RNA–Protein interactions for RNA: ENST00000640440.1

HNRNPU-229, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 3

Gene HNRNPU, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-229ENST00000640440 KRTAP12-1P59990 96 aa5.45□□□□□ -1.54
HNRNPU-229ENST00000640440 V9GYY9 64 aa5.43□□□□□ -1.54
HNRNPU-229ENST00000640440 Q1T7F1 81 aa5.42□□□□□ -1.54
HNRNPU-229ENST00000640440 A8MU10 97 aa5.41□□□□□ -1.54
HNRNPU-229ENST00000640440 KRTAP19-7Q3SYF9 63 aa5.41□□□□□ -1.54
HNRNPU-229ENST00000640440 SPINT4Q6UDR6 99 aa5.41□□□□□ -1.54
HNRNPU-229ENST00000640440 RPS28P62857 69 aaKnown RBP5.4□□□□□ -1.54
HNRNPU-229ENST00000640440 UQCR11O14957 56 aa5.39□□□□□ -1.55
HNRNPU-229ENST00000640440 MT1EP04732 61 aa5.38□□□□□ -1.55
HNRNPU-229ENST00000640440 KRTAP19-3Q7Z4W3 81 aa5.34□□□□□ -1.55
HNRNPU-229ENST00000640440 DSTQ03001 7570 aaKnown RBP5.33□□□□□ -1.56
HNRNPU-229ENST00000640440 PSPHP1O15172 72 aa5.32□□□□□ -1.56
HNRNPU-229ENST00000640440 MIR22HGQ0VDD5 57 aa5.28□□□□□ -1.56
HNRNPU-229ENST00000640440 KRTAP19-5Q3LI72 72 aa5.28□□□□□ -1.56
HNRNPU-229ENST00000640440 MT1GP13640 62 aa5.19□□□□□ -1.58
HNRNPU-229ENST00000640440 C10orf95Q9H7T3 257 aa5.19□□□□□ -1.58
HNRNPU-229ENST00000640440 A6NED7 52 aa5.16□□□□□ -1.58
HNRNPU-229ENST00000640440 PP632Q6XCG6 107 aa5.15□□□□□ -1.59
HNRNPU-229ENST00000640440 KRTAP5-3Q6L8H2 238 aa5.14□□□□□ -1.59
HNRNPU-229ENST00000640440 LCE3AQ5TA76 89 aa5.13□□□□□ -1.59
HNRNPU-229ENST00000640440 MT1LQ93083 61 aa5.13□□□□□ -1.59
HNRNPU-229ENST00000640440 TNP1P09430 55 aa5.12□□□□□ -1.59
HNRNPU-229ENST00000640440 MT1MQ8N339 61 aa5.12□□□□□ -1.59
HNRNPU-229ENST00000640440 K7ERS5 55 aa5.11□□□□□ -1.59
HNRNPU-229ENST00000640440 KRTAP4-3Q9BYR4 195 aa5.02□□□□□ -1.61
HNRNPU-229ENST00000640440 CDC42SE1Q9NRR8 79 aa5.02□□□□□ -1.61
HNRNPU-229ENST00000640440 MT4P47944 62 aa4.99□□□□□ -1.61
HNRNPU-229ENST00000640440 KRTAP25-1Q3LHN0 102 aa4.97□□□□□ -1.61
HNRNPU-229ENST00000640440 HMCN1Q96RW7 5635 aa4.95□□□□□ -1.62
HNRNPU-229ENST00000640440 KRTAP12-3P60328 96 aa4.93□□□□□ -1.62
HNRNPU-229ENST00000640440 SVIPQ8NHG7 77 aa4.93□□□□□ -1.62
HNRNPU-229ENST00000640440 KRTAP5-4Q6L8H1 288 aa4.9□□□□□ -1.63
HNRNPU-229ENST00000640440 ROMO1P60602 79 aa4.85□□□□□ -1.63
HNRNPU-229ENST00000640440 AHNAK2Q8IVF2 5795 aa4.82□□□□□ -1.64
HNRNPU-229ENST00000640440 BRK1Q8WUW1 75 aa4.73□□□□□ -1.65
HNRNPU-229ENST00000640440 KRTAP5-10Q6L8G5 202 aa4.71□□□□□ -1.66
HNRNPU-229ENST00000640440 KRTAP5-5Q701N2 237 aaPredicted RBP4.69□□□□□ -1.66
HNRNPU-229ENST00000640440 KRTAP20-2Q3LI61 65 aa4.64□□□□□ -1.67
