RNA–Protein interactions for RNA: ENST00000640251.1

PAX6-267, Transcript of paired box 6, human

TSL 5

Gene PAX6, Length 649 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAX6-267	ENST00000640251	LCE3D	Q9BYE3	92 aa		3.33	□□□□□ -1.88
PAX6-267	ENST00000640251		A0A0D9SG42	100 aa		3.3	□□□□□ -1.88
PAX6-267	ENST00000640251	KRTAP25-1	Q3LHN0	102 aa		3.29	□□□□□ -1.88
PAX6-267	ENST00000640251		P0C880	135 aa		3.28	□□□□□ -1.88
PAX6-267	ENST00000640251	MT2A	P02795	61 aa		3.27	□□□□□ -1.89
PAX6-267	ENST00000640251	MT1F	P04733	61 aa		3.26	□□□□□ -1.89
PAX6-267	ENST00000640251	CRIPT	Q9P021	101 aa		3.26	□□□□□ -1.89
PAX6-267	ENST00000640251		R4GN34	69 aa		3.25	□□□□□ -1.89
PAX6-267	ENST00000640251	KRTAP13-4	Q3LI77	160 aa		3.24	□□□□□ -1.89
PAX6-267	ENST00000640251	SPINT4	Q6UDR6	99 aa		3.24	□□□□□ -1.89
PAX6-267	ENST00000640251	PP632	Q6XCG6	107 aa		3.23	□□□□□ -1.89
PAX6-267	ENST00000640251	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	3.23	□□□□□ -1.89
PAX6-267	ENST00000640251	LCE1C	Q5T751	118 aa		3.2	□□□□□ -1.9
PAX6-267	ENST00000640251	LCE1B	Q5T7P3	118 aa		3.2	□□□□□ -1.9
PAX6-267	ENST00000640251	KRTAP12-1	P59990	96 aa		3.19	□□□□□ -1.9
PAX6-267	ENST00000640251	KRTAP10-10	P60014	251 aa		3.19	□□□□□ -1.9
PAX6-267	ENST00000640251	KRTAP5-2	Q701N4	177 aa		3.13	□□□□□ -1.91
PAX6-267	ENST00000640251	CAMK2N1	Q7Z7J9	78 aa		3.1	□□□□□ -1.91
PAX6-267	ENST00000640251	MACF1	Q9UPN3	7388 aa	Known RBP	3.1	□□□□□ -1.91
PAX6-267	ENST00000640251	SYNE2	Q8WXH0	6885 aa	Known RBP	3.09	□□□□□ -1.91
PAX6-267	ENST00000640251	KRTAP19-6	Q3LI70	58 aa		3.07	□□□□□ -1.92
PAX6-267	ENST00000640251	C10orf95	Q9H7T3	257 aa		3.02	□□□□□ -1.93
PAX6-267	ENST00000640251	PLAC4	Q8WY50	150 aa		3.01	□□□□□ -1.93
PAX6-267	ENST00000640251	SPRR5	A0A1B0GTR4	108 aa		2.98	□□□□□ -1.93
PAX6-267	ENST00000640251	TNP1	P09430	55 aa		2.98	□□□□□ -1.93
PAX6-267	ENST00000640251	MT1B	P07438	61 aa		2.96	□□□□□ -1.94
PAX6-267	ENST00000640251	KRTAP6-3	Q3LI67	103 aa		2.96	□□□□□ -1.94
PAX6-267	ENST00000640251	SPRR2G	Q9BYE4	73 aa		2.94	□□□□□ -1.94
PAX6-267	ENST00000640251	MUC12	Q9UKN1	5478 aa		2.93	□□□□□ -1.94
PAX6-267	ENST00000640251	NEB	P20929	6669 aa		2.91	□□□□□ -1.94
PAX6-267	ENST00000640251	LUZP6	Q538Z0	58 aa		2.88	□□□□□ -1.95
PAX6-267	ENST00000640251	KRTAP19-8	Q3LI54	63 aa		2.87	□□□□□ -1.95
PAX6-267	ENST00000640251	KMT2D	O14686	5537 aa		2.84	□□□□□ -1.96
PAX6-267	ENST00000640251	KRTAP20-1	Q3LI63	56 aa		2.81	□□□□□ -1.96
PAX6-267	ENST00000640251	PRO2289	Q9P1D8	64 aa		2.81	□□□□□ -1.96
PAX6-267	ENST00000640251	MDN1	Q9NU22	5596 aa		2.79	□□□□□ -1.96
PAX6-267	ENST00000640251	MT1X	P80297	61 aa		2.75	□□□□□ -1.97
PAX6-267	ENST00000640251	SPRR2F	Q96RM1	72 aa		2.74	□□□□□ -1.97
