RNA–Protein interactions for RNA: ENST00000639054.1

PAX6-250, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 2,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-250ENST00000639054 KRTAP4-2Q9BYR5 136 aa4.56□□□□□ -1.68
PAX6-250ENST00000639054 MACF1Q9UPN3 7388 aaKnown RBP4.56□□□□□ -1.68
PAX6-250ENST00000639054 LUZP6Q538Z0 58 aa4.52□□□□□ -1.69
PAX6-250ENST00000639054 PP632Q6XCG6 107 aa4.51□□□□□ -1.69
PAX6-250ENST00000639054 SYNE2Q8WXH0 6885 aaKnown RBP4.46□□□□□ -1.7
PAX6-250ENST00000639054 KRTAP8-1Q8IUC2 63 aa4.45□□□□□ -1.7
PAX6-250ENST00000639054 KRTAP19-5Q3LI72 72 aa4.42□□□□□ -1.7
PAX6-250ENST00000639054 KRTAP19-7Q3SYF9 63 aa4.39□□□□□ -1.71
PAX6-250ENST00000639054 KRTAP12-3P60328 96 aa4.36□□□□□ -1.71
PAX6-250ENST00000639054 MUC12Q9UKN1 5478 aa4.36□□□□□ -1.71
PAX6-250ENST00000639054 SPRR5A0A1B0GTR4 108 aa4.34□□□□□ -1.72
PAX6-250ENST00000639054 SPRR2FQ96RM1 72 aa4.34□□□□□ -1.72
PAX6-250ENST00000639054 MT1EP04732 61 aa4.3□□□□□ -1.72
PAX6-250ENST00000639054 KRTAP4-11Q9BYQ6 195 aa4.28□□□□□ -1.72
PAX6-250ENST00000639054 KRTAP5-9P26371 169 aa4.28□□□□□ -1.72
PAX6-250ENST00000639054 KRTAP6-3Q3LI67 103 aa4.26□□□□□ -1.73
PAX6-250ENST00000639054 MDN1Q9NU22 5596 aa4.25□□□□□ -1.73
PAX6-250ENST00000639054 KRTAP9-7A8MTY7 169 aa4.24□□□□□ -1.73
PAX6-250ENST00000639054 MT1LQ93083 61 aa4.2□□□□□ -1.74
PAX6-250ENST00000639054 LCE1AQ5T7P2 110 aa4.15□□□□□ -1.75
PAX6-250ENST00000639054 KRTAP19-3Q7Z4W3 81 aa4.15□□□□□ -1.75
PAX6-250ENST00000639054 SPRR2EP22531 72 aa4.14□□□□□ -1.75
PAX6-250ENST00000639054 SPRR2BP35325 72 aa4.14□□□□□ -1.75
PAX6-250ENST00000639054 SPRR2AP35326 72 aa4.14□□□□□ -1.75
PAX6-250ENST00000639054 LCE5AQ5TCM9 118 aa4.1□□□□□ -1.75
PAX6-250ENST00000639054 MT1GP13640 62 aa4.09□□□□□ -1.76
PAX6-250ENST00000639054 MT1MQ8N339 61 aa4.07□□□□□ -1.76
PAX6-250ENST00000639054 LCE3CQ5T5A8 94 aa4.06□□□□□ -1.76
PAX6-250ENST00000639054 KRTAP4-3Q9BYR4 195 aa4.06□□□□□ -1.76
PAX6-250ENST00000639054 NEBP20929 6669 aa4.01□□□□□ -1.77
PAX6-250ENST00000639054 DSTQ03001 7570 aaKnown RBP4□□□□□ -1.77
PAX6-250ENST00000639054 SPRR2DP22532 72 aa3.98□□□□□ -1.77
PAX6-250ENST00000639054 KRTAP19-4Q3LI73 84 aa3.96□□□□□ -1.78
PAX6-250ENST00000639054 INE1O15225 51 aa3.92□□□□□ -1.78
PAX6-250ENST00000639054 KRTAP9-6A8MVA2 160 aa3.9□□□□□ -1.79
PAX6-250ENST00000639054 KRTAP2-3P0C7H8 128 aa3.75□□□□□ -1.81
PAX6-250ENST00000639054 KRTAP2-4Q9BYR9 128 aa3.75□□□□□ -1.81
PAX6-250ENST00000639054 KRTAP20-1Q3LI63 56 aa3.73□□□□□ -1.81
