RNA–Protein interactions for RNA: ENST00000640613.1

PAX6-274, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 1,525 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-274ENST00000640613 KRTAP10-7P60409 375 aaPredicted RBP3.9□□□□□ -1.79
PAX6-274ENST00000640613 KRTAP10-5P60370 271 aa3.88□□□□□ -1.79
PAX6-274ENST00000640613 MT1XP80297 61 aa3.88□□□□□ -1.79
PAX6-274ENST00000640613 USH2AO75445 5202 aa3.85□□□□□ -1.79
PAX6-274ENST00000640613 KRTAP23-1A1A580 65 aa3.85□□□□□ -1.79
PAX6-274ENST00000640613 SPRR5A0A1B0GTR4 108 aa3.84□□□□□ -1.8
PAX6-274ENST00000640613 SSPOA2VEC9 5147 aa3.75□□□□□ -1.81
PAX6-274ENST00000640613 KRTAP19-6Q3LI70 58 aa3.75□□□□□ -1.81
PAX6-274ENST00000640613 KRTAP10-12P60413 245 aa3.73□□□□□ -1.81
PAX6-274ENST00000640613 LCE3AQ5TA76 89 aa3.73□□□□□ -1.81
PAX6-274ENST00000640613 LCE1AQ5T7P2 110 aa3.7□□□□□ -1.82
PAX6-274ENST00000640613 KRTAP8-1Q8IUC2 63 aa3.66□□□□□ -1.82
PAX6-274ENST00000640613 FCGBPQ9Y6R7 5405 aaPredicted RBP3.64□□□□□ -1.83
PAX6-274ENST00000640613 LCE1EQ5T753 118 aa3.6□□□□□ -1.83
PAX6-274ENST00000640613 KRTAP12-3P60328 96 aa3.59□□□□□ -1.84
PAX6-274ENST00000640613 KRTAP2-2Q9BYT5 123 aa3.54□□□□□ -1.84
PAX6-274ENST00000640613 KRTAP19-5Q3LI72 72 aa3.53□□□□□ -1.84
PAX6-274ENST00000640613 KRTAP5-1Q6L8H4 278 aa3.51□□□□□ -1.85
PAX6-274ENST00000640613 KMT2DO14686 5537 aa3.49□□□□□ -1.85
PAX6-274ENST00000640613 MACF1Q9UPN3 7388 aaKnown RBP3.48□□□□□ -1.85
PAX6-274ENST00000640613 KRTAP19-7Q3SYF9 63 aa3.46□□□□□ -1.86
PAX6-274ENST00000640613 SYNE2Q8WXH0 6885 aaKnown RBP3.45□□□□□ -1.86
PAX6-274ENST00000640613 KRTAP5-9P26371 169 aa3.44□□□□□ -1.86
PAX6-274ENST00000640613 KRTAP5-4Q6L8H1 288 aa3.43□□□□□ -1.86
PAX6-274ENST00000640613 KRTAP6-3Q3LI67 103 aa3.42□□□□□ -1.86
PAX6-274ENST00000640613 MT1EP04732 61 aa3.4□□□□□ -1.86
PAX6-274ENST00000640613 KRTAP4-4Q9BYR3 166 aa3.4□□□□□ -1.86
PAX6-274ENST00000640613 NEBP20929 6669 aa3.39□□□□□ -1.87
PAX6-274ENST00000640613 KRTAP20-1Q3LI63 56 aa3.39□□□□□ -1.87
PAX6-274ENST00000640613 MT1LQ93083 61 aa3.35□□□□□ -1.87
PAX6-274ENST00000640613 LCE3CQ5T5A8 94 aa3.34□□□□□ -1.87
PAX6-274ENST00000640613 SPRR2FQ96RM1 72 aa3.34□□□□□ -1.87
PAX6-274ENST00000640613 KRTAP19-3Q7Z4W3 81 aa3.27□□□□□ -1.89
PAX6-274ENST00000640613 MT1GP13640 62 aa3.24□□□□□ -1.89
PAX6-274ENST00000640613 MUC12Q9UKN1 5478 aa3.23□□□□□ -1.89
PAX6-274ENST00000640613 MDN1Q9NU22 5596 aa3.22□□□□□ -1.89
PAX6-274ENST00000640613 SPRR2EP22531 72 aa3.21□□□□□ -1.9
PAX6-274ENST00000640613 SPRR2BP35325 72 aa3.21□□□□□ -1.9
