RNA–Protein interactions for RNA: ENST00000638755.1

PAX6-238, Transcript of paired box 6, human

TSL 5 BASIC

Gene PAX6, Length 1,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAX6-238	ENST00000638755	MT1M	Q8N339	61 aa		4.21	□□□□□ -1.74
PAX6-238	ENST00000638755	AHNAK	Q09666	5890 aa	Known RBP	4.19	□□□□□ -1.74
PAX6-238	ENST00000638755	KRTAP4-3	Q9BYR4	195 aa		4.18	□□□□□ -1.74
PAX6-238	ENST00000638755	ATP5E	P56381	51 aa	Predicted RBP	4.17	□□□□□ -1.74
PAX6-238	ENST00000638755	KRTAP20-2	Q3LI61	65 aa		4.17	□□□□□ -1.74
PAX6-238	ENST00000638755	KRTAP13-4	Q3LI77	160 aa		4.17	□□□□□ -1.74
PAX6-238	ENST00000638755	KRTAP19-5	Q3LI72	72 aa		4.14	□□□□□ -1.75
PAX6-238	ENST00000638755	SEC61G	P60059	68 aa		4.1	□□□□□ -1.75
PAX6-238	ENST00000638755	MUC5AC	P98088	5654 aa		4.1	□□□□□ -1.75
PAX6-238	ENST00000638755	MT1L	Q93083	61 aa		4.08	□□□□□ -1.76
PAX6-238	ENST00000638755	SERP1	Q9Y6X1	66 aa		4.08	□□□□□ -1.76
PAX6-238	ENST00000638755	SPATA8	Q6RVD6	105 aa		4.06	□□□□□ -1.76
PAX6-238	ENST00000638755	MUC5B	Q9HC84	5762 aa	Predicted RBP	4.04	□□□□□ -1.76
PAX6-238	ENST00000638755		A0A0D9SG42	100 aa		4.04	□□□□□ -1.76
PAX6-238	ENST00000638755		A0A1B0GU33	70 aa		4.04	□□□□□ -1.76
PAX6-238	ENST00000638755	CAMK2N1	Q7Z7J9	78 aa		4.04	□□□□□ -1.76
PAX6-238	ENST00000638755	RPS28	P62857	69 aa	Known RBP	4.02	□□□□□ -1.77
PAX6-238	ENST00000638755		A0A1B0GU69	56 aa		4	□□□□□ -1.77
PAX6-238	ENST00000638755	KRTAP12-4	P60329	112 aa		3.97	□□□□□ -1.77
PAX6-238	ENST00000638755	SPINT4	Q6UDR6	99 aa		3.96	□□□□□ -1.78
PAX6-238	ENST00000638755	SMIM26	A0A096LP01	95 aa		3.95	□□□□□ -1.78
PAX6-238	ENST00000638755		A8MU10	97 aa		3.95	□□□□□ -1.78
PAX6-238	ENST00000638755	KRTAP12-1	P59990	96 aa		3.95	□□□□□ -1.78
PAX6-238	ENST00000638755		V9GYY9	64 aa		3.93	□□□□□ -1.78
PAX6-238	ENST00000638755	LINC01558	Q9Y6Z2	57 aa		3.92	□□□□□ -1.78
PAX6-238	ENST00000638755	KRTAP5-5	Q701N2	237 aa	Predicted RBP	3.89	□□□□□ -1.79
PAX6-238	ENST00000638755	PRR15L	Q9BU68	103 aa		3.89	□□□□□ -1.79
PAX6-238	ENST00000638755	KRTAP5-8	O75690	187 aa		3.88	□□□□□ -1.79
PAX6-238	ENST00000638755		Q1T7F1	81 aa		3.86	□□□□□ -1.79
PAX6-238	ENST00000638755	SYNE1	Q8NF91	8797 aa	Known RBP	3.85	□□□□□ -1.79
PAX6-238	ENST00000638755		A0A0A0MQY5	61 aa		3.83	□□□□□ -1.8
PAX6-238	ENST00000638755	C10orf95	Q9H7T3	257 aa		3.81	□□□□□ -1.8
PAX6-238	ENST00000638755	PSPHP1	O15172	72 aa		3.79	□□□□□ -1.8
PAX6-238	ENST00000638755	UQCR11	O14957	56 aa		3.78	□□□□□ -1.8
PAX6-238	ENST00000638755	MIR22HG	Q0VDD5	57 aa		3.73	□□□□□ -1.81
PAX6-238	ENST00000638755	LCE3A	Q5TA76	89 aa		3.73	□□□□□ -1.81
PAX6-238	ENST00000638755	KRTAP15-1	Q3LI76	137 aa		3.71	□□□□□ -1.82
