RNA–Protein interactions for RNA: ENST00000640900.1

SCARB2-225, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 531 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-225ENST00000640900 KMT2DO14686 5537 aa3.59□□□□□ -1.84
SCARB2-225ENST00000640900 KRTAP2-2Q9BYT5 123 aa3.55□□□□□ -1.84
SCARB2-225ENST00000640900 KRTAP6-3Q3LI67 103 aa3.53□□□□□ -1.84
SCARB2-225ENST00000640900 TNP1P09430 55 aa3.52□□□□□ -1.85
SCARB2-225ENST00000640900 KRTAP5-9P26371 169 aa3.52□□□□□ -1.85
SCARB2-225ENST00000640900 PMAIP1Q13794 54 aa3.51□□□□□ -1.85
SCARB2-225ENST00000640900 KRTAP25-1Q3LHN0 102 aa3.5□□□□□ -1.85
SCARB2-225ENST00000640900 ROMO1P60602 79 aa3.49□□□□□ -1.85
SCARB2-225ENST00000640900 SYNE2Q8WXH0 6885 aaKnown RBP3.49□□□□□ -1.85
SCARB2-225ENST00000640900 KRTAP8-1Q8IUC2 63 aa3.48□□□□□ -1.85
SCARB2-225ENST00000640900 KRTAP19-7Q3SYF9 63 aa3.44□□□□□ -1.86
SCARB2-225ENST00000640900 LCE3AQ5TA76 89 aa3.44□□□□□ -1.86
SCARB2-225ENST00000640900 MUC12Q9UKN1 5478 aa3.42□□□□□ -1.86
SCARB2-225ENST00000640900 NDUFAF8A1L188 74 aa3.39□□□□□ -1.87
SCARB2-225ENST00000640900 SPRR2FQ96RM1 72 aa3.39□□□□□ -1.87
SCARB2-225ENST00000640900 MDN1Q9NU22 5596 aa3.39□□□□□ -1.87
SCARB2-225ENST00000640900 KRTAP19-5Q3LI72 72 aa3.38□□□□□ -1.87
SCARB2-225ENST00000640900 MT1EP04732 61 aa3.37□□□□□ -1.87
SCARB2-225ENST00000640900 KTN1-AS1Q86SY8 53 aa3.35□□□□□ -1.87
SCARB2-225ENST00000640900 PP632Q6XCG6 107 aa3.33□□□□□ -1.88
SCARB2-225ENST00000640900 NEBP20929 6669 aa3.32□□□□□ -1.88
SCARB2-225ENST00000640900 KRTAP12-3P60328 96 aa3.31□□□□□ -1.88
SCARB2-225ENST00000640900 PRAC1Q96KF2 57 aa3.31□□□□□ -1.88
SCARB2-225ENST00000640900 SPRR2EP22531 72 aa3.27□□□□□ -1.89
SCARB2-225ENST00000640900 SPRR2BP35325 72 aa3.27□□□□□ -1.89
SCARB2-225ENST00000640900 SPRR2AP35326 72 aa3.27□□□□□ -1.89
SCARB2-225ENST00000640900 KRTAP19-3Q7Z4W3 81 aa3.27□□□□□ -1.89
SCARB2-225ENST00000640900 MT1LQ93083 61 aa3.27□□□□□ -1.89
SCARB2-225ENST00000640900 LCE1EQ5T753 118 aa3.26□□□□□ -1.89
SCARB2-225ENST00000640900 MT1GP13640 62 aa3.23□□□□□ -1.89
SCARB2-225ENST00000640900 MT1MQ8N339 61 aa3.18□□□□□ -1.9
SCARB2-225ENST00000640900 SPRR2DP22532 72 aa3.15□□□□□ -1.91
SCARB2-225ENST00000640900 KRTAP5-11Q6L8G4 156 aa3.11□□□□□ -1.91
SCARB2-225ENST00000640900 KRTAP2-3P0C7H8 128 aa3.1□□□□□ -1.91
SCARB2-225ENST00000640900 KRTAP2-4Q9BYR9 128 aa3.1□□□□□ -1.91
SCARB2-225ENST00000640900 LCE3CQ5T5A8 94 aa3.09□□□□□ -1.91
SCARB2-225ENST00000640900 LCE1FQ5T754 118 aa3.08□□□□□ -1.92
SCARB2-225ENST00000640900 KRTAP20-1Q3LI63 56 aa3.07□□□□□ -1.92
SCARB2-225ENST00000640900 KRTAP4-3Q9BYR4 195 aa3.07□□□□□ -1.92
