RNA–Protein interactions for RNA: ENST00000640931.1

RTTN-223, Transcript of rotatin, human

TSL 5

Gene RTTN, Length 2,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RTTN-223	ENST00000640931	KRTAP20-1	Q3LI63	56 aa		3.26	□□□□□ -1.89
RTTN-223	ENST00000640931	KRTAP10-7	P60409	375 aa	Predicted RBP	3.23	□□□□□ -1.89
RTTN-223	ENST00000640931	KRTAP6-3	Q3LI67	103 aa		3.23	□□□□□ -1.89
RTTN-223	ENST00000640931	SPRR2G	Q9BYE4	73 aa		3.21	□□□□□ -1.89
RTTN-223	ENST00000640931	KRTAP5-11	Q6L8G4	156 aa		3.2	□□□□□ -1.9
RTTN-223	ENST00000640931	NEB	P20929	6669 aa		3.19	□□□□□ -1.9
RTTN-223	ENST00000640931	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	3.18	□□□□□ -1.9
RTTN-223	ENST00000640931	USH2A	O75445	5202 aa		3.18	□□□□□ -1.9
RTTN-223	ENST00000640931	SYNE2	Q8WXH0	6885 aa	Known RBP	3.16	□□□□□ -1.9
RTTN-223	ENST00000640931	MT1B	P07438	61 aa		3.16	□□□□□ -1.9
RTTN-223	ENST00000640931	LCE1A	Q5T7P2	110 aa		3.15	□□□□□ -1.91
RTTN-223	ENST00000640931	MACF1	Q9UPN3	7388 aa	Known RBP	3.12	□□□□□ -1.91
RTTN-223	ENST00000640931	KRTAP19-8	Q3LI54	63 aa		3.12	□□□□□ -1.91
RTTN-223	ENST00000640931	KRTAP10-5	P60370	271 aa		3.08	□□□□□ -1.92
RTTN-223	ENST00000640931	MT1X	P80297	61 aa		3.08	□□□□□ -1.92
RTTN-223	ENST00000640931	GPR98	Q8WXG9	6306 aa		3.07	□□□□□ -1.92
RTTN-223	ENST00000640931	LCE1E	Q5T753	118 aa		3.06	□□□□□ -1.92
RTTN-223	ENST00000640931	KMT2D	O14686	5537 aa		3.06	□□□□□ -1.92
RTTN-223	ENST00000640931	KRTAP5-9	P26371	169 aa		3.04	□□□□□ -1.92
RTTN-223	ENST00000640931	KRTAP2-3	P0C7H8	128 aa		3.04	□□□□□ -1.92
RTTN-223	ENST00000640931	LCE3A	Q5TA76	89 aa		3.04	□□□□□ -1.92
RTTN-223	ENST00000640931	KRTAP2-4	Q9BYR9	128 aa		3.04	□□□□□ -1.92
RTTN-223	ENST00000640931	KRTAP10-12	P60413	245 aa		3.03	□□□□□ -1.92
RTTN-223	ENST00000640931	KRTAP8-1	Q8IUC2	63 aa		3.03	□□□□□ -1.92
RTTN-223	ENST00000640931	KRTAP2-2	Q9BYT5	123 aa		2.96	□□□□□ -1.94
RTTN-223	ENST00000640931	KRTAP19-6	Q3LI70	58 aa		2.94	□□□□□ -1.94
RTTN-223	ENST00000640931	KRTAP5-4	Q6L8H1	288 aa		2.91	□□□□□ -1.94
RTTN-223	ENST00000640931	KRTAP2-1	Q9BYU5	128 aa		2.9	□□□□□ -1.95
RTTN-223	ENST00000640931	KRTAP12-3	P60328	96 aa		2.88	□□□□□ -1.95
RTTN-223	ENST00000640931	MUC12	Q9UKN1	5478 aa		2.87	□□□□□ -1.95
RTTN-223	ENST00000640931	KRTAP19-5	Q3LI72	72 aa		2.84	□□□□□ -1.95
RTTN-223	ENST00000640931	KRTAP5-1	Q6L8H4	278 aa		2.84	□□□□□ -1.95
RTTN-223	ENST00000640931	KRTAP4-4	Q9BYR3	166 aa		2.82	□□□□□ -1.96
RTTN-223	ENST00000640931	LCE3C	Q5T5A8	94 aa		2.77	□□□□□ -1.97
RTTN-223	ENST00000640931	MDN1	Q9NU22	5596 aa		2.75	□□□□□ -1.97
RTTN-223	ENST00000640931	KRTAP19-7	Q3SYF9	63 aa		2.75	□□□□□ -1.97
RTTN-223	ENST00000640931	MT3	P25713	68 aa		2.7	□□□□□ -1.98
RTTN-223	ENST00000640931	MT1E	P04732	61 aa		2.67	□□□□□ -1.98
