RNA–Protein interactions for RNA: ENST00000640568.1

TSPAN9-208, Transcript of tetraspanin 9, humanhuman

TSL 5

Gene TSPAN9, Length 1,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-208ENST00000640568 KRTAP12-3P60328 96 aa7.86□□□□□ -1.15
TSPAN9-208ENST00000640568 PP632Q6XCG6 107 aa7.85□□□□□ -1.15
TSPAN9-208ENST00000640568 KRTAP19-3Q7Z4W3 81 aa7.78□□□□□ -1.16
TSPAN9-208ENST00000640568 SPRR2DP22532 72 aa7.73□□□□□ -1.17
TSPAN9-208ENST00000640568 MT1LQ93083 61 aa7.7□□□□□ -1.18
TSPAN9-208ENST00000640568 LCE5AQ5TCM9 118 aa7.68□□□□□ -1.18
TSPAN9-208ENST00000640568 MT1GP13640 62 aa7.66□□□□□ -1.18
TSPAN9-208ENST00000640568 KRTAP20-1Q3LI63 56 aa7.65□□□□□ -1.18
TSPAN9-208ENST00000640568 KRTAP15-1Q3LI76 137 aa7.55□□□□□ -1.2
TSPAN9-208ENST00000640568 KRTAP2-3P0C7H8 128 aa7.53□□□□□ -1.2
TSPAN9-208ENST00000640568 MT1MQ8N339 61 aa7.53□□□□□ -1.2
TSPAN9-208ENST00000640568 KRTAP2-4Q9BYR9 128 aa7.53□□□□□ -1.2
TSPAN9-208ENST00000640568 KTN1-AS1Q86SY8 53 aa7.51□□□□□ -1.21
TSPAN9-208ENST00000640568 LCE3BQ5TA77 95 aa7.46□□□□□ -1.22
TSPAN9-208ENST00000640568 PRAC1Q96KF2 57 aa7.46□□□□□ -1.22
TSPAN9-208ENST00000640568 SVIPQ8NHG7 77 aa7.44□□□□□ -1.22
TSPAN9-208ENST00000640568 KRTAP19-4Q3LI73 84 aa7.43□□□□□ -1.22
TSPAN9-208ENST00000640568 KRTAP4-7Q9BYR0 210 aa7.35□□□□□ -1.23
TSPAN9-208ENST00000640568 KRTAP2-2Q9BYT5 123 aa7.33□□□□□ -1.24
TSPAN9-208ENST00000640568 KRTAP2-1Q9BYU5 128 aa7.33□□□□□ -1.24
TSPAN9-208ENST00000640568 KRTAP4-3Q9BYR4 195 aa7.32□□□□□ -1.24
TSPAN9-208ENST00000640568 DSTQ03001 7570 aaKnown RBP7.32□□□□□ -1.24
TSPAN9-208ENST00000640568 LCE3CQ5T5A8 94 aa7.28□□□□□ -1.24
TSPAN9-208ENST00000640568 LOC100996750A0A140TA64 210 aa6.94□□□□□ -1.3
TSPAN9-208ENST00000640568 LCE4AQ5TA78 99 aa6.85□□□□□ -1.31
TSPAN9-208ENST00000640568 KRTAP5-5Q701N2 237 aaPredicted RBP6.81□□□□□ -1.32
TSPAN9-208ENST00000640568 KRTAP9-6A8MVA2 160 aa6.8□□□□□ -1.32
TSPAN9-208ENST00000640568 KRTAP5-4Q6L8H1 288 aa6.79□□□□□ -1.32
TSPAN9-208ENST00000640568 KRTAP4-9Q9BYQ8 210 aa6.76□□□□□ -1.33
TSPAN9-208ENST00000640568 MT4P47944 62 aa6.72□□□□□ -1.33
TSPAN9-208ENST00000640568 LCE1DQ5T752 114 aa6.67□□□□□ -1.34
TSPAN9-208ENST00000640568 SPRR5A0A1B0GTR4 108 aa6.62□□□□□ -1.35
TSPAN9-208ENST00000640568 MT1AP04731 61 aa6.57□□□□□ -1.36
TSPAN9-208ENST00000640568 KRTAP12-4P60329 112 aa6.56□□□□□ -1.36
TSPAN9-208ENST00000640568 KRTAP4-6Q9BYQ5 205 aa6.54□□□□□ -1.36
TSPAN9-208ENST00000640568 HMCN1Q96RW7 5635 aa6.5□□□□□ -1.37
TSPAN9-208ENST00000640568 SYNE1Q8NF91 8797 aaKnown RBP6.49□□□□□ -1.37
TSPAN9-208ENST00000640568 KRTAP6-1Q3LI64 71 aa6.48□□□□□ -1.37