PAX6-238	ENST00000638755	PRO0628	Q9UI54	55 aa		3.71	□□□□□ -1.82
PAX6-238	ENST00000638755		A6NED7	52 aa		3.7	□□□□□ -1.82
PAX6-238	ENST00000638755	OBSCN	Q5VST9	7968 aa		3.69	□□□□□ -1.82
PAX6-238	ENST00000638755	KRTAP5-2	Q701N4	177 aa		3.69	□□□□□ -1.82
PAX6-238	ENST00000638755	TNP1	P09430	55 aa		3.68	□□□□□ -1.82
PAX6-238	ENST00000638755	BRK1	Q8WUW1	75 aa		3.68	□□□□□ -1.82
PAX6-238	ENST00000638755	CDC42SE1	Q9NRR8	79 aa		3.64	□□□□□ -1.83
PAX6-238	ENST00000638755	KRTAP23-1	A1A580	65 aa		3.59	□□□□□ -1.83
PAX6-238	ENST00000638755		K7ERS5	55 aa		3.58	□□□□□ -1.84
PAX6-238	ENST00000638755	KRTAP12-3	P60328	96 aa		3.57	□□□□□ -1.84
PAX6-238	ENST00000638755	PMAIP1	Q13794	54 aa		3.55	□□□□□ -1.84
PAX6-238	ENST00000638755	KRTAP25-1	Q3LHN0	102 aa		3.53	□□□□□ -1.84
PAX6-238	ENST00000638755	KRTAP6-1	Q3LI64	71 aa		3.5	□□□□□ -1.85
PAX6-238	ENST00000638755	KRTAP6-2	Q3LI66	62 aa		3.47	□□□□□ -1.85
PAX6-238	ENST00000638755	MT1A	P04731	61 aa		3.45	□□□□□ -1.86
PAX6-238	ENST00000638755	KRTAP5-1	Q6L8H4	278 aa		3.44	□□□□□ -1.86
PAX6-238	ENST00000638755	ROMO1	P60602	79 aa		3.41	□□□□□ -1.86
PAX6-238	ENST00000638755	KTN1-AS1	Q86SY8	53 aa		3.36	□□□□□ -1.87
PAX6-238	ENST00000638755	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.29	□□□□□ -1.88
PAX6-238	ENST00000638755	PRAC1	Q96KF2	57 aa		3.25	□□□□□ -1.89
PAX6-238	ENST00000638755	LCE3C	Q5T5A8	94 aa		3.24	□□□□□ -1.89
PAX6-238	ENST00000638755	KRTAP5-11	Q6L8G4	156 aa		3.22	□□□□□ -1.89
PAX6-238	ENST00000638755	MT3	P25713	68 aa		3.19	□□□□□ -1.9
PAX6-238	ENST00000638755	KRTAP9-6	A8MVA2	160 aa		3.12	□□□□□ -1.91
PAX6-238	ENST00000638755	LCE1E	Q5T753	118 aa		3.07	□□□□□ -1.92
PAX6-238	ENST00000638755	LUZP6	Q538Z0	58 aa		3.06	□□□□□ -1.92
PAX6-238	ENST00000638755	LCE1B	Q5T7P3	118 aa		3	□□□□□ -1.93
PAX6-238	ENST00000638755	LCE1C	Q5T751	118 aa		2.84	□□□□□ -1.95
PAX6-238	ENST00000638755	PHGR1	C9JFL3	82 aa		2.8	□□□□□ -1.96
PAX6-238	ENST00000638755	NDUFAF8	A1L188	74 aa		2.74	□□□□□ -1.97
PAX6-238	ENST00000638755	KRTAP4-4	Q9BYR3	166 aa		2.74	□□□□□ -1.97
PAX6-238	ENST00000638755	LCE1F	Q5T754	118 aa		2.68	□□□□□ -1.98
PAX6-238	ENST00000638755	INE1	O15225	51 aa		2.36	□□□□□ -2.03
PAX6-238	ENST00000638755	LCE3D	Q9BYE3	92 aa		2.36	□□□□□ -2.03
PAX6-238	ENST00000638755	MUC19	Q7Z5P9	8384 aa		2.31	□□□□□ -2.04
PAX6-238	ENST00000638755	KRTAP21-2	Q3LI59	83 aa		2.29	□□□□□ -2.04
PAX6-238	ENST00000638755	LCE3E	Q5T5B0	92 aa		2.23	□□□□□ -2.05
PAX6-238	ENST00000638755	KRTAP21-1	Q3LI58	79 aa		2.11	□□□□□ -2.07
PAX6-238	ENST00000638755	PRM1	P04553	51 aa		1.78	□□□□□ -2.12
PAX6-238	ENST00000638755	MUC16	Q8WXI7	14507 aa		1.58	□□□□□ -2.16

Retrieved 77 of 20,778 RNA–protein pairs in 249.2 ms