RNA–Protein interactions for RNA: ENST00000639730.1

KCNMA1-270, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5

Gene KCNMA1, Length 2,962 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-270ENST00000639730 MT1BP07438 61 aa3.11□□□□□ -1.91
KCNMA1-270ENST00000639730 LCE1DQ5T752 114 aa3.09□□□□□ -1.91
KCNMA1-270ENST00000639730 NEBP20929 6669 aa3.08□□□□□ -1.92
KCNMA1-270ENST00000639730 KRTAP4-7Q9BYR0 210 aa3.07□□□□□ -1.92
KCNMA1-270ENST00000639730 KRTAP10-5P60370 271 aa3.06□□□□□ -1.92
KCNMA1-270ENST00000639730 FCGBPQ9Y6R7 5405 aaPredicted RBP3.06□□□□□ -1.92
KCNMA1-270ENST00000639730 LCE4AQ5TA78 99 aa3.06□□□□□ -1.92
KCNMA1-270ENST00000639730 MT1XP80297 61 aa3.01□□□□□ -1.93
KCNMA1-270ENST00000639730 LCE1AQ5T7P2 110 aa3.01□□□□□ -1.93
KCNMA1-270ENST00000639730 KRTAP4-9Q9BYQ8 210 aa3.01□□□□□ -1.93
KCNMA1-270ENST00000639730 KRTAP8-1Q8IUC2 63 aa3□□□□□ -1.93
KCNMA1-270ENST00000639730 KMT2DO14686 5537 aa2.99□□□□□ -1.93
KCNMA1-270ENST00000639730 KRTAP2-2Q9BYT5 123 aa2.99□□□□□ -1.93
KCNMA1-270ENST00000639730 KRTAP2-1Q9BYU5 128 aa2.99□□□□□ -1.93
KCNMA1-270ENST00000639730 KRTAP12-3P60328 96 aa2.98□□□□□ -1.93
KCNMA1-270ENST00000639730 KRTAP10-12P60413 245 aa2.97□□□□□ -1.93
KCNMA1-270ENST00000639730 KRTAP4-2Q9BYR5 136 aa2.96□□□□□ -1.94
KCNMA1-270ENST00000639730 KRTAP4-11Q9BYQ6 195 aa2.91□□□□□ -1.94
KCNMA1-270ENST00000639730 KRTAP10-7P60409 375 aaPredicted RBP2.88□□□□□ -1.95
KCNMA1-270ENST00000639730 LCE5AQ5TCM9 118 aa2.85□□□□□ -1.95
KCNMA1-270ENST00000639730 MACF1Q9UPN3 7388 aaKnown RBP2.82□□□□□ -1.96
KCNMA1-270ENST00000639730 KRTAP9-6A8MVA2 160 aa2.81□□□□□ -1.96
KCNMA1-270ENST00000639730 LCE3CQ5T5A8 94 aa2.8□□□□□ -1.96
KCNMA1-270ENST00000639730 KRTAP19-5Q3LI72 72 aa2.79□□□□□ -1.96
KCNMA1-270ENST00000639730 SPRR2EP22531 72 aa2.79□□□□□ -1.96
KCNMA1-270ENST00000639730 SPRR2BP35325 72 aa2.79□□□□□ -1.96
KCNMA1-270ENST00000639730 SPRR2AP35326 72 aa2.79□□□□□ -1.96
KCNMA1-270ENST00000639730 SPRR2DP22532 72 aa2.74□□□□□ -1.97
KCNMA1-270ENST00000639730 SYNE2Q8WXH0 6885 aaKnown RBP2.73□□□□□ -1.97
KCNMA1-270ENST00000639730 MUC12Q9UKN1 5478 aa2.71□□□□□ -1.98
KCNMA1-270ENST00000639730 SPRR2FQ96RM1 72 aa2.68□□□□□ -1.98
KCNMA1-270ENST00000639730 KRTAP19-7Q3SYF9 63 aa2.68□□□□□ -1.98
KCNMA1-270ENST00000639730 DSTQ03001 7570 aaKnown RBP2.67□□□□□ -1.98
KCNMA1-270ENST00000639730 MT1EP04732 61 aa2.65□□□□□ -1.98
KCNMA1-270ENST00000639730 KRTAP5-3Q6L8H2 238 aa2.63□□□□□ -1.99
KCNMA1-270ENST00000639730 KRTAP5-7Q6L8G8 165 aa2.61□□□□□ -1.99
KCNMA1-270ENST00000639730 MT1LQ93083 61 aa2.6□□□□□ -1.99
KCNMA1-270ENST00000639730 MDN1Q9NU22 5596 aa2.58□□□□□ -2
