RNA–Protein interactions for RNA: ENST00000639916.1

PAX6-259, Transcript of paired box 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PAX6, Length 2,622 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-259ENST00000639916 SSPOA2VEC9 5147 aa3.54□□□□□ -1.84
PAX6-259ENST00000639916 KRTAP10-5P60370 271 aa3.52□□□□□ -1.85
PAX6-259ENST00000639916 MT1XP80297 61 aa3.52□□□□□ -1.85
PAX6-259ENST00000639916 KRTAP10-12P60413 245 aa3.5□□□□□ -1.85
PAX6-259ENST00000639916 KRTAP8-1Q8IUC2 63 aa3.5□□□□□ -1.85
PAX6-259ENST00000639916 CRCT1Q9UGL9 99 aa3.45□□□□□ -1.86
PAX6-259ENST00000639916 KMT2DO14686 5537 aa3.42□□□□□ -1.86
PAX6-259ENST00000639916 KRTAP10-7P60409 375 aaPredicted RBP3.41□□□□□ -1.86
PAX6-259ENST00000639916 KRTAP12-3P60328 96 aa3.4□□□□□ -1.87
PAX6-259ENST00000639916 FCGBPQ9Y6R7 5405 aaPredicted RBP3.38□□□□□ -1.87
PAX6-259ENST00000639916 HMCN1Q96RW7 5635 aa3.31□□□□□ -1.88
PAX6-259ENST00000639916 MACF1Q9UPN3 7388 aaKnown RBP3.3□□□□□ -1.88
PAX6-259ENST00000639916 SYNE2Q8WXH0 6885 aaKnown RBP3.29□□□□□ -1.88
PAX6-259ENST00000639916 KRTAP2-3P0C7H8 128 aa3.25□□□□□ -1.89
PAX6-259ENST00000639916 KRTAP2-4Q9BYR9 128 aa3.25□□□□□ -1.89
PAX6-259ENST00000639916 KRTAP2-1Q9BYU5 128 aa3.25□□□□□ -1.89
PAX6-259ENST00000639916 KRTAP19-5Q3LI72 72 aa3.24□□□□□ -1.89
PAX6-259ENST00000639916 LCE3CQ5T5A8 94 aa3.23□□□□□ -1.89
PAX6-259ENST00000639916 KRTAP9-6A8MVA2 160 aa3.21□□□□□ -1.9
PAX6-259ENST00000639916 LCE1AQ5T7P2 110 aa3.21□□□□□ -1.9
PAX6-259ENST00000639916 KRTAP19-6Q3LI70 58 aa3.19□□□□□ -1.9
PAX6-259ENST00000639916 MUC12Q9UKN1 5478 aa3.16□□□□□ -1.9
PAX6-259ENST00000639916 KRTAP19-7Q3SYF9 63 aa3.14□□□□□ -1.91
PAX6-259ENST00000639916 MDN1Q9NU22 5596 aa3.12□□□□□ -1.91
PAX6-259ENST00000639916 MT1EP04732 61 aa3.06□□□□□ -1.92
PAX6-259ENST00000639916 DSTQ03001 7570 aaKnown RBP3.04□□□□□ -1.92
PAX6-259ENST00000639916 MT1LQ93083 61 aa3.03□□□□□ -1.92
PAX6-259ENST00000639916 KRTAP12-4P60329 112 aa3.01□□□□□ -1.93
PAX6-259ENST00000639916 KRTAP6-3Q3LI67 103 aa3□□□□□ -1.93
PAX6-259ENST00000639916 KRTAP2-2Q9BYT5 123 aa3□□□□□ -1.93
PAX6-259ENST00000639916 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.99□□□□□ -1.93
PAX6-259ENST00000639916 MT3P25713 68 aa2.96□□□□□ -1.94
PAX6-259ENST00000639916 LCE1EQ5T753 118 aa2.95□□□□□ -1.94
PAX6-259ENST00000639916 KRTAP20-1Q3LI63 56 aa2.93□□□□□ -1.94
PAX6-259ENST00000639916 KRTAP5-11Q6L8G4 156 aa2.93□□□□□ -1.94
PAX6-259ENST00000639916 KRTAP19-3Q7Z4W3 81 aa2.9□□□□□ -1.94
PAX6-259ENST00000639916 SPRR2FQ96RM1 72 aa2.9□□□□□ -1.95
