RNA–Protein interactions for RNA: ENST00000637952.1

CACNA1A-254, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 3,894 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-254ENST00000637952 KRTAP8-1Q8IUC2 63 aa3.45□□□□□ -1.86
CACNA1A-254ENST00000637952 KRTAP19-6Q3LI70 58 aa3.44□□□□□ -1.86
CACNA1A-254ENST00000637952 PP632Q6XCG6 107 aa3.44□□□□□ -1.86
CACNA1A-254ENST00000637952 LCE5AQ5TCM9 118 aa3.4□□□□□ -1.86
CACNA1A-254ENST00000637952 KRTAP5-3Q6L8H2 238 aa3.39□□□□□ -1.87
CACNA1A-254ENST00000637952 KRTAP10-7P60409 375 aaPredicted RBP3.38□□□□□ -1.87
CACNA1A-254ENST00000637952 KRTAP6-3Q3LI67 103 aa3.38□□□□□ -1.87
CACNA1A-254ENST00000637952 LCE3AQ5TA76 89 aa3.36□□□□□ -1.87
CACNA1A-254ENST00000637952 SPRR2FQ96RM1 72 aa3.36□□□□□ -1.87
CACNA1A-254ENST00000637952 SSPOA2VEC9 5147 aa3.36□□□□□ -1.87
CACNA1A-254ENST00000637952 KRTAP2-2Q9BYT5 123 aa3.3□□□□□ -1.88
CACNA1A-254ENST00000637952 FCGBPQ9Y6R7 5405 aaPredicted RBP3.3□□□□□ -1.88
CACNA1A-254ENST00000637952 KRTAP12-3P60328 96 aa3.29□□□□□ -1.88
CACNA1A-254ENST00000637952 KRTAP19-5Q3LI72 72 aa3.23□□□□□ -1.89
CACNA1A-254ENST00000637952 MACF1Q9UPN3 7388 aaKnown RBP3.22□□□□□ -1.89
CACNA1A-254ENST00000637952 SYNE2Q8WXH0 6885 aaKnown RBP3.21□□□□□ -1.89
CACNA1A-254ENST00000637952 SPRR2EP22531 72 aa3.2□□□□□ -1.9
CACNA1A-254ENST00000637952 SPRR2BP35325 72 aa3.2□□□□□ -1.9
CACNA1A-254ENST00000637952 SPRR2AP35326 72 aa3.2□□□□□ -1.9
CACNA1A-254ENST00000637952 KRTAP19-4Q3LI73 84 aa3.16□□□□□ -1.9
CACNA1A-254ENST00000637952 KMT2DO14686 5537 aa3.15□□□□□ -1.9
CACNA1A-254ENST00000637952 KRTAP20-1Q3LI63 56 aa3.11□□□□□ -1.91
CACNA1A-254ENST00000637952 KRTAP2-3P0C7H8 128 aa3.11□□□□□ -1.91
CACNA1A-254ENST00000637952 KRTAP2-4Q9BYR9 128 aa3.11□□□□□ -1.91
CACNA1A-254ENST00000637952 LCE1AQ5T7P2 110 aa3.1□□□□□ -1.91
CACNA1A-254ENST00000637952 SPRR2DP22532 72 aa3.09□□□□□ -1.92
CACNA1A-254ENST00000637952 MT1EP04732 61 aa3.06□□□□□ -1.92
CACNA1A-254ENST00000637952 MT1GP13640 62 aa3.04□□□□□ -1.92
CACNA1A-254ENST00000637952 KRTAP5-9P26371 169 aa3.04□□□□□ -1.92
CACNA1A-254ENST00000637952 KRTAP19-7Q3SYF9 63 aa3.04□□□□□ -1.92
CACNA1A-254ENST00000637952 KRTAP19-3Q7Z4W3 81 aa3.04□□□□□ -1.92
CACNA1A-254ENST00000637952 MUC12Q9UKN1 5478 aa3.02□□□□□ -1.93
CACNA1A-254ENST00000637952 MT1LQ93083 61 aa2.99□□□□□ -1.93
CACNA1A-254ENST00000637952 LCE3CQ5T5A8 94 aa2.97□□□□□ -1.93
CACNA1A-254ENST00000637952 KRTAP2-1Q9BYU5 128 aa2.96□□□□□ -1.94
CACNA1A-254ENST00000637952 DSTQ03001 7570 aaKnown RBP2.96□□□□□ -1.94
CACNA1A-254ENST00000637952 NEBP20929 6669 aa2.95□□□□□ -1.94
CACNA1A-254ENST00000637952 MT1MQ8N339 61 aa2.93□□□□□ -1.94
