RNA–Protein interactions for RNA: ENST00000638031.1

CHRNA7-233, Transcript of cholinergic receptor nicotinic alpha 7 subunit, human

TSL 5

Gene CHRNA7, Length 1,133 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHRNA7-233	ENST00000638031	MT1M	Q8N339	61 aa		6.68	□□□□□ -1.34
CHRNA7-233	ENST00000638031	LINC01558	Q9Y6Z2	57 aa		6.67	□□□□□ -1.34
CHRNA7-233	ENST00000638031	TNP1	P09430	55 aa		6.63	□□□□□ -1.35
CHRNA7-233	ENST00000638031	KRTAP19-4	Q3LI73	84 aa		6.63	□□□□□ -1.35
CHRNA7-233	ENST00000638031		Q1T7F1	81 aa		6.62	□□□□□ -1.35
CHRNA7-233	ENST00000638031	PP632	Q6XCG6	107 aa		6.62	□□□□□ -1.35
CHRNA7-233	ENST00000638031		V9GYY9	64 aa		6.62	□□□□□ -1.35
CHRNA7-233	ENST00000638031	PRR15L	Q9BU68	103 aa		6.61	□□□□□ -1.35
CHRNA7-233	ENST00000638031	KRTAP4-3	Q9BYR4	195 aa		6.6	□□□□□ -1.35
CHRNA7-233	ENST00000638031	LCE1D	Q5T752	114 aa		6.59	□□□□□ -1.35
CHRNA7-233	ENST00000638031	HMCN1	Q96RW7	5635 aa		6.54	□□□□□ -1.36
CHRNA7-233	ENST00000638031	LCE4A	Q5TA78	99 aa		6.52	□□□□□ -1.37
CHRNA7-233	ENST00000638031	PSPHP1	O15172	72 aa		6.49	□□□□□ -1.37
CHRNA7-233	ENST00000638031	MT4	P47944	62 aa		6.48	□□□□□ -1.37
CHRNA7-233	ENST00000638031	KRTAP4-12	Q9BQ66	201 aa		6.48	□□□□□ -1.37
CHRNA7-233	ENST00000638031	UQCR11	O14957	56 aa		6.46	□□□□□ -1.38
CHRNA7-233	ENST00000638031	KRTAP4-7	Q9BYR0	210 aa		6.45	□□□□□ -1.38
CHRNA7-233	ENST00000638031	SVIP	Q8NHG7	77 aa		6.43	□□□□□ -1.38
CHRNA7-233	ENST00000638031	KRTAP23-1	A1A580	65 aa		6.42	□□□□□ -1.38
CHRNA7-233	ENST00000638031	KRTAP12-3	P60328	96 aa		6.42	□□□□□ -1.38
CHRNA7-233	ENST00000638031	KRTAP5-4	Q6L8H1	288 aa		6.42	□□□□□ -1.38
CHRNA7-233	ENST00000638031	AHNAK2	Q8IVF2	5795 aa		6.37	□□□□□ -1.39
CHRNA7-233	ENST00000638031	MIR22HG	Q0VDD5	57 aa		6.32	□□□□□ -1.4
CHRNA7-233	ENST00000638031		A6NED7	52 aa		6.3	□□□□□ -1.4
CHRNA7-233	ENST00000638031	KRTAP25-1	Q3LHN0	102 aa		6.25	□□□□□ -1.41
CHRNA7-233	ENST00000638031	KRTAP5-10	Q6L8G5	202 aa		6.2	□□□□□ -1.42
CHRNA7-233	ENST00000638031	CDC42SE1	Q9NRR8	79 aa		6.18	□□□□□ -1.42
CHRNA7-233	ENST00000638031	KRTAP5-5	Q701N2	237 aa	Predicted RBP	6.17	□□□□□ -1.42
CHRNA7-233	ENST00000638031	KRTAP9-9	Q9BYP9	154 aa		6.11	□□□□□ -1.43
CHRNA7-233	ENST00000638031	KRTAP9-4	Q9BYQ2	154 aa		6.11	□□□□□ -1.43
CHRNA7-233	ENST00000638031		K7ERS5	55 aa		6.1	□□□□□ -1.43
CHRNA7-233	ENST00000638031	BRK1	Q8WUW1	75 aa		6.09	□□□□□ -1.43
CHRNA7-233	ENST00000638031	KRTAP20-2	Q3LI61	65 aa		6.05	□□□□□ -1.44
CHRNA7-233	ENST00000638031	KRTAP5-3	Q6L8H2	238 aa		6.02	□□□□□ -1.45
CHRNA7-233	ENST00000638031	SPRR5	A0A1B0GTR4	108 aa		5.99	□□□□□ -1.45
CHRNA7-233	ENST00000638031	KRTAP15-1	Q3LI76	137 aa		5.98	□□□□□ -1.45
CHRNA7-233	ENST00000638031	KRTAP5-7	Q6L8G8	165 aa		5.97	□□□□□ -1.45
CHRNA7-233	ENST00000638031	KRTAP12-4	P60329	112 aa		5.93	□□□□□ -1.46