SCARB2-225ENST00000640900 KRTAP2-1Q9BYU5 128 aa3.02□□□□□ -1.93
SCARB2-225ENST00000640900 DSTQ03001 7570 aaKnown RBP3.01□□□□□ -1.93
SCARB2-225ENST00000640900 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.99□□□□□ -1.93
SCARB2-225ENST00000640900 KRTAP9-6A8MVA2 160 aa2.95□□□□□ -1.94
SCARB2-225ENST00000640900 KRTAP5-5Q701N2 237 aaPredicted RBP2.95□□□□□ -1.94
SCARB2-225ENST00000640900 SPRR5A0A1B0GTR4 108 aa2.94□□□□□ -1.94
SCARB2-225ENST00000640900 KRTAP5-4Q6L8H1 288 aa2.91□□□□□ -1.94
SCARB2-225ENST00000640900 LUZP6Q538Z0 58 aa2.79□□□□□ -1.96
SCARB2-225ENST00000640900 MT1AP04731 61 aa2.78□□□□□ -1.96
SCARB2-225ENST00000640900 HMCN1Q96RW7 5635 aa2.77□□□□□ -1.97
SCARB2-225ENST00000640900 SYNE1Q8NF91 8797 aaKnown RBP2.75□□□□□ -1.97
SCARB2-225ENST00000640900 KRTAP6-1Q3LI64 71 aa2.75□□□□□ -1.97
SCARB2-225ENST00000640900 MT4P47944 62 aa2.71□□□□□ -1.98
SCARB2-225ENST00000640900 KRTAP12-4P60329 112 aa2.71□□□□□ -1.98
SCARB2-225ENST00000640900 LCE3EQ5T5B0 92 aa2.69□□□□□ -1.98
SCARB2-225ENST00000640900 KRTAP20-2Q3LI61 65 aa2.68□□□□□ -1.98
SCARB2-225ENST00000640900 KRTAP5-1Q6L8H4 278 aa2.66□□□□□ -1.98
SCARB2-225ENST00000640900 KRTAP5-2Q701N4 177 aa2.62□□□□□ -1.99
SCARB2-225ENST00000640900 AHNAK2Q8IVF2 5795 aa2.58□□□□□ -2
SCARB2-225ENST00000640900 KRTAP6-2Q3LI66 62 aa2.55□□□□□ -2
SCARB2-225ENST00000640900 KRTAP4-4Q9BYR3 166 aa2.5□□□□□ -2.01
SCARB2-225ENST00000640900 KRTAP5-10Q6L8G5 202 aa2.46□□□□□ -2.02
SCARB2-225ENST00000640900 GPR98Q8WXG9 6306 aa2.46□□□□□ -2.02
SCARB2-225ENST00000640900 OBSCNQ5VST9 7968 aa2.35□□□□□ -2.03
SCARB2-225ENST00000640900 KRTAP5-7Q6L8G8 165 aa2.32□□□□□ -2.04
SCARB2-225ENST00000640900 KRTAP5-8O75690 187 aa2.31□□□□□ -2.04
SCARB2-225ENST00000640900 LCE3DQ9BYE3 92 aa2.27□□□□□ -2.05
SCARB2-225ENST00000640900 INE1O15225 51 aa2.24□□□□□ -2.05
SCARB2-225ENST00000640900 MUC5ACP98088 5654 aa2.24□□□□□ -2.05
SCARB2-225ENST00000640900 LCE1CQ5T751 118 aa2.15□□□□□ -2.07
SCARB2-225ENST00000640900 LCE1BQ5T7P3 118 aa2.15□□□□□ -2.07
SCARB2-225ENST00000640900 MUC5BQ9HC84 5762 aaPredicted RBP2.06□□□□□ -2.08
SCARB2-225ENST00000640900 AHNAKQ09666 5890 aaKnown RBP2.03□□□□□ -2.08
SCARB2-225ENST00000640900 KRTAP21-2Q3LI59 83 aa1.84□□□□□ -2.11
SCARB2-225ENST00000640900 PRM1P04553 51 aa1.79□□□□□ -2.12
SCARB2-225ENST00000640900 MUC19Q7Z5P9 8384 aa1.7□□□□□ -2.14
SCARB2-225ENST00000640900 PHGR1C9JFL3 82 aa1.63□□□□□ -2.15
SCARB2-225ENST00000640900 KRTAP21-1Q3LI58 79 aa1.11□□□□□ -2.23
SCARB2-225ENST00000640900 MUC16Q8WXI7 14507 aa1.09□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 67.9 ms