PAX6-274ENST00000640613 SPRR2AP35326 72 aa3.21□□□□□ -1.9
PAX6-274ENST00000640613 MT1MQ8N339 61 aa3.2□□□□□ -1.9
PAX6-274ENST00000640613 GPR98Q8WXG9 6306 aa3.19□□□□□ -1.9
PAX6-274ENST00000640613 KRTAP2-3P0C7H8 128 aa3.19□□□□□ -1.9
PAX6-274ENST00000640613 KRTAP2-4Q9BYR9 128 aa3.19□□□□□ -1.9
PAX6-274ENST00000640613 KRTAP9-6A8MVA2 160 aa3.17□□□□□ -1.9
PAX6-274ENST00000640613 KRTAP4-3Q9BYR4 195 aa3.13□□□□□ -1.91
PAX6-274ENST00000640613 SPRR2DP22532 72 aa3.1□□□□□ -1.91
PAX6-274ENST00000640613 KRTAP2-1Q9BYU5 128 aa3.04□□□□□ -1.92
PAX6-274ENST00000640613 OBSCNQ5VST9 7968 aa3.02□□□□□ -1.93
PAX6-274ENST00000640613 MT3P25713 68 aa3□□□□□ -1.93
PAX6-274ENST00000640613 DSTQ03001 7570 aaKnown RBP3□□□□□ -1.93
PAX6-274ENST00000640613 KRTAP5-2Q701N4 177 aa2.89□□□□□ -1.95
PAX6-274ENST00000640613 KRTAP5-5Q701N2 237 aaPredicted RBP2.88□□□□□ -1.95
PAX6-274ENST00000640613 MT1AP04731 61 aa2.86□□□□□ -1.95
PAX6-274ENST00000640613 KRTAP6-1Q3LI64 71 aa2.82□□□□□ -1.96
PAX6-274ENST00000640613 KRTAP5-10Q6L8G5 202 aa2.71□□□□□ -1.98
PAX6-274ENST00000640613 KRTAP5-7Q6L8G8 165 aa2.7□□□□□ -1.98
PAX6-274ENST00000640613 AHNAK2Q8IVF2 5795 aa2.7□□□□□ -1.98
PAX6-274ENST00000640613 SYNE1Q8NF91 8797 aaKnown RBP2.7□□□□□ -1.98
PAX6-274ENST00000640613 MT4P47944 62 aa2.68□□□□□ -1.98
PAX6-274ENST00000640613 KRTAP12-4P60329 112 aa2.68□□□□□ -1.98
PAX6-274ENST00000640613 LCE1FQ5T754 118 aa2.63□□□□□ -1.99
PAX6-274ENST00000640613 HMCN1Q96RW7 5635 aa2.63□□□□□ -1.99
PAX6-274ENST00000640613 KRTAP20-2Q3LI61 65 aa2.58□□□□□ -2
PAX6-274ENST00000640613 KRTAP6-2Q3LI66 62 aa2.58□□□□□ -2
PAX6-274ENST00000640613 LCE3DQ9BYE3 92 aa2.53□□□□□ -2
PAX6-274ENST00000640613 LCE3EQ5T5B0 92 aa2.47□□□□□ -2.01
PAX6-274ENST00000640613 AHNAKQ09666 5890 aaKnown RBP2.46□□□□□ -2.02
PAX6-274ENST00000640613 KRTAP5-8O75690 187 aa2.45□□□□□ -2.02
PAX6-274ENST00000640613 PRM1P04553 51 aa2.39□□□□□ -2.03
PAX6-274ENST00000640613 MUC5BQ9HC84 5762 aaPredicted RBP2.37□□□□□ -2.03
PAX6-274ENST00000640613 MUC5ACP98088 5654 aa2.34□□□□□ -2.04
PAX6-274ENST00000640613 LCE1CQ5T751 118 aa2.31□□□□□ -2.04
PAX6-274ENST00000640613 LCE1BQ5T7P3 118 aa2.31□□□□□ -2.04
PAX6-274ENST00000640613 MUC19Q7Z5P9 8384 aa1.96□□□□□ -2.1
PAX6-274ENST00000640613 KRTAP21-2Q3LI59 83 aa1.83□□□□□ -2.12
PAX6-274ENST00000640613 KRTAP21-1Q3LI58 79 aa1.66□□□□□ -2.14
PAX6-274ENST00000640613 PHGR1C9JFL3 82 aa1.56□□□□□ -2.16
PAX6-274ENST00000640613 MUC16Q8WXI7 14507 aa1.04□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 126.9 ms