PAX6-267	ENST00000640251	SPRR2E	P22531	72 aa		2.72	□□□□□ -1.97
PAX6-267	ENST00000640251	SPRR2B	P35325	72 aa		2.72	□□□□□ -1.97
PAX6-267	ENST00000640251	SPRR2A	P35326	72 aa		2.72	□□□□□ -1.97
PAX6-267	ENST00000640251	KRTAP8-1	Q8IUC2	63 aa		2.69	□□□□□ -1.98
PAX6-267	ENST00000640251	KRTAP2-3	P0C7H8	128 aa		2.68	□□□□□ -1.98
PAX6-267	ENST00000640251	KRTAP2-4	Q9BYR9	128 aa		2.68	□□□□□ -1.98
PAX6-267	ENST00000640251	KRTAP5-7	Q6L8G8	165 aa		2.66	□□□□□ -1.98
PAX6-267	ENST00000640251	KRTAP12-3	P60328	96 aa		2.64	□□□□□ -1.99
PAX6-267	ENST00000640251	SPRR2D	P22532	72 aa		2.62	□□□□□ -1.99
PAX6-267	ENST00000640251	KRTAP2-1	Q9BYU5	128 aa		2.59	□□□□□ -1.99
PAX6-267	ENST00000640251	MUC19	Q7Z5P9	8384 aa		2.58	□□□□□ -2
PAX6-267	ENST00000640251	KRTAP5-8	O75690	187 aa		2.55	□□□□□ -2
PAX6-267	ENST00000640251	KRTAP19-5	Q3LI72	72 aa		2.49	□□□□□ -2.01
PAX6-267	ENST00000640251	KRTAP19-7	Q3SYF9	63 aa		2.46	□□□□□ -2.02
PAX6-267	ENST00000640251	INE1	O15225	51 aa		2.45	□□□□□ -2.02
PAX6-267	ENST00000640251	GPR98	Q8WXG9	6306 aa		2.45	□□□□□ -2.02
PAX6-267	ENST00000640251	DST	Q03001	7570 aa	Known RBP	2.43	□□□□□ -2.02
PAX6-267	ENST00000640251	MT1E	P04732	61 aa		2.43	□□□□□ -2.02
PAX6-267	ENST00000640251	KRTAP19-3	Q7Z4W3	81 aa		2.39	□□□□□ -2.03
PAX6-267	ENST00000640251	KRTAP12-4	P60329	112 aa		2.37	□□□□□ -2.03
PAX6-267	ENST00000640251	MT4	P47944	62 aa		2.35	□□□□□ -2.03
PAX6-267	ENST00000640251	MT1L	Q93083	61 aa		2.33	□□□□□ -2.04
PAX6-267	ENST00000640251	MT1M	Q8N339	61 aa		2.32	□□□□□ -2.04
PAX6-267	ENST00000640251	MT1G	P13640	62 aa		2.29	□□□□□ -2.04
PAX6-267	ENST00000640251	KRTAP21-2	Q3LI59	83 aa		2.28	□□□□□ -2.04
PAX6-267	ENST00000640251	HMCN1	Q96RW7	5635 aa		2.28	□□□□□ -2.05
PAX6-267	ENST00000640251	AHNAK2	Q8IVF2	5795 aa		2.27	□□□□□ -2.05
PAX6-267	ENST00000640251	KRTAP5-10	Q6L8G5	202 aa		2.21	□□□□□ -2.06
PAX6-267	ENST00000640251	SYNE1	Q8NF91	8797 aa	Known RBP	2.13	□□□□□ -2.07
PAX6-267	ENST00000640251	KRTAP20-2	Q3LI61	65 aa		2.13	□□□□□ -2.07
PAX6-267	ENST00000640251	MT1A	P04731	61 aa		2.02	□□□□□ -2.09
PAX6-267	ENST00000640251	KRTAP6-1	Q3LI64	71 aa		1.99	□□□□□ -2.09
PAX6-267	ENST00000640251	KRTAP6-2	Q3LI66	62 aa		1.91	□□□□□ -2.1
PAX6-267	ENST00000640251	AHNAK	Q09666	5890 aa	Known RBP	1.86	□□□□□ -2.11
PAX6-267	ENST00000640251	MUC5B	Q9HC84	5762 aa	Predicted RBP	1.83	□□□□□ -2.12
PAX6-267	ENST00000640251	MUC5AC	P98088	5654 aa		1.82	□□□□□ -2.12
PAX6-267	ENST00000640251	PRM1	P04553	51 aa		1.7	□□□□□ -2.14
PAX6-267	ENST00000640251	PHGR1	C9JFL3	82 aa		1.3	□□□□□ -2.2
PAX6-267	ENST00000640251	MUC16	Q8WXI7	14507 aa		1.15	□□□□□ -2.23
PAX6-267	ENST00000640251	KRTAP21-1	Q3LI58	79 aa		1.08	□□□□□ -2.24

Retrieved 78 of 20,778 RNA–protein pairs in 92.8 ms