TSPAN9-208ENST00000640568 KRTAP20-2Q3LI61 65 aa6.4□□□□□ -1.39
TSPAN9-208ENST00000640568 KRTAP9-4Q9BYQ2 154 aa6.28□□□□□ -1.4
TSPAN9-208ENST00000640568 LUZP6Q538Z0 58 aa6.24□□□□□ -1.41
TSPAN9-208ENST00000640568 GPR98Q8WXG9 6306 aa6.23□□□□□ -1.41
TSPAN9-208ENST00000640568 KRTAP5-3Q6L8H2 238 aa6.15□□□□□ -1.42
TSPAN9-208ENST00000640568 KRTAP6-2Q3LI66 62 aa6.09□□□□□ -1.44
TSPAN9-208ENST00000640568 KRTAP5-2Q701N4 177 aa6.05□□□□□ -1.44
TSPAN9-208ENST00000640568 AHNAK2Q8IVF2 5795 aa6.04□□□□□ -1.44
TSPAN9-208ENST00000640568 MT3P25713 68 aa6□□□□□ -1.45
TSPAN9-208ENST00000640568 KRTAP5-10Q6L8G5 202 aa5.97□□□□□ -1.45
TSPAN9-208ENST00000640568 NDUFAF8A1L188 74 aa5.81□□□□□ -1.48
TSPAN9-208ENST00000640568 KRTAP5-7Q6L8G8 165 aa5.74□□□□□ -1.49
TSPAN9-208ENST00000640568 KRTAP4-11Q9BYQ6 195 aa5.69□□□□□ -1.5
TSPAN9-208ENST00000640568 OBSCNQ5VST9 7968 aa5.56□□□□□ -1.52
TSPAN9-208ENST00000640568 KRTAP5-8O75690 187 aa5.46□□□□□ -1.53
TSPAN9-208ENST00000640568 LCE3DQ9BYE3 92 aa5.39□□□□□ -1.55
TSPAN9-208ENST00000640568 LCE1EQ5T753 118 aa5.32□□□□□ -1.56
TSPAN9-208ENST00000640568 KRTAP5-1Q6L8H4 278 aa5.32□□□□□ -1.56
TSPAN9-208ENST00000640568 A0A0A0MQY5 61 aa5.18□□□□□ -1.58
TSPAN9-208ENST00000640568 LCE3EQ5T5B0 92 aa5.18□□□□□ -1.58
TSPAN9-208ENST00000640568 MUC5ACP98088 5654 aa5.15□□□□□ -1.58
TSPAN9-208ENST00000640568 H3BS24 57 aa5.13□□□□□ -1.59
TSPAN9-208ENST00000640568 KRTAP9-9Q9BYP9 154 aa5.13□□□□□ -1.59
TSPAN9-208ENST00000640568 LCE1BQ5T7P3 118 aa5.03□□□□□ -1.6
TSPAN9-208ENST00000640568 MUC5BQ9HC84 5762 aaPredicted RBP4.96□□□□□ -1.62
TSPAN9-208ENST00000640568 KRTAP4-2Q9BYR5 136 aa4.96□□□□□ -1.62
TSPAN9-208ENST00000640568 LCE1CQ5T751 118 aa4.94□□□□□ -1.62
TSPAN9-208ENST00000640568 AHNAKQ09666 5890 aaKnown RBP4.88□□□□□ -1.63
TSPAN9-208ENST00000640568 INE1O15225 51 aa4.84□□□□□ -1.63
TSPAN9-208ENST00000640568 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.56□□□□□ -1.68
TSPAN9-208ENST00000640568 KRTAP5-11Q6L8G4 156 aa4.43□□□□□ -1.7
TSPAN9-208ENST00000640568 KRTAP4-12Q9BQ66 201 aa4.3□□□□□ -1.72
TSPAN9-208ENST00000640568 PRM1P04553 51 aa4.24□□□□□ -1.73
TSPAN9-208ENST00000640568 KRTAP21-2Q3LI59 83 aa4.24□□□□□ -1.73
TSPAN9-208ENST00000640568 LCE1FQ5T754 118 aa4.17□□□□□ -1.74
TSPAN9-208ENST00000640568 KRTAP4-4Q9BYR3 166 aa3.83□□□□□ -1.8
TSPAN9-208ENST00000640568 PHGR1C9JFL3 82 aa3.79□□□□□ -1.8
TSPAN9-208ENST00000640568 MUC19Q7Z5P9 8384 aa3.38□□□□□ -1.87
TSPAN9-208ENST00000640568 KRTAP21-1Q3LI58 79 aa2.65□□□□□ -1.99
TSPAN9-208ENST00000640568 MUC16Q8WXI7 14507 aa2.39□□□□□ -2.03
Retrieved 78 of 20,778 RNA–protein pairs in 502.9 ms