PAX6-259ENST00000639916 MT1GP13640 62 aa2.89□□□□□ -1.95
PAX6-259ENST00000639916 KRTAP4-3Q9BYR4 195 aa2.88□□□□□ -1.95
PAX6-259ENST00000639916 MT1MQ8N339 61 aa2.87□□□□□ -1.95
PAX6-259ENST00000639916 OBSCNQ5VST9 7968 aa2.84□□□□□ -1.95
PAX6-259ENST00000639916 KRTAP5-9P26371 169 aa2.82□□□□□ -1.96
PAX6-259ENST00000639916 NEBP20929 6669 aa2.82□□□□□ -1.96
PAX6-259ENST00000639916 SYNE1Q8NF91 8797 aaKnown RBP2.76□□□□□ -1.97
PAX6-259ENST00000639916 SPRR2EP22531 72 aa2.75□□□□□ -1.97
PAX6-259ENST00000639916 SPRR2BP35325 72 aa2.75□□□□□ -1.97
PAX6-259ENST00000639916 SPRR2AP35326 72 aa2.75□□□□□ -1.97
PAX6-259ENST00000639916 PRM1P04553 51 aa2.73□□□□□ -1.97
PAX6-259ENST00000639916 KRTAP5-5Q701N2 237 aaPredicted RBP2.67□□□□□ -1.98
PAX6-259ENST00000639916 SPRR2DP22532 72 aa2.65□□□□□ -1.99
PAX6-259ENST00000639916 GPR98Q8WXG9 6306 aa2.63□□□□□ -1.99
PAX6-259ENST00000639916 MT1AP04731 61 aa2.58□□□□□ -2
PAX6-259ENST00000639916 LCE3EQ5T5B0 92 aa2.58□□□□□ -2
PAX6-259ENST00000639916 KRTAP6-1Q3LI64 71 aa2.57□□□□□ -2
PAX6-259ENST00000639916 LCE3DQ9BYE3 92 aa2.57□□□□□ -2
PAX6-259ENST00000639916 KRTAP5-1Q6L8H4 278 aa2.55□□□□□ -2
PAX6-259ENST00000639916 MUC5BQ9HC84 5762 aaPredicted RBP2.51□□□□□ -2.01
PAX6-259ENST00000639916 KRTAP5-4Q6L8H1 288 aa2.5□□□□□ -2.01
PAX6-259ENST00000639916 KRTAP6-2Q3LI66 62 aa2.48□□□□□ -2.01
PAX6-259ENST00000639916 LCE1FQ5T754 118 aa2.47□□□□□ -2.01
PAX6-259ENST00000639916 KRTAP4-4Q9BYR3 166 aa2.44□□□□□ -2.02
PAX6-259ENST00000639916 KRTAP5-7Q6L8G8 165 aa2.39□□□□□ -2.03
PAX6-259ENST00000639916 MT4P47944 62 aa2.39□□□□□ -2.03
PAX6-259ENST00000639916 KRTAP5-10Q6L8G5 202 aa2.33□□□□□ -2.04
PAX6-259ENST00000639916 AHNAK2Q8IVF2 5795 aa2.25□□□□□ -2.05
PAX6-259ENST00000639916 KRTAP20-2Q3LI61 65 aa2.21□□□□□ -2.06
PAX6-259ENST00000639916 AHNAKQ09666 5890 aaKnown RBP2.2□□□□□ -2.06
PAX6-259ENST00000639916 KRTAP5-2Q701N4 177 aa2.15□□□□□ -2.06
PAX6-259ENST00000639916 KRTAP5-8O75690 187 aa1.99□□□□□ -2.09
PAX6-259ENST00000639916 MUC5ACP98088 5654 aa1.95□□□□□ -2.1
PAX6-259ENST00000639916 LCE1CQ5T751 118 aa1.92□□□□□ -2.1
PAX6-259ENST00000639916 LCE1BQ5T7P3 118 aa1.92□□□□□ -2.1
PAX6-259ENST00000639916 MUC19Q7Z5P9 8384 aa1.88□□□□□ -2.11
PAX6-259ENST00000639916 KRTAP21-1Q3LI58 79 aa1.77□□□□□ -2.13
PAX6-259ENST00000639916 KRTAP21-2Q3LI59 83 aa1.67□□□□□ -2.14
PAX6-259ENST00000639916 PHGR1C9JFL3 82 aa1.37□□□□□ -2.19
PAX6-259ENST00000639916 MUC16Q8WXI7 14507 aa0.9□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 120 ms