RNA–Protein interactions for RNA: ENST00000640099.1

NECAP1-224, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,313 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-224ENST00000640099 KRTAP10-12P60413 245 aa3.02□□□□□ -1.93
NECAP1-224ENST00000640099 SPRR5A0A1B0GTR4 108 aa2.98□□□□□ -1.93
NECAP1-224ENST00000640099 KRTAP12-3P60328 96 aa2.98□□□□□ -1.93
NECAP1-224ENST00000640099 KRTAP8-1Q8IUC2 63 aa2.98□□□□□ -1.93
NECAP1-224ENST00000640099 FSIP2Q5CZC0 6907 aa2.97□□□□□ -1.93
NECAP1-224ENST00000640099 PRO2289Q9P1D8 64 aa2.94□□□□□ -1.94
NECAP1-224ENST00000640099 KRTAP19-5Q3LI72 72 aa2.9□□□□□ -1.95
NECAP1-224ENST00000640099 SSPOA2VEC9 5147 aa2.83□□□□□ -1.96
NECAP1-224ENST00000640099 KRTAP5-3Q6L8H2 238 aa2.81□□□□□ -1.96
NECAP1-224ENST00000640099 LCE3CQ5T5A8 94 aa2.78□□□□□ -1.97
NECAP1-224ENST00000640099 KRTAP19-7Q3SYF9 63 aa2.74□□□□□ -1.97
NECAP1-224ENST00000640099 KRTAP9-6A8MVA2 160 aa2.73□□□□□ -1.97
NECAP1-224ENST00000640099 MUC12Q9UKN1 5478 aa2.72□□□□□ -1.97
NECAP1-224ENST00000640099 FCGBPQ9Y6R7 5405 aaPredicted RBP2.71□□□□□ -1.97
NECAP1-224ENST00000640099 DSTQ03001 7570 aaKnown RBP2.66□□□□□ -1.98
NECAP1-224ENST00000640099 MT1EP04732 61 aa2.66□□□□□ -1.98
NECAP1-224ENST00000640099 MT1LQ93083 61 aa2.66□□□□□ -1.98
NECAP1-224ENST00000640099 KRTAP4-3Q9BYR4 195 aa2.63□□□□□ -1.99
NECAP1-224ENST00000640099 KRTAP19-6Q3LI70 58 aa2.62□□□□□ -1.99
NECAP1-224ENST00000640099 CRCT1Q9UGL9 99 aa2.61□□□□□ -1.99
NECAP1-224ENST00000640099 INE1O15225 51 aa2.57□□□□□ -2
NECAP1-224ENST00000640099 MT1GP13640 62 aa2.56□□□□□ -2
NECAP1-224ENST00000640099 MACF1Q9UPN3 7388 aaKnown RBP2.55□□□□□ -2
NECAP1-224ENST00000640099 KRTAP2-3P0C7H8 128 aa2.51□□□□□ -2.01
NECAP1-224ENST00000640099 KRTAP2-4Q9BYR9 128 aa2.51□□□□□ -2.01
NECAP1-224ENST00000640099 KRTAP2-1Q9BYU5 128 aa2.51□□□□□ -2.01
NECAP1-224ENST00000640099 SPRR2FQ96RM1 72 aa2.51□□□□□ -2.01
NECAP1-224ENST00000640099 SYNE2Q8WXH0 6885 aaKnown RBP2.5□□□□□ -2.01
NECAP1-224ENST00000640099 MT1MQ8N339 61 aa2.5□□□□□ -2.01
NECAP1-224ENST00000640099 MDN1Q9NU22 5596 aa2.49□□□□□ -2.01
NECAP1-224ENST00000640099 KRTAP19-3Q7Z4W3 81 aa2.49□□□□□ -2.01
NECAP1-224ENST00000640099 SYNE1Q8NF91 8797 aaKnown RBP2.47□□□□□ -2.01
NECAP1-224ENST00000640099 GPR98Q8WXG9 6306 aa2.46□□□□□ -2.01
NECAP1-224ENST00000640099 LCE1AQ5T7P2 110 aa2.42□□□□□ -2.02
NECAP1-224ENST00000640099 OBSCNQ5VST9 7968 aa2.37□□□□□ -2.03
NECAP1-224ENST00000640099 KRTAP12-4P60329 112 aa2.31□□□□□ -2.04
NECAP1-224ENST00000640099 KRTAP6-1Q3LI64 71 aa2.29□□□□□ -2.04
NECAP1-224ENST00000640099 SPRR2EP22531 72 aa2.28□□□□□ -2.04
