RNA–Protein interactions for RNA: ENST00000639738.1

SCARB2-219, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 1,517 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-219ENST00000639738 SPRR2AP35326 72 aa7.71□□□□□ -1.18
SCARB2-219ENST00000639738 KRTAP2-3P0C7H8 128 aa7.7□□□□□ -1.18
SCARB2-219ENST00000639738 KRTAP2-4Q9BYR9 128 aa7.7□□□□□ -1.18
SCARB2-219ENST00000639738 MT1EP04732 61 aa7.66□□□□□ -1.18
SCARB2-219ENST00000639738 KRTAP12-3P60328 96 aa7.64□□□□□ -1.19
SCARB2-219ENST00000639738 LCE1AQ5T7P2 110 aa7.58□□□□□ -1.2
SCARB2-219ENST00000639738 LOC100996750A0A140TA64 210 aa7.47□□□□□ -1.21
SCARB2-219ENST00000639738 KRTAP4-6Q9BYQ5 205 aa7.47□□□□□ -1.21
SCARB2-219ENST00000639738 SPRR2DP22532 72 aa7.45□□□□□ -1.22
SCARB2-219ENST00000639738 MT1LQ93083 61 aa7.45□□□□□ -1.22
SCARB2-219ENST00000639738 KRTAP2-2Q9BYT5 123 aa7.45□□□□□ -1.22
SCARB2-219ENST00000639738 KRTAP2-1Q9BYU5 128 aa7.45□□□□□ -1.22
SCARB2-219ENST00000639738 KRTAP15-1Q3LI76 137 aa7.42□□□□□ -1.22
SCARB2-219ENST00000639738 KRTAP19-3Q7Z4W3 81 aa7.4□□□□□ -1.22
SCARB2-219ENST00000639738 LCE5AQ5TCM9 118 aa7.35□□□□□ -1.23
SCARB2-219ENST00000639738 MT1GP13640 62 aa7.31□□□□□ -1.24
SCARB2-219ENST00000639738 SVIPQ8NHG7 77 aa7.3□□□□□ -1.24
SCARB2-219ENST00000639738 LCE3BQ5TA77 95 aa7.27□□□□□ -1.25
SCARB2-219ENST00000639738 MT1MQ8N339 61 aa7.22□□□□□ -1.25
SCARB2-219ENST00000639738 KRTAP19-4Q3LI73 84 aa7.22□□□□□ -1.25
SCARB2-219ENST00000639738 KRTAP4-7Q9BYR0 210 aa7.17□□□□□ -1.26
SCARB2-219ENST00000639738 LCE3CQ5T5A8 94 aa7.14□□□□□ -1.27
SCARB2-219ENST00000639738 KRTAP4-3Q9BYR4 195 aa7.07□□□□□ -1.28
SCARB2-219ENST00000639738 DSTQ03001 7570 aaKnown RBP6.9□□□□□ -1.3
SCARB2-219ENST00000639738 SPRR5A0A1B0GTR4 108 aa6.86□□□□□ -1.31
SCARB2-219ENST00000639738 KRTAP9-6A8MVA2 160 aa6.81□□□□□ -1.32
SCARB2-219ENST00000639738 KRTAP4-9Q9BYQ8 210 aa6.8□□□□□ -1.32
SCARB2-219ENST00000639738 LCE1DQ5T752 114 aa6.64□□□□□ -1.35
SCARB2-219ENST00000639738 KRTAP5-5Q701N2 237 aaPredicted RBP6.6□□□□□ -1.35
SCARB2-219ENST00000639738 GPR98Q8WXG9 6306 aa6.59□□□□□ -1.35
SCARB2-219ENST00000639738 LCE4AQ5TA78 99 aa6.56□□□□□ -1.36
SCARB2-219ENST00000639738 MT4P47944 62 aa6.53□□□□□ -1.36
SCARB2-219ENST00000639738 HMCN1Q96RW7 5635 aa6.5□□□□□ -1.37
SCARB2-219ENST00000639738 KRTAP4-12Q9BQ66 201 aa6.49□□□□□ -1.37
SCARB2-219ENST00000639738 KRTAP5-4Q6L8H1 288 aa6.46□□□□□ -1.37
SCARB2-219ENST00000639738 KRTAP9-9Q9BYP9 154 aa6.35□□□□□ -1.39
SCARB2-219ENST00000639738 KRTAP9-4Q9BYQ2 154 aa6.35□□□□□ -1.39
SCARB2-219ENST00000639738 MT1AP04731 61 aa6.33□□□□□ -1.4