CACNA1A-254ENST00000637952 MDN1Q9NU22 5596 aa2.9□□□□□ -1.95
CACNA1A-254ENST00000637952 KRTAP4-3Q9BYR4 195 aa2.89□□□□□ -1.95
CACNA1A-254ENST00000637952 GPR98Q8WXG9 6306 aa2.88□□□□□ -1.95
CACNA1A-254ENST00000637952 LCE1FQ5T754 118 aa2.83□□□□□ -1.96
CACNA1A-254ENST00000637952 LCE1EQ5T753 118 aa2.82□□□□□ -1.96
CACNA1A-254ENST00000637952 SYNE1Q8NF91 8797 aaKnown RBP2.75□□□□□ -1.97
CACNA1A-254ENST00000637952 KRTAP12-4P60329 112 aa2.74□□□□□ -1.97
CACNA1A-254ENST00000637952 MT4P47944 62 aa2.73□□□□□ -1.97
CACNA1A-254ENST00000637952 KRTAP9-6A8MVA2 160 aa2.69□□□□□ -1.98
CACNA1A-254ENST00000637952 OBSCNQ5VST9 7968 aa2.69□□□□□ -1.98
CACNA1A-254ENST00000637952 MT1AP04731 61 aa2.58□□□□□ -2
CACNA1A-254ENST00000637952 KRTAP6-1Q3LI64 71 aa2.53□□□□□ -2
CACNA1A-254ENST00000637952 KRTAP5-7Q6L8G8 165 aa2.53□□□□□ -2
CACNA1A-254ENST00000637952 MT3P25713 68 aa2.47□□□□□ -2.01
CACNA1A-254ENST00000637952 KRTAP5-10Q6L8G5 202 aa2.46□□□□□ -2.02
CACNA1A-254ENST00000637952 KRTAP5-4Q6L8H1 288 aa2.45□□□□□ -2.02
CACNA1A-254ENST00000637952 KRTAP5-5Q701N2 237 aaPredicted RBP2.44□□□□□ -2.02
CACNA1A-254ENST00000637952 KRTAP5-11Q6L8G4 156 aa2.43□□□□□ -2.02
CACNA1A-254ENST00000637952 KRTAP6-2Q3LI66 62 aa2.42□□□□□ -2.02
CACNA1A-254ENST00000637952 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.4□□□□□ -2.02
CACNA1A-254ENST00000637952 KRTAP20-2Q3LI61 65 aa2.39□□□□□ -2.03
CACNA1A-254ENST00000637952 LCE3DQ9BYE3 92 aa2.35□□□□□ -2.03
CACNA1A-254ENST00000637952 HMCN1Q96RW7 5635 aa2.34□□□□□ -2.03
CACNA1A-254ENST00000637952 AHNAK2Q8IVF2 5795 aa2.31□□□□□ -2.04
CACNA1A-254ENST00000637952 MUC5BQ9HC84 5762 aaPredicted RBP2.29□□□□□ -2.04
CACNA1A-254ENST00000637952 AHNAKQ09666 5890 aaKnown RBP2.27□□□□□ -2.05
CACNA1A-254ENST00000637952 MUC19Q7Z5P9 8384 aa2.27□□□□□ -2.05
CACNA1A-254ENST00000637952 LCE3EQ5T5B0 92 aa2.26□□□□□ -2.05
CACNA1A-254ENST00000637952 PRM1P04553 51 aa2.22□□□□□ -2.05
CACNA1A-254ENST00000637952 LCE1BQ5T7P3 118 aa2.21□□□□□ -2.06
CACNA1A-254ENST00000637952 KRTAP5-1Q6L8H4 278 aa2.21□□□□□ -2.06
CACNA1A-254ENST00000637952 KRTAP5-2Q701N4 177 aa2.11□□□□□ -2.07
CACNA1A-254ENST00000637952 KRTAP4-4Q9BYR3 166 aa2.11□□□□□ -2.07
CACNA1A-254ENST00000637952 KRTAP5-8O75690 187 aa2.09□□□□□ -2.07
CACNA1A-254ENST00000637952 MUC5ACP98088 5654 aa2.04□□□□□ -2.08
CACNA1A-254ENST00000637952 LCE1CQ5T751 118 aa1.84□□□□□ -2.11
CACNA1A-254ENST00000637952 KRTAP21-1Q3LI58 79 aa1.72□□□□□ -2.13
CACNA1A-254ENST00000637952 KRTAP21-2Q3LI59 83 aa1.55□□□□□ -2.16
CACNA1A-254ENST00000637952 PHGR1C9JFL3 82 aa1.39□□□□□ -2.19
CACNA1A-254ENST00000637952 MUC16Q8WXI7 14507 aa0.99□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 39.5 ms