NECAP1-224ENST00000640099 SPRR2BP35325 72 aa2.28□□□□□ -2.04
NECAP1-224ENST00000640099 SPRR2AP35326 72 aa2.28□□□□□ -2.04
NECAP1-224ENST00000640099 MT3P25713 68 aa2.26□□□□□ -2.05
NECAP1-224ENST00000640099 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.22□□□□□ -2.05
NECAP1-224ENST00000640099 LCE1EQ5T753 118 aa2.22□□□□□ -2.05
NECAP1-224ENST00000640099 MT1AP04731 61 aa2.2□□□□□ -2.06
NECAP1-224ENST00000640099 KRTAP5-9P26371 169 aa2.2□□□□□ -2.06
NECAP1-224ENST00000640099 KRTAP2-2Q9BYT5 123 aa2.19□□□□□ -2.06
NECAP1-224ENST00000640099 SPRR2DP22532 72 aa2.17□□□□□ -2.06
NECAP1-224ENST00000640099 KRTAP5-5Q701N2 237 aaPredicted RBP2.15□□□□□ -2.07
NECAP1-224ENST00000640099 LCE3DQ9BYE3 92 aa2.15□□□□□ -2.07
NECAP1-224ENST00000640099 KRTAP5-11Q6L8G4 156 aa2.11□□□□□ -2.07
NECAP1-224ENST00000640099 LCE3EQ5T5B0 92 aa2.11□□□□□ -2.07
NECAP1-224ENST00000640099 KRTAP6-2Q3LI66 62 aa2.07□□□□□ -2.08
NECAP1-224ENST00000640099 PRM1P04553 51 aa2.05□□□□□ -2.08
NECAP1-224ENST00000640099 KRTAP6-3Q3LI67 103 aa2.04□□□□□ -2.08
NECAP1-224ENST00000640099 KRTAP20-1Q3LI63 56 aa2.04□□□□□ -2.08
NECAP1-224ENST00000640099 MUC5BQ9HC84 5762 aaPredicted RBP1.99□□□□□ -2.09
NECAP1-224ENST00000640099 MT4P47944 62 aa1.98□□□□□ -2.09
NECAP1-224ENST00000640099 NEBP20929 6669 aa1.97□□□□□ -2.09
NECAP1-224ENST00000640099 AHNAKQ09666 5890 aaKnown RBP1.91□□□□□ -2.1
NECAP1-224ENST00000640099 HMCN1Q96RW7 5635 aa1.89□□□□□ -2.11
NECAP1-224ENST00000640099 KRTAP5-4Q6L8H1 288 aa1.89□□□□□ -2.11
NECAP1-224ENST00000640099 KRTAP20-2Q3LI61 65 aa1.84□□□□□ -2.11
NECAP1-224ENST00000640099 KRTAP5-1Q6L8H4 278 aa1.8□□□□□ -2.12
NECAP1-224ENST00000640099 KRTAP5-7Q6L8G8 165 aa1.79□□□□□ -2.12
NECAP1-224ENST00000640099 MUC5ACP98088 5654 aa1.77□□□□□ -2.13
NECAP1-224ENST00000640099 KRTAP5-2Q701N4 177 aa1.75□□□□□ -2.13
NECAP1-224ENST00000640099 KRTAP4-4Q9BYR3 166 aa1.74□□□□□ -2.13
NECAP1-224ENST00000640099 LCE1BQ5T7P3 118 aa1.73□□□□□ -2.13
NECAP1-224ENST00000640099 LCE1FQ5T754 118 aa1.73□□□□□ -2.13
NECAP1-224ENST00000640099 AHNAK2Q8IVF2 5795 aa1.68□□□□□ -2.14
NECAP1-224ENST00000640099 KRTAP5-10Q6L8G5 202 aa1.55□□□□□ -2.16
NECAP1-224ENST00000640099 LCE1CQ5T751 118 aa1.5□□□□□ -2.17
NECAP1-224ENST00000640099 MUC19Q7Z5P9 8384 aa1.49□□□□□ -2.17
NECAP1-224ENST00000640099 KRTAP5-8O75690 187 aa1.45□□□□□ -2.18
NECAP1-224ENST00000640099 KRTAP21-2Q3LI59 83 aa1.44□□□□□ -2.18
NECAP1-224ENST00000640099 KRTAP21-1Q3LI58 79 aa1.2□□□□□ -2.22
NECAP1-224ENST00000640099 PHGR1C9JFL3 82 aa1.13□□□□□ -2.23
NECAP1-224ENST00000640099 MUC16Q8WXI7 14507 aa0.77□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 12.8 ms