HNRNPU-229ENST00000640440 KRTAP5-7Q6L8G8 165 aa4.63□□□□□ -1.67
HNRNPU-229ENST00000640440 A0A0A0MQY5 61 aa4.62□□□□□ -1.67
HNRNPU-229ENST00000640440 SPRR5A0A1B0GTR4 108 aa4.61□□□□□ -1.67
HNRNPU-229ENST00000640440 KRTAP12-4P60329 112 aa4.58□□□□□ -1.68
HNRNPU-229ENST00000640440 SYNE1Q8NF91 8797 aaKnown RBP4.56□□□□□ -1.68
HNRNPU-229ENST00000640440 LCE3CQ5T5A8 94 aa4.52□□□□□ -1.69
HNRNPU-229ENST00000640440 PMAIP1Q13794 54 aa4.46□□□□□ -1.7
HNRNPU-229ENST00000640440 PRO0628Q9UI54 55 aa4.4□□□□□ -1.71
HNRNPU-229ENST00000640440 MT1AP04731 61 aa4.36□□□□□ -1.71
HNRNPU-229ENST00000640440 KRTAP6-1Q3LI64 71 aa4.34□□□□□ -1.71
HNRNPU-229ENST00000640440 MT3P25713 68 aa4.31□□□□□ -1.72
HNRNPU-229ENST00000640440 KRTAP5-2Q701N4 177 aa4.29□□□□□ -1.72
HNRNPU-229ENST00000640440 KRTAP9-6A8MVA2 160 aa4.28□□□□□ -1.72
HNRNPU-229ENST00000640440 PRAC1Q96KF2 57 aa4.22□□□□□ -1.73
HNRNPU-229ENST00000640440 AHNAKQ09666 5890 aaKnown RBP4.2□□□□□ -1.74
HNRNPU-229ENST00000640440 KRTAP6-2Q3LI66 62 aa4.17□□□□□ -1.74
HNRNPU-229ENST00000640440 KTN1-AS1Q86SY8 53 aa4.14□□□□□ -1.75
HNRNPU-229ENST00000640440 KRTAP5-8O75690 187 aa4.1□□□□□ -1.75
HNRNPU-229ENST00000640440 MUC5ACP98088 5654 aa4.08□□□□□ -1.76
HNRNPU-229ENST00000640440 LCE1EQ5T753 118 aa4.08□□□□□ -1.76
HNRNPU-229ENST00000640440 KRTAP5-11Q6L8G4 156 aa4.08□□□□□ -1.76
HNRNPU-229ENST00000640440 MUC5BQ9HC84 5762 aaPredicted RBP4.03□□□□□ -1.76
HNRNPU-229ENST00000640440 OBSCNQ5VST9 7968 aa4.03□□□□□ -1.76
HNRNPU-229ENST00000640440 LCE1FQ5T754 118 aa3.96□□□□□ -1.78
HNRNPU-229ENST00000640440 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.96□□□□□ -1.78
HNRNPU-229ENST00000640440 KRTAP5-1Q6L8H4 278 aa3.85□□□□□ -1.79
HNRNPU-229ENST00000640440 NDUFAF8A1L188 74 aa3.73□□□□□ -1.81
HNRNPU-229ENST00000640440 LUZP6Q538Z0 58 aa3.52□□□□□ -1.85
HNRNPU-229ENST00000640440 LCE1BQ5T7P3 118 aa3.49□□□□□ -1.85
HNRNPU-229ENST00000640440 LCE1CQ5T751 118 aa3.39□□□□□ -1.87
HNRNPU-229ENST00000640440 LCE3EQ5T5B0 92 aa3.37□□□□□ -1.87
HNRNPU-229ENST00000640440 KRTAP4-4Q9BYR3 166 aa3.28□□□□□ -1.88
HNRNPU-229ENST00000640440 LCE3DQ9BYE3 92 aa3.26□□□□□ -1.89
HNRNPU-229ENST00000640440 KRTAP21-2Q3LI59 83 aa2.85□□□□□ -1.95
HNRNPU-229ENST00000640440 PHGR1C9JFL3 82 aa2.79□□□□□ -1.96
HNRNPU-229ENST00000640440 INE1O15225 51 aa2.55□□□□□ -2
HNRNPU-229ENST00000640440 MUC19Q7Z5P9 8384 aa2.51□□□□□ -2.01
HNRNPU-229ENST00000640440 PRM1P04553 51 aa2.48□□□□□ -2.01
HNRNPU-229ENST00000640440 KRTAP21-1Q3LI58 79 aa2.11□□□□□ -2.07
HNRNPU-229ENST00000640440 MUC16Q8WXI7 14507 aa1.79□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 10.9 ms