RNA–Protein interactions for RNA: ENST00000639841.1

NECAP1-220, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 1,982 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-220ENST00000639841 OBSCNQ5VST9 7968 aa3.07□□□□□ -1.92
NECAP1-220ENST00000639841 FCGBPQ9Y6R7 5405 aaPredicted RBP3.07□□□□□ -1.92
NECAP1-220ENST00000639841 LCE3DQ9BYE3 92 aa3.06□□□□□ -1.92
NECAP1-220ENST00000639841 KRTAP4-3Q9BYR4 195 aa3.06□□□□□ -1.92
NECAP1-220ENST00000639841 MT1FP04733 61 aa3.05□□□□□ -1.92
NECAP1-220ENST00000639841 ATXN8Q156A1 80 aa3□□□□□ -1.93
NECAP1-220ENST00000639841 MUC5BQ9HC84 5762 aaPredicted RBP3□□□□□ -1.93
NECAP1-220ENST00000639841 A0A1B0GU69 56 aa3□□□□□ -1.93
NECAP1-220ENST00000639841 H0YGX0 51 aa2.98□□□□□ -1.93
NECAP1-220ENST00000639841 NREPQ16612 68 aa2.98□□□□□ -1.93
NECAP1-220ENST00000639841 NDUFB1O75438 58 aa2.97□□□□□ -1.93
NECAP1-220ENST00000639841 MACF1Q9UPN3 7388 aaKnown RBP2.97□□□□□ -1.93
NECAP1-220ENST00000639841 KRTAP20-1Q3LI63 56 aa2.94□□□□□ -1.94
NECAP1-220ENST00000639841 SYNE2Q8WXH0 6885 aaKnown RBP2.93□□□□□ -1.94
NECAP1-220ENST00000639841 NEBP20929 6669 aa2.91□□□□□ -1.94
NECAP1-220ENST00000639841 WFDC13Q8IUB5 93 aa2.91□□□□□ -1.94
NECAP1-220ENST00000639841 H1FX-AS1Q4G0G2 97 aa2.89□□□□□ -1.95
NECAP1-220ENST00000639841 KRTAP2-3P0C7H8 128 aa2.83□□□□□ -1.96
NECAP1-220ENST00000639841 KRTAP2-4Q9BYR9 128 aa2.83□□□□□ -1.96
NECAP1-220ENST00000639841 KRTAP12-4P60329 112 aa2.83□□□□□ -1.96
NECAP1-220ENST00000639841 KRTAP19-8Q3LI54 63 aa2.8□□□□□ -1.96
NECAP1-220ENST00000639841 CRIPTQ9P021 101 aa2.78□□□□□ -1.96
NECAP1-220ENST00000639841 K7EQZ3 153 aa2.78□□□□□ -1.97
NECAP1-220ENST00000639841 MRPL34Q9BQ48 92 aaKnown RBP2.78□□□□□ -1.97
NECAP1-220ENST00000639841 SPRR2GQ9BYE4 73 aa2.78□□□□□ -1.97
NECAP1-220ENST00000639841 KRTAP9-6A8MVA2 160 aa2.76□□□□□ -1.97
NECAP1-220ENST00000639841 MT1BP07438 61 aa2.75□□□□□ -1.97
NECAP1-220ENST00000639841 KRTAP5-8O75690 187 aa2.74□□□□□ -1.97
NECAP1-220ENST00000639841 KRTAP2-1Q9BYU5 128 aa2.72□□□□□ -1.97
NECAP1-220ENST00000639841 S4R3F8 94 aa2.72□□□□□ -1.97
NECAP1-220ENST00000639841 MMP24-AS1A0A0U1RRL7 71 aa2.72□□□□□ -1.97
NECAP1-220ENST00000639841 C10orf95Q9H7T3 257 aa2.7□□□□□ -1.98
NECAP1-220ENST00000639841 MUC12Q9UKN1 5478 aa2.7□□□□□ -1.98
NECAP1-220ENST00000639841 SPRR2EP22531 72 aa2.69□□□□□ -1.98
NECAP1-220ENST00000639841 SPRR2BP35325 72 aa2.69□□□□□ -1.98
NECAP1-220ENST00000639841 SPRR2AP35326 72 aa2.69□□□□□ -1.98
NECAP1-220ENST00000639841 UBL5Q9BZL1 73 aa2.69□□□□□ -1.98
NECAP1-220ENST00000639841 SPRR2FQ96RM1 72 aa2.67□□□□□ -1.98
