RNA–Protein interactions for RNA: ENST00000638546.1

HCG27-205, Transcript of HLA complex group 27, humanhuman

TSL 1 (best)

Gene HCG27, Length 1,641 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG27-205ENST00000638546 NEBP20929 6669 aa6.16□□□□□ -1.42
HCG27-205ENST00000638546 KRTAP4-7Q9BYR0 210 aa6.14□□□□□ -1.43
HCG27-205ENST00000638546 NDUFAF8A1L188 74 aa6.13□□□□□ -1.43
HCG27-205ENST00000638546 LUZP6Q538Z0 58 aa6.1□□□□□ -1.43
HCG27-205ENST00000638546 KMT2DO14686 5537 aa6.08□□□□□ -1.44
HCG27-205ENST00000638546 KRTAP19-7Q3SYF9 63 aa6.07□□□□□ -1.44
HCG27-205ENST00000638546 KRTAP20-1Q3LI63 56 aa6.02□□□□□ -1.45
HCG27-205ENST00000638546 KRTAP5-3Q6L8H2 238 aa5.97□□□□□ -1.45
HCG27-205ENST00000638546 MT1EP04732 61 aa5.96□□□□□ -1.46
HCG27-205ENST00000638546 KRTAP4-12Q9BQ66 201 aa5.95□□□□□ -1.46
HCG27-205ENST00000638546 MUC12Q9UKN1 5478 aa5.94□□□□□ -1.46
HCG27-205ENST00000638546 LCE3CQ5T5A8 94 aa5.94□□□□□ -1.46
HCG27-205ENST00000638546 KRTAP19-4Q3LI73 84 aa5.91□□□□□ -1.46
HCG27-205ENST00000638546 KRTAP4-2Q9BYR5 136 aa5.9□□□□□ -1.46
HCG27-205ENST00000638546 MT1LQ93083 61 aa5.87□□□□□ -1.47
HCG27-205ENST00000638546 KRTAP5-9P26371 169 aa5.85□□□□□ -1.47
HCG27-205ENST00000638546 LCE1DQ5T752 114 aa5.83□□□□□ -1.48
HCG27-205ENST00000638546 KRTAP4-9Q9BYQ8 210 aa5.79□□□□□ -1.48
HCG27-205ENST00000638546 KRTAP2-3P0C7H8 128 aa5.77□□□□□ -1.48
HCG27-205ENST00000638546 KRTAP2-4Q9BYR9 128 aa5.77□□□□□ -1.48
HCG27-205ENST00000638546 H3BS24 57 aa5.75□□□□□ -1.49
HCG27-205ENST00000638546 MDN1Q9NU22 5596 aa5.74□□□□□ -1.49
HCG27-205ENST00000638546 SPRR2FQ96RM1 72 aa5.73□□□□□ -1.49
HCG27-205ENST00000638546 KRTAP19-3Q7Z4W3 81 aa5.67□□□□□ -1.5
HCG27-205ENST00000638546 MT1GP13640 62 aa5.65□□□□□ -1.51
HCG27-205ENST00000638546 KRTAP9-6A8MVA2 160 aa5.61□□□□□ -1.51
HCG27-205ENST00000638546 MT1MQ8N339 61 aa5.59□□□□□ -1.51
HCG27-205ENST00000638546 SPRR2EP22531 72 aa5.58□□□□□ -1.52
HCG27-205ENST00000638546 SPRR2BP35325 72 aa5.58□□□□□ -1.52
HCG27-205ENST00000638546 SPRR2AP35326 72 aa5.58□□□□□ -1.52
HCG27-205ENST00000638546 KRTAP2-2Q9BYT5 123 aa5.56□□□□□ -1.52
HCG27-205ENST00000638546 KRTAP2-1Q9BYU5 128 aa5.56□□□□□ -1.52
HCG27-205ENST00000638546 LCE5AQ5TCM9 118 aa5.53□□□□□ -1.52
HCG27-205ENST00000638546 KRTAP4-3Q9BYR4 195 aa5.51□□□□□ -1.53
HCG27-205ENST00000638546 LCE1AQ5T7P2 110 aa5.49□□□□□ -1.53
HCG27-205ENST00000638546 A0A0A0MQY5 61 aa5.45□□□□□ -1.54
HCG27-205ENST00000638546 KRTAP4-11Q9BYQ6 195 aa5.42□□□□□ -1.54
HCG27-205ENST00000638546 SPRR2DP22532 72 aa5.41□□□□□ -1.54
