-213ENST00000641272 KTN1-AS1Q86SY8 53 aa4.26□□□□□ -1.73
PHGDH-213ENST00000641272 LCE1EQ5T753 118 aa4.21□□□□□ -1.74
PHGDH-213ENST00000641272 LCE1BQ5T7P3 118 aa4.12□□□□□ -1.75
PHGDH-213ENST00000641272 KRTAP4-2Q9BYR5 136 aa4.1□□□□□ -1.75
PHGDH-213ENST00000641272 SVIPQ8NHG7 77 aa4.04□□□□□ -1.76
PHGDH-213ENST00000641272 LCE1CQ5T751 118 aa3.93□□□□□ -1.78
PHGDH-213ENST00000641272 KRTAP4-12Q9BQ66 201 aa3.85□□□□□ -1.79
PHGDH-213ENST00000641272 LUZP6Q538Z0 58 aa3.68□□□□□ -1.82
PHGDH-213ENST00000641272 KRTAP5-11Q6L8G4 156 aa3.61□□□□□ -1.83
PHGDH-213ENST00000641272 LCE3DQ9BYE3 92 aa3.61□□□□□ -1.83
PHGDH-213ENST00000641272 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.53□□□□□ -1.84
PHGDH-213ENST00000641272 LCE1FQ5T754 118 aa3.51□□□□□ -1.85
PHGDH-213ENST00000641272 PHGR1C9JFL3 82 aa3.38□□□□□ -1.87
PHGDH-213ENST00000641272 LCE3EQ5T5B0 92 aa3.36□□□□□ -1.87
PHGDH-213ENST00000641272 KRTAP21-2Q3LI59 83 aa3.3□□□□□ -1.88
PHGDH-213ENST00000641272 NDUFAF8A1L188 74 aa3.21□□□□□ -1.9
PHGDH-213ENST00000641272 KRTAP4-4Q9BYR3 166 aa3.14□□□□□ -1.91
PHGDH-213ENST00000641272 MUC19Q7Z5P9 8384 aa3.02□□□□□ -1.93
PHGDH-213ENST00000641272 H3BS24 57 aa2.86□□□□□ -1.95
PHGDH-213ENST00000641272 A0A0A0MQY5 61 aa2.82□□□□□ -1.96
PHGDH-213ENST00000641272 INE1O15225 51 aa2.7□□□□□ -1.98
PHGDH-213ENST00000641272 KRTAP21-1Q3LI58 79 aa2.52□□□□□ -2.01
PHGDH-213ENST00000641272 PRM1P04553 51 aa2.49□□□□□ -2.01
PHGDH-213ENST00000641272 MUC16Q8WXI7 14507 aa2.05□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 51.7 ms