NECAP1-220ENST00000639841 MDN1Q9NU22 5596 aa2.66□□□□□ -1.98
NECAP1-220ENST00000639841 KMT2DO14686 5537 aa2.66□□□□□ -1.98
NECAP1-220ENST00000639841 TP53AIP1Q9HCN2 124 aa2.65□□□□□ -1.98
NECAP1-220ENST00000639841 KRTAP12-3P60328 96 aa2.64□□□□□ -1.99
NECAP1-220ENST00000639841 H0YAA0 97 aa2.63□□□□□ -1.99
NECAP1-220ENST00000639841 KRTAP8-1Q8IUC2 63 aa2.63□□□□□ -1.99
NECAP1-220ENST00000639841 SPRR2DP22532 72 aa2.62□□□□□ -1.99
NECAP1-220ENST00000639841 MT1XP80297 61 aa2.53□□□□□ -2
NECAP1-220ENST00000639841 A0A0D9SG42 100 aa2.52□□□□□ -2.01
NECAP1-220ENST00000639841 M0QZ58 72 aa2.43□□□□□ -2.02
NECAP1-220ENST00000639841 AHNAKQ09666 5890 aaKnown RBP2.43□□□□□ -2.02
NECAP1-220ENST00000639841 KRTAP19-3Q7Z4W3 81 aa2.34□□□□□ -2.04
NECAP1-220ENST00000639841 LCE3AQ5TA76 89 aa2.32□□□□□ -2.04
NECAP1-220ENST00000639841 MT1GP13640 62 aa2.29□□□□□ -2.04
NECAP1-220ENST00000639841 MT1EP04732 61 aa2.29□□□□□ -2.04
NECAP1-220ENST00000639841 KRTAP5-10Q6L8G5 202 aa2.28□□□□□ -2.04
NECAP1-220ENST00000639841 KRTAP5-7Q6L8G8 165 aa2.27□□□□□ -2.05
NECAP1-220ENST00000639841 KRTAP5-5Q701N2 237 aaPredicted RBP2.27□□□□□ -2.05
NECAP1-220ENST00000639841 KRTAP19-7Q3SYF9 63 aa2.26□□□□□ -2.05
NECAP1-220ENST00000639841 AHNAK2Q8IVF2 5795 aa2.25□□□□□ -2.05
NECAP1-220ENST00000639841 MT4P47944 62 aa2.24□□□□□ -2.05
NECAP1-220ENST00000639841 DSTQ03001 7570 aaKnown RBP2.24□□□□□ -2.05
NECAP1-220ENST00000639841 MT1MQ8N339 61 aa2.19□□□□□ -2.06
NECAP1-220ENST00000639841 KRTAP19-5Q3LI72 72 aa2.15□□□□□ -2.07
NECAP1-220ENST00000639841 MT1LQ93083 61 aa2.14□□□□□ -2.07
NECAP1-220ENST00000639841 LCE1CQ5T751 118 aa2.12□□□□□ -2.07
NECAP1-220ENST00000639841 LCE1BQ5T7P3 118 aa2.12□□□□□ -2.07
NECAP1-220ENST00000639841 KRTAP20-2Q3LI61 65 aa2.1□□□□□ -2.07
NECAP1-220ENST00000639841 TNP1P09430 55 aa2.07□□□□□ -2.08
NECAP1-220ENST00000639841 MUC5ACP98088 5654 aa1.93□□□□□ -2.1
NECAP1-220ENST00000639841 MT1AP04731 61 aa1.87□□□□□ -2.11
NECAP1-220ENST00000639841 SYNE1Q8NF91 8797 aaKnown RBP1.86□□□□□ -2.11
NECAP1-220ENST00000639841 MUC19Q7Z5P9 8384 aa1.86□□□□□ -2.11
NECAP1-220ENST00000639841 KRTAP6-1Q3LI64 71 aa1.78□□□□□ -2.12
NECAP1-220ENST00000639841 KRTAP6-2Q3LI66 62 aa1.75□□□□□ -2.13
NECAP1-220ENST00000639841 KRTAP21-2Q3LI59 83 aa1.58□□□□□ -2.16
NECAP1-220ENST00000639841 PRM1P04553 51 aa1.5□□□□□ -2.17
NECAP1-220ENST00000639841 PHGR1C9JFL3 82 aa1.34□□□□□ -2.19
NECAP1-220ENST00000639841 KRTAP21-1Q3LI58 79 aa1.29□□□□□ -2.2
NECAP1-220ENST00000639841 MUC16Q8WXI7 14507 aa0.86□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 36.8 ms