HCG27-205ENST00000638546 GPR98Q8WXG9 6306 aa5.28□□□□□ -1.56
HCG27-205ENST00000638546 DSTQ03001 7570 aaKnown RBP5.14□□□□□ -1.59
HCG27-205ENST00000638546 INE1O15225 51 aa5.06□□□□□ -1.6
HCG27-205ENST00000638546 KRTAP5-5Q701N2 237 aaPredicted RBP5.01□□□□□ -1.61
HCG27-205ENST00000638546 MT1AP04731 61 aa4.98□□□□□ -1.61
HCG27-205ENST00000638546 KRTAP6-1Q3LI64 71 aa4.94□□□□□ -1.62
HCG27-205ENST00000638546 LCE4AQ5TA78 99 aa4.92□□□□□ -1.62
HCG27-205ENST00000638546 HMCN1Q96RW7 5635 aa4.77□□□□□ -1.65
HCG27-205ENST00000638546 AHNAK2Q8IVF2 5795 aa4.76□□□□□ -1.65
HCG27-205ENST00000638546 SYNE1Q8NF91 8797 aaKnown RBP4.74□□□□□ -1.65
HCG27-205ENST00000638546 MT4P47944 62 aa4.73□□□□□ -1.65
HCG27-205ENST00000638546 KRTAP5-10Q6L8G5 202 aa4.71□□□□□ -1.66
HCG27-205ENST00000638546 KRTAP5-4Q6L8H1 288 aa4.71□□□□□ -1.66
HCG27-205ENST00000638546 KRTAP12-4P60329 112 aa4.61□□□□□ -1.67
HCG27-205ENST00000638546 KRTAP5-7Q6L8G8 165 aa4.61□□□□□ -1.67
HCG27-205ENST00000638546 MT3P25713 68 aa4.52□□□□□ -1.69
HCG27-205ENST00000638546 KRTAP6-2Q3LI66 62 aa4.51□□□□□ -1.69
HCG27-205ENST00000638546 LCE3DQ9BYE3 92 aa4.5□□□□□ -1.69
HCG27-205ENST00000638546 KRTAP20-2Q3LI61 65 aa4.43□□□□□ -1.7
HCG27-205ENST00000638546 LCE3EQ5T5B0 92 aa4.4□□□□□ -1.7
HCG27-205ENST00000638546 KRTAP5-2Q701N4 177 aa4.28□□□□□ -1.72
HCG27-205ENST00000638546 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.23□□□□□ -1.73
HCG27-205ENST00000638546 OBSCNQ5VST9 7968 aa4.12□□□□□ -1.75
HCG27-205ENST00000638546 AHNAKQ09666 5890 aaKnown RBP4.1□□□□□ -1.75
HCG27-205ENST00000638546 MUC5ACP98088 5654 aa4.01□□□□□ -1.77
HCG27-205ENST00000638546 KRTAP5-8O75690 187 aa3.94□□□□□ -1.78
HCG27-205ENST00000638546 PRM1P04553 51 aa3.94□□□□□ -1.78
HCG27-205ENST00000638546 MUC5BQ9HC84 5762 aaPredicted RBP3.92□□□□□ -1.78
HCG27-205ENST00000638546 LCE1EQ5T753 118 aa3.85□□□□□ -1.79
HCG27-205ENST00000638546 KRTAP5-1Q6L8H4 278 aa3.7□□□□□ -1.82
HCG27-205ENST00000638546 KRTAP5-11Q6L8G4 156 aa3.66□□□□□ -1.82
HCG27-205ENST00000638546 LCE1BQ5T7P3 118 aa3.64□□□□□ -1.83
HCG27-205ENST00000638546 LCE1CQ5T751 118 aa3.59□□□□□ -1.83
HCG27-205ENST00000638546 KRTAP4-4Q9BYR3 166 aa3.54□□□□□ -1.84
HCG27-205ENST00000638546 KRTAP21-2Q3LI59 83 aa3.22□□□□□ -1.89
HCG27-205ENST00000638546 LCE1FQ5T754 118 aa3.15□□□□□ -1.9
HCG27-205ENST00000638546 PHGR1C9JFL3 82 aa2.76□□□□□ -1.97
HCG27-205ENST00000638546 KRTAP21-1Q3LI58 79 aa2.45□□□□□ -2.02
HCG27-205ENST00000638546 MUC19Q7Z5P9 8384 aa2.4□□□□□ -2.03
HCG27-205ENST00000638546 MUC16Q8WXI7 14507 aa1.81□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 40.2 ms