KCNMA1-270ENST00000639730 MT1GP13640 62 aa2.58□□□□□ -2
KCNMA1-270ENST00000639730 KRTAP5-4Q6L8H1 288 aa2.57□□□□□ -2
KCNMA1-270ENST00000639730 KRTAP19-3Q7Z4W3 81 aa2.57□□□□□ -2
KCNMA1-270ENST00000639730 KRTAP12-4P60329 112 aa2.55□□□□□ -2
KCNMA1-270ENST00000639730 KRTAP5-10Q6L8G5 202 aa2.53□□□□□ -2
KCNMA1-270ENST00000639730 GPR98Q8WXG9 6306 aa2.53□□□□□ -2
KCNMA1-270ENST00000639730 MT1MQ8N339 61 aa2.5□□□□□ -2.01
KCNMA1-270ENST00000639730 KRTAP4-3Q9BYR4 195 aa2.48□□□□□ -2.01
KCNMA1-270ENST00000639730 SYNE1Q8NF91 8797 aaKnown RBP2.46□□□□□ -2.02
KCNMA1-270ENST00000639730 OBSCNQ5VST9 7968 aa2.45□□□□□ -2.02
KCNMA1-270ENST00000639730 MT3P25713 68 aa2.44□□□□□ -2.02
KCNMA1-270ENST00000639730 AHNAK2Q8IVF2 5795 aa2.39□□□□□ -2.03
KCNMA1-270ENST00000639730 MUC5BQ9HC84 5762 aaPredicted RBP2.34□□□□□ -2.04
KCNMA1-270ENST00000639730 AHNAKQ09666 5890 aaKnown RBP2.33□□□□□ -2.04
KCNMA1-270ENST00000639730 PRM1P04553 51 aa2.3□□□□□ -2.04
KCNMA1-270ENST00000639730 KRTAP5-5Q701N2 237 aaPredicted RBP2.3□□□□□ -2.04
KCNMA1-270ENST00000639730 HMCN1Q96RW7 5635 aa2.3□□□□□ -2.04
KCNMA1-270ENST00000639730 LCE1FQ5T754 118 aa2.29□□□□□ -2.04
KCNMA1-270ENST00000639730 KRTAP20-2Q3LI61 65 aa2.27□□□□□ -2.05
KCNMA1-270ENST00000639730 LCE1EQ5T753 118 aa2.25□□□□□ -2.05
KCNMA1-270ENST00000639730 MT1AP04731 61 aa2.25□□□□□ -2.05
KCNMA1-270ENST00000639730 KRTAP5-2Q701N4 177 aa2.24□□□□□ -2.05
KCNMA1-270ENST00000639730 LCE3DQ9BYE3 92 aa2.22□□□□□ -2.05
KCNMA1-270ENST00000639730 LCE3EQ5T5B0 92 aa2.2□□□□□ -2.06
KCNMA1-270ENST00000639730 MT4P47944 62 aa2.18□□□□□ -2.06
KCNMA1-270ENST00000639730 KRTAP6-1Q3LI64 71 aa2.17□□□□□ -2.06
KCNMA1-270ENST00000639730 KRTAP6-2Q3LI66 62 aa2.13□□□□□ -2.07
KCNMA1-270ENST00000639730 KRTAP5-8O75690 187 aa2.12□□□□□ -2.07
KCNMA1-270ENST00000639730 MUC5ACP98088 5654 aa2.02□□□□□ -2.09
KCNMA1-270ENST00000639730 KRTAP5-11Q6L8G4 156 aa1.98□□□□□ -2.09
KCNMA1-270ENST00000639730 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.97□□□□□ -2.09
KCNMA1-270ENST00000639730 KRTAP5-1Q6L8H4 278 aa1.95□□□□□ -2.1
KCNMA1-270ENST00000639730 MUC19Q7Z5P9 8384 aa1.92□□□□□ -2.1
KCNMA1-270ENST00000639730 LCE1CQ5T751 118 aa1.75□□□□□ -2.13
KCNMA1-270ENST00000639730 LCE1BQ5T7P3 118 aa1.75□□□□□ -2.13
KCNMA1-270ENST00000639730 KRTAP4-4Q9BYR3 166 aa1.66□□□□□ -2.14
KCNMA1-270ENST00000639730 KRTAP21-2Q3LI59 83 aa1.42□□□□□ -2.18
KCNMA1-270ENST00000639730 KRTAP21-1Q3LI58 79 aa1.4□□□□□ -2.19
KCNMA1-270ENST00000639730 PHGR1C9JFL3 82 aa1.35□□□□□ -2.19
KCNMA1-270ENST00000639730 MUC16Q8WXI7 14507 aa1.03□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 68.6 ms