PAX6-250ENST00000639054 KRTAP5-5Q701N2 237 aaPredicted RBP3.67□□□□□ -1.82
PAX6-250ENST00000639054 KRTAP2-2Q9BYT5 123 aa3.67□□□□□ -1.82
PAX6-250ENST00000639054 KRTAP2-1Q9BYU5 128 aa3.67□□□□□ -1.82
PAX6-250ENST00000639054 KRTAP6-1Q3LI64 71 aa3.57□□□□□ -1.84
PAX6-250ENST00000639054 SYNE1Q8NF91 8797 aaKnown RBP3.56□□□□□ -1.84
PAX6-250ENST00000639054 MT1AP04731 61 aa3.55□□□□□ -1.84
PAX6-250ENST00000639054 KRTAP5-4Q6L8H1 288 aa3.55□□□□□ -1.84
PAX6-250ENST00000639054 MT4P47944 62 aa3.5□□□□□ -1.85
PAX6-250ENST00000639054 LCE4AQ5TA78 99 aa3.5□□□□□ -1.85
PAX6-250ENST00000639054 HMCN1Q96RW7 5635 aa3.42□□□□□ -1.86
PAX6-250ENST00000639054 KRTAP12-4P60329 112 aa3.41□□□□□ -1.86
PAX6-250ENST00000639054 KRTAP20-2Q3LI61 65 aa3.35□□□□□ -1.87
PAX6-250ENST00000639054 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.31□□□□□ -1.88
PAX6-250ENST00000639054 KRTAP6-2Q3LI66 62 aa3.31□□□□□ -1.88
PAX6-250ENST00000639054 MT3P25713 68 aa3.21□□□□□ -1.9
PAX6-250ENST00000639054 KRTAP5-2Q701N4 177 aa3.19□□□□□ -1.9
PAX6-250ENST00000639054 OBSCNQ5VST9 7968 aa3.14□□□□□ -1.91
PAX6-250ENST00000639054 AHNAK2Q8IVF2 5795 aa3.07□□□□□ -1.92
PAX6-250ENST00000639054 LCE3DQ9BYE3 92 aa3.03□□□□□ -1.92
PAX6-250ENST00000639054 LCE1FQ5T754 118 aa2.95□□□□□ -1.94
PAX6-250ENST00000639054 LCE3EQ5T5B0 92 aa2.91□□□□□ -1.94
PAX6-250ENST00000639054 KRTAP5-10Q6L8G5 202 aa2.91□□□□□ -1.94
PAX6-250ENST00000639054 GPR98Q8WXG9 6306 aa2.84□□□□□ -1.95
PAX6-250ENST00000639054 KRTAP5-8O75690 187 aa2.82□□□□□ -1.96
PAX6-250ENST00000639054 PRM1P04553 51 aa2.81□□□□□ -1.96
PAX6-250ENST00000639054 KRTAP5-1Q6L8H4 278 aa2.8□□□□□ -1.96
PAX6-250ENST00000639054 LCE1EQ5T753 118 aa2.79□□□□□ -1.96
PAX6-250ENST00000639054 KRTAP5-11Q6L8G4 156 aa2.79□□□□□ -1.96
PAX6-250ENST00000639054 MUC5ACP98088 5654 aa2.72□□□□□ -1.97
PAX6-250ENST00000639054 LCE1BQ5T7P3 118 aa2.7□□□□□ -1.98
PAX6-250ENST00000639054 KRTAP5-7Q6L8G8 165 aa2.68□□□□□ -1.98
PAX6-250ENST00000639054 KRTAP4-4Q9BYR3 166 aa2.66□□□□□ -1.98
PAX6-250ENST00000639054 LCE1CQ5T751 118 aa2.61□□□□□ -1.99
PAX6-250ENST00000639054 MUC5BQ9HC84 5762 aaPredicted RBP2.5□□□□□ -2.01
PAX6-250ENST00000639054 AHNAKQ09666 5890 aaKnown RBP2.33□□□□□ -2.04
PAX6-250ENST00000639054 KRTAP21-2Q3LI59 83 aa2.33□□□□□ -2.04
PAX6-250ENST00000639054 PHGR1C9JFL3 82 aa2□□□□□ -2.09
PAX6-250ENST00000639054 MUC19Q7Z5P9 8384 aa1.88□□□□□ -2.11
PAX6-250ENST00000639054 KRTAP21-1Q3LI58 79 aa1.81□□□□□ -2.12
PAX6-250ENST00000639054 MUC16Q8WXI7 14507 aa1.3□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 33.8 ms