SCARB2-219ENST00000639738 KRTAP6-1Q3LI64 71 aa6.28□□□□□ -1.4
SCARB2-219ENST00000639738 AHNAK2Q8IVF2 5795 aa6.26□□□□□ -1.41
SCARB2-219ENST00000639738 KRTAP5-10Q6L8G5 202 aa6.25□□□□□ -1.41
SCARB2-219ENST00000639738 LUZP6Q538Z0 58 aa6.23□□□□□ -1.41
SCARB2-219ENST00000639738 SYNE1Q8NF91 8797 aaKnown RBP6.23□□□□□ -1.41
SCARB2-219ENST00000639738 KRTAP12-4P60329 112 aa6.09□□□□□ -1.44
SCARB2-219ENST00000639738 KRTAP20-2Q3LI61 65 aa6.09□□□□□ -1.44
SCARB2-219ENST00000639738 KRTAP5-3Q6L8H2 238 aa6.06□□□□□ -1.44
SCARB2-219ENST00000639738 KRTAP5-7Q6L8G8 165 aa6.02□□□□□ -1.45
SCARB2-219ENST00000639738 NDUFAF8A1L188 74 aa5.92□□□□□ -1.46
SCARB2-219ENST00000639738 KRTAP6-2Q3LI66 62 aa5.82□□□□□ -1.48
SCARB2-219ENST00000639738 KRTAP5-2Q701N4 177 aa5.81□□□□□ -1.48
SCARB2-219ENST00000639738 KRTAP4-2Q9BYR5 136 aa5.8□□□□□ -1.48
SCARB2-219ENST00000639738 H3BS24 57 aa5.77□□□□□ -1.49
SCARB2-219ENST00000639738 MT3P25713 68 aa5.71□□□□□ -1.5
SCARB2-219ENST00000639738 KRTAP4-11Q9BYQ6 195 aa5.66□□□□□ -1.5
SCARB2-219ENST00000639738 KRTAP5-8O75690 187 aa5.41□□□□□ -1.54
SCARB2-219ENST00000639738 A0A0A0MQY5 61 aa5.33□□□□□ -1.56
SCARB2-219ENST00000639738 OBSCNQ5VST9 7968 aa5.28□□□□□ -1.56
SCARB2-219ENST00000639738 LCE3DQ9BYE3 92 aa5.28□□□□□ -1.56
SCARB2-219ENST00000639738 MUC5ACP98088 5654 aa5.19□□□□□ -1.58
SCARB2-219ENST00000639738 MUC5BQ9HC84 5762 aaPredicted RBP5.18□□□□□ -1.58
SCARB2-219ENST00000639738 AHNAKQ09666 5890 aaKnown RBP5.1□□□□□ -1.59
SCARB2-219ENST00000639738 LCE3EQ5T5B0 92 aa5.09□□□□□ -1.59
SCARB2-219ENST00000639738 LCE1EQ5T753 118 aa5.08□□□□□ -1.6
SCARB2-219ENST00000639738 KRTAP5-1Q6L8H4 278 aa5.06□□□□□ -1.6
SCARB2-219ENST00000639738 INE1O15225 51 aa4.87□□□□□ -1.63
SCARB2-219ENST00000639738 LCE1CQ5T751 118 aa4.73□□□□□ -1.65
SCARB2-219ENST00000639738 LCE1BQ5T7P3 118 aa4.73□□□□□ -1.65
SCARB2-219ENST00000639738 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.43□□□□□ -1.7
SCARB2-219ENST00000639738 PRM1P04553 51 aa4.29□□□□□ -1.72
SCARB2-219ENST00000639738 KRTAP5-11Q6L8G4 156 aa4.21□□□□□ -1.73
SCARB2-219ENST00000639738 KRTAP21-2Q3LI59 83 aa4.16□□□□□ -1.74
SCARB2-219ENST00000639738 LCE1FQ5T754 118 aa3.95□□□□□ -1.78
SCARB2-219ENST00000639738 KRTAP4-4Q9BYR3 166 aa3.65□□□□□ -1.82
SCARB2-219ENST00000639738 PHGR1C9JFL3 82 aa3.64□□□□□ -1.83
SCARB2-219ENST00000639738 MUC19Q7Z5P9 8384 aa3.22□□□□□ -1.89
SCARB2-219ENST00000639738 KRTAP21-1Q3LI58 79 aa2.76□□□□□ -1.97
SCARB2-219ENST00000639738 MUC16Q8WXI7 14507 aa2.34□□□□□ -2.04
Retrieved 77 of 20,778 RNA–protein pairs in 10.5 ms