CHRNA7-233	ENST00000638031	LCE3C	Q5T5A8	94 aa		5.93	□□□□□ -1.46
CHRNA7-233	ENST00000638031	PRO0628	Q9UI54	55 aa		5.89	□□□□□ -1.47
CHRNA7-233	ENST00000638031	SYNE1	Q8NF91	8797 aa	Known RBP	5.89	□□□□□ -1.47
CHRNA7-233	ENST00000638031	ROMO1	P60602	79 aa		5.79	□□□□□ -1.48
CHRNA7-233	ENST00000638031	PMAIP1	Q13794	54 aa		5.77	□□□□□ -1.49
CHRNA7-233	ENST00000638031	KRTAP6-1	Q3LI64	71 aa		5.7	□□□□□ -1.5
CHRNA7-233	ENST00000638031	KRTAP9-6	A8MVA2	160 aa		5.69	□□□□□ -1.5
CHRNA7-233	ENST00000638031	MT1A	P04731	61 aa		5.68	□□□□□ -1.5
CHRNA7-233	ENST00000638031	KRTAP5-2	Q701N4	177 aa		5.61	□□□□□ -1.51
CHRNA7-233	ENST00000638031		A0A0A0MQY5	61 aa		5.58	□□□□□ -1.52
CHRNA7-233	ENST00000638031	KRTAP4-11	Q9BYQ6	195 aa		5.55	□□□□□ -1.52
CHRNA7-233	ENST00000638031	KTN1-AS1	Q86SY8	53 aa		5.48	□□□□□ -1.53
CHRNA7-233	ENST00000638031	KRTAP6-2	Q3LI66	62 aa		5.43	□□□□□ -1.54
CHRNA7-233	ENST00000638031	PRAC1	Q96KF2	57 aa		5.42	□□□□□ -1.54
CHRNA7-233	ENST00000638031	KRTAP4-2	Q9BYR5	136 aa		5.41	□□□□□ -1.54
CHRNA7-233	ENST00000638031	KRTAP5-8	O75690	187 aa		5.39	□□□□□ -1.55
CHRNA7-233	ENST00000638031	AHNAK	Q09666	5890 aa	Known RBP	5.3	□□□□□ -1.56
CHRNA7-233	ENST00000638031	MUC5B	Q9HC84	5762 aa	Predicted RBP	5.27	□□□□□ -1.57
CHRNA7-233	ENST00000638031	OBSCN	Q5VST9	7968 aa		5.25	□□□□□ -1.57
CHRNA7-233	ENST00000638031	MUC5AC	P98088	5654 aa		5.24	□□□□□ -1.57
CHRNA7-233	ENST00000638031	MT3	P25713	68 aa		5.17	□□□□□ -1.58
CHRNA7-233	ENST00000638031	KRTAP5-1	Q6L8H4	278 aa		5.05	□□□□□ -1.6
CHRNA7-233	ENST00000638031	LCE1E	Q5T753	118 aa		4.76	□□□□□ -1.65
CHRNA7-233	ENST00000638031	LCE1B	Q5T7P3	118 aa		4.49	□□□□□ -1.69
CHRNA7-233	ENST00000638031	LUZP6	Q538Z0	58 aa		4.45	□□□□□ -1.7
CHRNA7-233	ENST00000638031	LCE1C	Q5T751	118 aa		4.43	□□□□□ -1.7
CHRNA7-233	ENST00000638031	NDUFAF8	A1L188	74 aa		4.34	□□□□□ -1.71
CHRNA7-233	ENST00000638031	LCE3D	Q9BYE3	92 aa		4.24	□□□□□ -1.73
CHRNA7-233	ENST00000638031	LCE1F	Q5T754	118 aa		4.14	□□□□□ -1.75
CHRNA7-233	ENST00000638031	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	4.04	□□□□□ -1.76
CHRNA7-233	ENST00000638031	KRTAP5-11	Q6L8G4	156 aa		4.01	□□□□□ -1.77
CHRNA7-233	ENST00000638031	LCE3E	Q5T5B0	92 aa		3.98	□□□□□ -1.77
CHRNA7-233	ENST00000638031	KRTAP21-2	Q3LI59	83 aa		3.77	□□□□□ -1.81
CHRNA7-233	ENST00000638031	PHGR1	C9JFL3	82 aa		3.59	□□□□□ -1.83
CHRNA7-233	ENST00000638031	INE1	O15225	51 aa		3.5	□□□□□ -1.85
CHRNA7-233	ENST00000638031	KRTAP4-4	Q9BYR3	166 aa		3.46	□□□□□ -1.86
CHRNA7-233	ENST00000638031	MUC19	Q7Z5P9	8384 aa		3.25	□□□□□ -1.89
CHRNA7-233	ENST00000638031	PRM1	P04553	51 aa		2.98	□□□□□ -1.93
CHRNA7-233	ENST00000638031	KRTAP21-1	Q3LI58	79 aa		2.72	□□□□□ -1.97
CHRNA7-233	ENST00000638031	MUC16	Q8WXI7	14507 aa		2.24	□□□□□ -2.05

Retrieved 78 of 20,778 RNA–protein pairs in 87.5 ms