RTTN-223	ENST00000640931	KRTAP12-4	P60329	112 aa		2.66	□□□□□ -1.98
RTTN-223	ENST00000640931	KRTAP9-6	A8MVA2	160 aa		2.65	□□□□□ -1.98
RTTN-223	ENST00000640931	SPRR2E	P22531	72 aa		2.65	□□□□□ -1.99
RTTN-223	ENST00000640931	SPRR2B	P35325	72 aa		2.65	□□□□□ -1.99
RTTN-223	ENST00000640931	SPRR2A	P35326	72 aa		2.65	□□□□□ -1.99
RTTN-223	ENST00000640931	MT1L	Q93083	61 aa		2.64	□□□□□ -1.99
RTTN-223	ENST00000640931	KRTAP4-3	Q9BYR4	195 aa		2.63	□□□□□ -1.99
RTTN-223	ENST00000640931	KRTAP5-7	Q6L8G8	165 aa		2.59	□□□□□ -1.99
RTTN-223	ENST00000640931	AHNAK2	Q8IVF2	5795 aa		2.58	□□□□□ -2
RTTN-223	ENST00000640931	SPRR2D	P22532	72 aa		2.58	□□□□□ -2
RTTN-223	ENST00000640931	KRTAP5-10	Q6L8G5	202 aa		2.56	□□□□□ -2
RTTN-223	ENST00000640931	KRTAP5-2	Q701N4	177 aa		2.56	□□□□□ -2
RTTN-223	ENST00000640931	SPRR2F	Q96RM1	72 aa		2.55	□□□□□ -2
RTTN-223	ENST00000640931	DST	Q03001	7570 aa	Known RBP	2.52	□□□□□ -2.01
RTTN-223	ENST00000640931	MT1G	P13640	62 aa		2.51	□□□□□ -2.01
RTTN-223	ENST00000640931	KRTAP19-3	Q7Z4W3	81 aa		2.51	□□□□□ -2.01
RTTN-223	ENST00000640931	MT1M	Q8N339	61 aa		2.51	□□□□□ -2.01
RTTN-223	ENST00000640931	MUC5B	Q9HC84	5762 aa	Predicted RBP	2.44	□□□□□ -2.02
RTTN-223	ENST00000640931	PRM1	P04553	51 aa		2.43	□□□□□ -2.02
RTTN-223	ENST00000640931	AHNAK	Q09666	5890 aa	Known RBP	2.43	□□□□□ -2.02
RTTN-223	ENST00000640931	LCE1F	Q5T754	118 aa		2.38	□□□□□ -2.03
RTTN-223	ENST00000640931	OBSCN	Q5VST9	7968 aa		2.38	□□□□□ -2.03
RTTN-223	ENST00000640931	KRTAP5-5	Q701N2	237 aa	Predicted RBP	2.33	□□□□□ -2.04
RTTN-223	ENST00000640931	SYNE1	Q8NF91	8797 aa	Known RBP	2.32	□□□□□ -2.04
RTTN-223	ENST00000640931	MT1A	P04731	61 aa		2.31	□□□□□ -2.04
RTTN-223	ENST00000640931	LCE3E	Q5T5B0	92 aa		2.29	□□□□□ -2.04
RTTN-223	ENST00000640931	KRTAP6-1	Q3LI64	71 aa		2.27	□□□□□ -2.05
RTTN-223	ENST00000640931	KRTAP5-8	O75690	187 aa		2.26	□□□□□ -2.05
RTTN-223	ENST00000640931	MT4	P47944	62 aa		2.25	□□□□□ -2.05
RTTN-223	ENST00000640931	LCE3D	Q9BYE3	92 aa		2.23	□□□□□ -2.05
RTTN-223	ENST00000640931	MUC5AC	P98088	5654 aa		2.23	□□□□□ -2.05
RTTN-223	ENST00000640931	KRTAP6-2	Q3LI66	62 aa		2.14	□□□□□ -2.07
RTTN-223	ENST00000640931	KRTAP20-2	Q3LI61	65 aa		2	□□□□□ -2.09
RTTN-223	ENST00000640931	LCE1C	Q5T751	118 aa		1.97	□□□□□ -2.09
RTTN-223	ENST00000640931	LCE1B	Q5T7P3	118 aa		1.97	□□□□□ -2.09
RTTN-223	ENST00000640931	KRTAP21-1	Q3LI58	79 aa		1.66	□□□□□ -2.14
RTTN-223	ENST00000640931	MUC19	Q7Z5P9	8384 aa		1.57	□□□□□ -2.16
RTTN-223	ENST00000640931	PHGR1	C9JFL3	82 aa		1.51	□□□□□ -2.17
RTTN-223	ENST00000640931	KRTAP21-2	Q3LI59	83 aa		1.46	□□□□□ -2.18
RTTN-223	ENST00000640931	MUC16	Q8WXI7	14507 aa		0.83	□□□□□ -2.28

Retrieved 78 of 20,778 RNA–protein pairs in 38.6 ms